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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001611
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 861 results. Now displaying 3 of 18 with 50 rows per page. This search has taken 6.493s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0310539.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356510976|ref|XP_003524208.1| chr0 162205293 162208324 -
3 domain predictions
1 GO term
Lj0g3v0311769.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356503054|ref|XP_003520327.1| chr0 162769296 162770907 +
2 domain predictions
1 GO term
Lj0g3v0313469.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase RCH1-like [Glycine max] gi|356566445|ref|XP_003551442.1| chr0 163689060 163694316 -
3 domain predictions
1 GO term
Lj0g3v0318669.1
n.a. PREDICTED: disease resistance protein RGA2 [Vitis vinifera] gi|225456041|ref|XP_002277479.1| chr0 166437791 166440873 +
2 domain predictions
1 GO term
Lj0g3v0327439.1
n.a. disease resistance protein/LRR protein-related protein precursor [Glycine max] gi|351724553|ref|NP_001235526.1| chr0 171171664 171174112 -
3 domain predictions
1 GO term
Lj0g3v0328559.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cicer arietinum] gi|502122925|ref|XP_004497940.1| chr0 171728076 171731884 -
2 domain predictions
1 GO term
Lj0g3v0328979.1
n.a. n.a. chr0 171974264 171979359 +
2 domain predictions
1 GO term
Lj0g3v0329609.1
n.a. disease resistance protein [Glycine max] gi|351734460|ref|NP_001235512.1| chr0 172319366 172321769 +
4 domain predictions
1 GO term
Lj0g3v0330469.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase RCH1-like [Glycine max] gi|356527419|ref|XP_003532308.1| chr0 172708068 172710394 -
2 domain predictions
1 GO term
Lj0g3v0330479.1
n.a. n.a. chr0 172708068 172709935 +
3 domain predictions
1 GO term
Lj0g3v0330549.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357490917|ref|XP_003615746.1| chr0 172745051 172749240 -
2 domain predictions
1 GO term
Lj0g3v0330549.2
n.a. NBS resistance protein [Medicago truncatula] gi|357472003|ref|XP_003606286.1| chr0 172746156 172749240 -
2 domain predictions
1 GO term
Lj0g3v0331049.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 173005144 173009117 -
4 domain predictions
1 GO term
Lj0g3v0332709.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356569387|ref|XP_003552883.1| chr0 174114063 174116111 -
2 domain predictions
1 GO term
Lj0g3v0333829.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502096406|ref|XP_004490727.1| chr0 174724986 174726946 +
2 domain predictions
1 GO term
Lj0g3v0336229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Glycine max] gi|356506579|ref|XP_003522057.1| chr0 176102747 176107250 -
5 domain predictions
1 GO term
Lj0g3v0339459.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr0 177867141 177868508 +
3 domain predictions
1 GO term
Lj0g3v0339469.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr0 177869471 177870154 +
2 domain predictions
1 GO term
Lj0g3v0343819.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Glycine max] gi|356536856|ref|XP_003536949.1| chr0 180296303 180299178 +
2 domain predictions
1 GO term
Lj0g3v0346099.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Fragaria vesca subsp]. vesca] gi|470101852|ref|XP_004287382.1| chr0 181531041 181534267 +
2 domain predictions
1 GO term
Lj0g3v0347229.1
n.a. PREDICTED: LRR repeats and ubiquitin-like domain-containing protein At2g30105-like [Cicer arietinum] gi|502129431|ref|XP_004500301.1| chr0 182175842 182182617 +
3 domain predictions
1 GO term
Lj0g3v0356809.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Glycine max] gi|356495063|ref|XP_003516400.1| chr0 187910217 187913635 -
2 domain predictions
1 GO term
Lj0g3v0359279.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561446|ref|XP_003548992.1| chr0 189146158 189148127 -
3 domain predictions
1 GO term
Lj0g3v0359679.1
n.a. PREDICTED: serine/threonine-protein kinase BRI1-like 1-like [Cicer arietinum] gi|502127369|ref|XP_004499678.1| chr0 189379633 189384247 +
3 domain predictions
1 GO term
Lj0g3v0361919.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum] gi|502080122|ref|XP_004486464.1| chr0 190714722 190719641 +
2 domain predictions
1 GO term
Lj0g3v0361919.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum] gi|502080122|ref|XP_004486464.1| chr0 190714835 190719641 +
3 domain predictions
1 GO term
Lj1g3v0013170.1
n.a. PREDICTED: EIN3-binding F-box protein 1-like isoform 2 [Glycine max] gi|356552521|ref|XP_003544615.1| chr1 80320 80738 -
2 domain predictions
1 GO term
Lj1g3v0050980.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 2-like [Cicer arietinum] gi|502158862|ref|XP_004511305.1| chr1 290354 292244 +
2 domain predictions
1 GO term
Lj1g3v0112960.1
n.a. Leucine-rich repeat protein kinase family protein isoform 1 [Theobroma cacao] gi|508713910|gb|EOY05807.1| chr1 1212000 1218600 +
3 domain predictions
1 GO term
Lj1g3v0526480.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360-like [Glycine max] gi|356519088|ref|XP_003528206.1| chr1 6611600 6615007 +
2 domain predictions
1 GO term
Lj1g3v0694020.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X2 [Cicer arietinum] gi|502177298|ref|XP_004516050.1| chr1 8962713 8977545 -
2 domain predictions
1 GO term
Lj1g3v0934380.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356507598|ref|XP_003522551.1| chr1 11730957 11733726 +
3 domain predictions
1 GO term
Lj1g3v1060470.1
n.a. Kinase-like protein [Medicago truncatula] gi|357464125|ref|XP_003602344.1| chr1 13106600 13110033 +
4 domain predictions
1 GO term
Lj1g3v1113880.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502136730|ref|XP_004502808.1| chr1 13953318 13969716 +
3 domain predictions
1 GO term
Lj1g3v1147540.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220498 +
4 domain predictions
1 GO term
Lj1g3v1147550.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220810 +
4 domain predictions
1 GO term
Lj1g3v1207870.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like isoform X1 [Cicer arietinum] gi|502136840|ref|XP_004502857.1| chr1 14753957 14759281 -
3 domain predictions
1 GO term
Lj1g3v1222370.1
n.a. PREDICTED: brassinosteroid LRR receptor kinase-like [Cicer arietinum] gi|502136882|ref|XP_004502878.1| chr1 14923173 14927479 -
4 domain predictions
1 GO term
Lj1g3v1222380.1
n.a. Brassinosteroid receptor [Medicago truncatula] gi|357464445|ref|XP_003602504.1| chr1 14923489 14927479 -
2 domain predictions
1 GO term
Lj1g3v1361010.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
2 domain predictions
1 GO term
Lj1g3v1361010.2
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
2 domain predictions
1 GO term
Lj1g3v1361010.3
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
2 domain predictions
1 GO term
Lj1g3v1361010.4
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286719 16294297 -
2 domain predictions
1 GO term
Lj1g3v1548830.1
n.a. Geranylgeranyl transferase type-2 subunit alpha [Medicago truncatula] gi|357465223|ref|XP_003602893.1| chr1 18562135 18566823 -
2 domain predictions
1 GO term
Lj1g3v1686670.1
n.a. Disease resistance protein [Medicago truncatula] gi|357465601|ref|XP_003603085.1| chr1 19998154 20002147 -
2 domain predictions
1 GO term
Lj1g3v1911780.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484477|ref|XP_003612526.1| chr1 22706045 22709873 +
4 domain predictions
1 GO term
Lj1g3v1991630.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357519095|ref|XP_003629836.1| chr1 23470386 23474214 -
2 domain predictions
1 GO term
Lj1g3v2072070.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790-like [Glycine max] gi|356518354|ref|XP_003527844.1| chr1 24594650 24599026 -
5 domain predictions
1 GO term
Lj1g3v2095470.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum] gi|502131757|ref|XP_004501091.1| chr1 24754477 24763730 +
2 domain predictions
1 GO term
Lj1g3v2096160.1
n.a. PREDICTED: receptor-like protein kinase HAIKU2-like [Glycine max] gi|356507963|ref|XP_003522732.1| chr1 25102415 25119448 -
3 domain predictions
1 GO term