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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0349000 |
Transcript ID | LotjaGi2g1v0349000.4 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | ABC(ATP-binding) family transporter; TAIR: AT4G19210.1 RNAse l inhibitor protein 2; Swiss-Prot: sp|Q8LPJ4|AB2E_ARATH ABC transporter E family member 2; TrEMBL-Plants: tr|A0A0L9URH1|A0A0L9URH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82583439..82588541) extracted from Lotus japonicus Gifu genome v1.2.
GTTTATAAGTTTCAAACTCCATAAAAGCCCAACATTATGATCCATGTAAACTCGGATCCATATCAATATCGGACAAAACC GACCCATATACAGAATCCGATTCCAGTTGCAGGGTGAAGCAAGCAAACCCTATATACTTGAACGTTCTCACCACACGCCA CTCTCTCTCTCTCTCTCTCATCGCCGTTCTCCGATCGATTCCGCCACCGTGGTTCAACCGCAGCGAACAATTCCCATTTC CGCAAGTTGAAATCAAGGGTTTGAGGCGACATGTCTGATCGATTGACCCGTATTGCCATCGTGAGCAACGACAGGTGCAA GCCGAAGAAGTGTCGTCAGGAGTGTAAGAAGAGTTGCCCCGTGGTCAGAACCGGTAAGATCTGATTGTCACGCTTTCTAG GGTTCAATTCTCAATTCTGGGGTGGAGTTTTTTTGTACCCTATTGCCGATACAAGCTTCGAATTTCCAAGTGGGAGCTTA GAAATGGGTTTTTCTTTCTTGAATTTGTTTGTTCATGGAATTTACGTGGCTGAATTCTGATGGGGTGTGTTTTGAGTGAC GAATTGTGTGTTTGATTACAGGTAGGTTGTGTATTGAGGTGTCTTCTGCATCGAAGATTGCTTACATATCTGAGGAATTG TGCATTGGATGCGGTATTTGTGTTAAGGTATTGGATATGGCGTTATGGTGGTATTGTTATCTTTGATTCTAGTTGATGGG GTTTTATTTTATGTGATGAGGTTTGTTAATTGTTATCCATTGGTGTAGAAATGTCCTTTTGAAGCTATCCAGATTATCAA CTTGCCCAAGGACTTGGACAAAGACACCACTCATAGATATGGTCCTAATACTTTTAAGCTGCATAGGTGAGTTATCATTT AGCTGCATTTTCTTGTAAATTTGATAGTAAACTAGTGATTAGCTTCTGATGAATAGAAATATGATGATGGCAGGTTGCCA GTGCCGAGGCCAGGGCAAGTGCTTGGGTTGGTTGGGACAAATGGAATCGGCAAGTCCACTGCCCTTAAAGTGTTGGCTGG AAAATTGAAACCAAACCTGGGTCGTTTCACTGTAATAACCACAATTTGACTCTTTCGTTACAGCTTCAGTGTTTGGTGTT TTACTGTATTCATTTAATTTTTGTTTTCCTTGCAGAACCCGCCTGATTGGCAGGAAATTTTGACCTACTTTCGAGGATCT GAATTGCAGAATTACTTCACTCGAATTCTAGAGGATGATTTGAAGGTGATGTCTGTGTTATTTGATATGTATGAATGTAG TGATGTCGCAGTATAACTTAGCAAAGTTTATGTGTTCTTTCAACATGTGTGTTTTTCTAATTTGAATTTTATGTTTATTT CTGTTTTTCTTACTGGACCAATTATTGTTTATGTGATTTTAAGAATCTATGAACCTTAGACTGTTAGAATTGCCTCAATC GAGAAGGGATACACTAATATTGTCAATAGAGTCAGTAAATTTATTATTCTGTTGTGCCCTTCAGATGACTAACTTAACAT AGGTCATAGGTGAGATATGTTGTGATTTGTGAGTCTTTTTGGTAAATACATGTAGAAGAAGCTAGTAGTTAGCAGTTACA GTACAGATGACGTTCAAATTGATGACCGAAGTCCAAGTTCAGCTTCAGCTTCATAATTCAGTCTGTTGCATCATTGATAT GTAGAGGCCCTTTCAGTATTGATACATTCAAATACCATATCTTCATGACTAGCTATCTTAACATATCACCGTATGTATAT CTGAAATTTACTACATATATATATGCTAGTTTATATCTAACCATATCTCTAAAGTCTAAACTATGATTACCATGGAAATA CCAAATTCTAAATCCTTGTAATATATAAATATAAATCTTAAGCATTGTAATCATTAGATGGTTATATGTTTTATATTTTA GCACAAATCCAGCACTACAACTAAATCTAGCATTGTAACATCACTTTTCCTTTACTTTTGGAAGTTCAGTCTTATCGTTG CTTGATATGCTAGCTTTTGCTTTGCTTACATTTTACTGAATATTCTCTCATTAGCGCTAATCTGCTGTTTGAATTTTGTA ATAATAAGATAATATACCATTTAAAAAAAGTTTTTCTTCCTGTTTGTAATTGTGCTTATTTTAATATTACATAGGCTATC ATCAAGCCTCAGTATGTTGACCATATTCCAAAAGCTGTGCAAGGGAATGTGGGGGAGGTGCTAGAGCAGAAAGATGAGAG AGATGTAAAGGCAGAGCTTTGTACTGATCTGGAGCTTAACCAGGTTATAGATCGTAATGTTGGTGATCTTTCAGGTGGTG AGCTCCAAAGGTTTGCAATTGCAGTTGTTGCCATCCAGAATGCTGAGATATACATGTTTGATGAACCTTCTAGTTATCTT GATGTGAAACAAAGGCTGAAAGCTGCCCAAGTCATTCGATCATTGCTCAGGCCTAACAGGTTAGTTCCCTTTTCTCTCAG TAGTCTCTTCTTTCAATCTTGTCTACATCTCCATTTGATTTTGTTTCCAATTCTCTTGTTTCAGCTATGTAATTGTTGTA GAGCACGATCTTAGTGTCTTGGACTACTTATCGGACTTTATTTGCTGCTTGTATGGCAAACCTGGTGCATATGGAGTGGT AACCCTTCCTTTCTCAGTCAGAGAAGGAATTAACATCTTCTTGGCTGGGTTTGTTCCAACAGAAAATCTTAGGTTCCGGG ATGAATCTCTTACGTTCAAGGTATCTCAACCACCCATTTGCTGAATCTAAAGCCTAAACTCAATATTGCTGTTAAGAATG AAATGGTTCAGCACTGAAATTGATGTGGTGGTGCATGTTTAAACATGCCAAAGATAAAATTGACTCATTCCGAATATATG TAGAACCAATTGCATTATTCAAATCATTACATGACATTTATTTCCTTCAGTGCTGCATCATATATTTGATTAAATGTCCA CATTTTCTTCGCCTTACAAATGAAAATATTTTAGGGCTTGTTTGATTCTCTTTTTAGTTTTTGTATTTAGAAACTGTTTT CAGAAACAATTTTTAAATCTGTTCTTTAGAAAAAGAGAAAGAAGAAACGGTTTGAGCGATATGCTTTTCAAAATTGGAAA AGCTGTGATTTGAAAACTAAAAAAAAAACTGAAAATATCTGAGATGTTTTGTTTTTTCAGTTTTAATAACTGGAAATAAC AACTTTTTTTTAAGGCCTGTTTTCAAATACTGTCCATACCAAATGAGTTTTTTTTTTCTTTCTGTTTTTGTATTTAGAAA CTGTTTTCAGAAACAATTTTAATCTGTTCTTTAGAAAAAGAGAAAGAAGAAACGGTTTGAGCGATATGCTTTTCAAAATT GGAAAAGCTGTGATTTGAAAACTAAAAACAAAAACTGAAAATATCTGAGATGTTTTGTTTTTTCAGTTTTAATAACTGGA AATAACAACTGTTTTTTAAGGTCTGTTTTCAAATACTGTCCATACCAAATGAGTTTTTTTCTTTTACTGTTTTTAAAACC TGAAAGCTGTTCCATAAAACAGTAACCAGACAGGCCCTTAATCCTTTTTTTATCATTGCTTTATTATTTATTACTGTAAA TTTCTGTACTTAATTTTGAATTCCAAAAGTTCTCAGCTTTATCGCACACACCTCATTCTTTTGTTGTGTCTAGGTTGCTG AGACTCCACAGGAAACTGCCGAGGAAGCTCAAACATATGCTCGATACAAGTATCCAGCCATGAGCAAAACTCAAGGCAAT TTCAGGCTTCGTGTTGCTGAGGGAGAATTTACTGATTCTCAAATTATTGTGATGCTGGGTGAGAATGGGACCGGAAAGAC AACATTTATTCGTATGCTGGTATTCTTTTAGTCATATTTGTCTTTATGGAACTGTCTAATTCTTCGCATATTTATTCACC TAACTCTTTTGTATTACTCAGGCTGGTTTATTGAAGCCTGACTCTGTAGAAGGTGGTTCTGATGTGGATATGCCTGAGTT TAACGTTTCATACAAGCCTCAGAAGATTAGCCCTAAGTTCCAATCAACTGTTAGACACTTACTGCACCAAAAAATTCGTG ATGCATATACCCATCCCCAGTTTGTATCAGATGTTATGAAGCCACTTCTTATCGAACAATTAATGGACCAAGAAGTTGTG AATCTTTCTGGTGGAGAGTTGCAAAGAGTTGCATTATGTCTTTGTCTCGGAAAGGTATTATATGTTTCATTCTTGAAAAC AAGTCGAGATTATTGTGCACCTTAAATTCTAGCATCTGCCCCATTTTTTTCTTCCCCCCTGCATTCTTTGATACTTTCTA GTTTCCTATAGGAGGATGGTCTTTCCATATAATCAAAATGATTTTATTGCTAGTACCTTCGTTTTCTGGAACTTTTAGGA TCTGTTGTGAGCTTTCTGTCTACTAAATTTTGTTTCAGACTATATAGCAATTAACATTTCCTGATTCGTTACTGTTCTAC TATAGCAACCTGTAGACTGTAGTAGTCTCTACCTTTGCCAAATGACATGGCAAGAATTTTGGAACTATTGTCTCATAATT TACATGCATGCCTCCATTCCCCCTCCCCTCTCCTAAACTAAATAGCATTTCATGTTTTCTGATCCATTGTTTCCTACCAC ACAGCCTGCTGACATCTATCTGATAGATGAGCCAAGTGCATATCTTGATTCTGAACAGCGAATTCACGCTGCCAAAGTCA TTAAGAGGTTTATTCTTCATGCAAAGAAAACGGCTTTTGTGGTCGAGCATGATTTCATCATGGCAACATACCTTGCTGAC AGAGTTATTGTTTACGAGGGTAGACCTTCAATCGATTGTACTGCAAATTGTCCACAATCATTGTTGTCTGGGATGAACCT TTTCTTATCAGTAAGTGTCATATCATATTTGTGAAAGTTTAGAAGTATTTTTGTGGTCTGTGCTGGTACTTATGTGATAT ATCTAATGCAATTGCTGTTGCAGCATCTTGACATCACATTTAGGAGAGACCCAACCAACTTTCGTCCAAGGATCAACAAA ATTGATTCAACCAAGGACAGAGAACAAAAGTCTGCTGGGTCTTATTATTATCTTGATGACTGA
CDS sequence (LotjaGi2g1v0349000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGATCGATTGACCCGTATTGCCATCGTGAGCAACGACAGGTGCAAGCCGAAGAAGTGTCGTCAGGAGTGTAAGAA GAGTTGCCCCGTGGTCAGAACCGGTAGGTTGTGTATTGAGGTGTCTTCTGCATCGAAGATTGCTTACATATCTGAGGAAT TGTGCATTGGATGCGGTATTTGTGTTAAGAAATGTCCTTTTGAAGCTATCCAGATTATCAACTTGCCCAAGGACTTGGAC AAAGACACCACTCATAGATATGGTCCTAATACTTTTAAGCTGCATAGGTTGCCAGTGCCGAGGCCAGGGCAAGTGCTTGG GTTGGTTGGGACAAATGGAATCGGCAAGTCCACTGCCCTTAAAGTGTTGGCTGGAAAATTGAAACCAAACCTGGGTCGTT TCACTAACCCGCCTGATTGGCAGGAAATTTTGACCTACTTTCGAGGATCTGAATTGCAGAATTACTTCACTCGAATTCTA GAGGATGATTTGAAGGCTATCATCAAGCCTCAGTATGTTGACCATATTCCAAAAGCTGTGCAAGGGAATGTGGGGGAGGT GCTAGAGCAGAAAGATGAGAGAGATGTAAAGGCAGAGCTTTGTACTGATCTGGAGCTTAACCAGGTTATAGATCGTAATG TTGGTGATCTTTCAGGTGGTGAGCTCCAAAGGTTTGCAATTGCAGTTGTTGCCATCCAGAATGCTGAGATATACATGTTT GATGAACCTTCTAGTTATCTTGATGTGAAACAAAGGCTGAAAGCTGCCCAAGTCATTCGATCATTGCTCAGGCCTAACAG CTATGTAATTGTTGTAGAGCACGATCTTAGTGTCTTGGACTACTTATCGGACTTTATTTGCTGCTTGTATGGCAAACCTG GTGCATATGGAGTGGTAACCCTTCCTTTCTCAGTCAGAGAAGGAATTAACATCTTCTTGGCTGGGTTTGTTCCAACAGAA AATCTTAGGTTCCGGGATGAATCTCTTACGTTCAAGGTTGCTGAGACTCCACAGGAAACTGCCGAGGAAGCTCAAACATA TGCTCGATACAAGTATCCAGCCATGAGCAAAACTCAAGGCAATTTCAGGCTTCGTGTTGCTGAGGGAGAATTTACTGATT CTCAAATTATTGTGATGCTGGGTGAGAATGGGACCGGAAAGACAACATTTATTCGTATGCTGGCTGGTTTATTGAAGCCT GACTCTGTAGAAGGTGGTTCTGATGTGGATATGCCTGAGTTTAACGTTTCATACAAGCCTCAGAAGATTAGCCCTAAGTT CCAATCAACTGTTAGACACTTACTGCACCAAAAAATTCGTGATGCATATACCCATCCCCAGTTTGTATCAGATGTTATGA AGCCACTTCTTATCGAACAATTAATGGACCAAGAAGTTGTGAATCTTTCTGGTGGAGAGTTGCAAAGAGTTGCATTATGT CTTTGTCTCGGAAAGCCTGCTGACATCTATCTGATAGATGAGCCAAGTGCATATCTTGATTCTGAACAGCGAATTCACGC TGCCAAAGTCATTAAGAGGTTTATTCTTCATGCAAAGAAAACGGCTTTTGTGGTCGAGCATGATTTCATCATGGCAACAT ACCTTGCTGACAGAGTTATTGTTTACGAGGGTAGACCTTCAATCGATTGTACTGCAAATTGTCCACAATCATTGTTGTCT GGGATGAACCTTTTCTTATCACATCTTGACATCACATTTAGGAGAGACCCAACCAACTTTCGTCCAAGGATCAACAAAAT TGATTCAACCAAGGACAGAGAACAAAAGTCTGCTGGGTCTTATTATTATCTTGATGACTGA
Protein sequence (LotjaGi2g1v0349000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDRLTRIAIVSNDRCKPKKCRQECKKSCPVVRTGRLCIEVSSASKIAYISEELCIGCGICVKKCPFEAIQIINLPKDLD KDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFTNPPDWQEILTYFRGSELQNYFTRIL EDDLKAIIKPQYVDHIPKAVQGNVGEVLEQKDERDVKAELCTDLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF DEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTE NLRFRDESLTFKVAETPQETAEEAQTYARYKYPAMSKTQGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKP DSVEGGSDVDMPEFNVSYKPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALC LCLGKPADIYLIDEPSAYLDSEQRIHAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGRPSIDCTANCPQSLLS GMNLFLSHLDITFRRDPTNFRPRINKIDSTKDREQKSAGSYYYLDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 332 | 332 | 1.8E-85 | – | |
PANTHER | 1 | 606 | 606 | 0.0 | – | |
PANTHER | 1 | 606 | 606 | 0.0 | ||
SUPERFAMILY | 6 | 145 | 140 | 1.26E-15 | – | |
Pfam | 6 | 37 | 32 | 3.5E-14 | ||
PRINTS | 24 | 39 | 16 | 5.2E-73 | ||
ProSiteProfiles | 46 | 75 | 30 | 10.927 | ||
Pfam | 49 | 71 | 23 | 8.8E-9 | ||
PRINTS | 52 | 76 | 25 | 5.2E-73 | ||
ProSitePatterns | 55 | 66 | 12 | - | ||
ProSiteProfiles | 70 | 315 | 246 | 14.573 | ||
CDD | 78 | 332 | 255 | 1.62021E-170 | ||
PRINTS | 79 | 99 | 21 | 5.2E-73 | ||
SUPERFAMILY | 101 | 291 | 191 | 8.35E-33 | ||
Pfam | 102 | 244 | 143 | 4.9E-17 | ||
SMART | 102 | 294 | 193 | 1.3E-7 | ||
PRINTS | 107 | 132 | 26 | 5.2E-73 | ||
PRINTS | 140 | 156 | 17 | 5.2E-73 | ||
PRINTS | 156 | 182 | 27 | 5.2E-73 | ||
ProSitePatterns | 217 | 231 | 15 | - | ||
Gene3D | 334 | 604 | 271 | 7.4E-43 | – | |
ProSiteProfiles | 344 | 569 | 226 | 14.553 | ||
CDD | 350 | 599 | 250 | 3.44107E-157 | – | |
Pfam | 370 | 497 | 128 | 1.7E-16 | ||
SUPERFAMILY | 370 | 542 | 173 | 8.6E-33 | ||
SMART | 373 | 547 | 175 | 5.9E-11 | ||
ProSitePatterns | 469 | 483 | 15 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi2g1v0349000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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