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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013698
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We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.971s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0265639.1
n.a. PREDICTED: squalene monooxygenase-like [Cicer arietinum] gi|502142293|ref|XP_004504886.1| chr0 137638681 137639694 -
2 domain predictions
4 GO terms
Lj0g3v0267429.3
n.a. PREDICTED: squalene monooxygenase-like [Glycine max] gi|356569981|ref|XP_003553171.1| chr0 138558838 138563099 +
2 domain predictions
4 GO terms
Lj0g3v0292939.1
n.a. PREDICTED: squalene monooxygenase-like [Glycine max] gi|356521261|ref|XP_003529275.1| chr0 152033266 152035629 -
2 domain predictions
4 GO terms
Lj0g3v0298799.2
n.a. PREDICTED: squalene monooxygenase-like [Glycine max] gi|356521261|ref|XP_003529275.1| chr0 155266521 155271352 +
2 domain predictions
4 GO terms
Lj1g3v1779010.1
n.a. PREDICTED: squalene monooxygenase-like isoform X1 [Cicer arietinum] gi|502132708|ref|XP_004501491.1| chr1 20585326 20590913 +
2 domain predictions
4 GO terms
Lj1g3v1779010.2
n.a. PREDICTED: squalene monooxygenase-like isoform X5 [Cicer arietinum] gi|502132716|ref|XP_004501495.1| chr1 20586990 20590913 +
2 domain predictions
4 GO terms
Lj4g3v0412640.1
n.a. PREDICTED: squalene monooxygenase-like [Glycine max] gi|356521261|ref|XP_003529275.1| chr4 5354437 5372665 +
2 domain predictions
4 GO terms
Lj4g3v0412640.2
n.a. PREDICTED: squalene monooxygenase-like [Cicer arietinum] gi|502142293|ref|XP_004504886.1| chr4 5356051 5373538 +
2 domain predictions
4 GO terms
Lj4g3v0412640.3
n.a. PREDICTED: squalene monooxygenase-like [Cicer arietinum] gi|502142293|ref|XP_004504886.1| chr4 5357765 5373730 +
2 domain predictions
4 GO terms
Lj5g3v0347610.1
n.a. PREDICTED: squalene monooxygenase-like [Glycine max] gi|356577688|ref|XP_003556956.1| chr5 3370517 3374596 +
2 domain predictions
4 GO terms
Lj6g3v1966320.1
n.a. Squalene monooxygenase [Theobroma cacao] gi|508705377|gb|EOX97273.1| chr6 22493455 22495888 -
2 domain predictions
4 GO terms
Lj6g3v2171780.1
n.a. PREDICTED: squalene monooxygenase-like [Glycine max] gi|356521261|ref|XP_003529275.1| chr6 25037897 25061137 -
2 domain predictions
4 GO terms
LotjaGi1g1v0363700.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1K897|I1K897_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0363700 LjG1.1_chr1 83931051 83937993 +
2 domain predictions
4 GO terms
LotjaGi1g1v0363700.2
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A151TTQ0|A0A151TTQ0_CAJCA Squalene monooxygenase; Found in the gene: LotjaGi1g1v0363700 LjG1.1_chr1 83932885 83936266 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043300.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5117536 5142936 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043300.2
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119215 5123029 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043300.3
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119254 5123029 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043300.4
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119257 5122945 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043300.5
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119257 5122978 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043300.6
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A0B2SMP9|A0A0B2SMP9_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119941 5122945 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043300.7
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A0B2SMP9|A0A0B2SMP9_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119999 5122945 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043300.8
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A075DZG2|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5135530 5142722 +
2 domain predictions
4 GO terms
LotjaGi4g1v0043600.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043600 LjG1.1_chr4 5164794 5169582 +
2 domain predictions
4 GO terms
LotjaGi5g1v0037500.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A0B2RV99|A0A0B2RV99_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi5g1v0037500 LjG1.1_chr5 6204062 6209194 +
2 domain predictions
4 GO terms
LotjaGi5g1v0037500.2
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A0B2QBL8|A0A0B2QBL8_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi5g1v0037500 LjG1.1_chr5 6205244 6207980 +
2 domain predictions
4 GO terms
LotjaGi6g1v0181200.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|K7MRG5|K7MRG5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181200 LjG1.1_chr6 47323437 47328010 -
2 domain predictions
4 GO terms
LotjaGi6g1v0345600.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A075DZG2|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi6g1v0345600 LjG1.1_chr6 65825073 65831462 -
2 domain predictions
4 GO terms
LotjaGi6g1v0345600.2
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A075DZG2|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi6g1v0345600 LjG1.1_chr6 65825478 65831462 -
2 domain predictions
4 GO terms
LotjaGi6g1v0345600.3
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1M2I5|I1M2I5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0345600 LjG1.1_chr6 65825505 65828667 -
2 domain predictions
4 GO terms
LotjaGi6g1v0345600.4
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1M2I5|I1M2I5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0345600 LjG1.1_chr6 65825505 65828978 -
2 domain predictions
4 GO terms
LotjaGi6g1v0345900.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A075DZG2|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi6g1v0345900 LjG1.1_chr6 65840478 65845023 -
2 domain predictions
4 GO terms