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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Transcription factor TFIIA complex | A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12). | ||
| Biological process | Transcription initiation from RNA polymerase II promoter | Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Transcription initiation factor IIA subunit [Medicago truncatula] gi|357501375|ref|XP_003620976.1| | 16 | ||
| – | PREDICTED: transcription initiation factor IIA large subunit-like [Cicer arietinum] gi|502081823|ref|XP_004486980.1| | 14 | ||
| – | PREDICTED: transcription initiation factor IIA large subunit-like [Cicer arietinum] gi|502081823|ref|XP_004486980.1| | 14 | ||
| – | Transcription initiation factor IIA subunit 2; TAIR: AT4G24440.1 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); Swiss-Prot: sp|Q39236|T2AG_ARATH Transcription initiation factor IIA subunit 2; TrEMBL-Plants: tr|I3S8P2|I3S8P2_LOTJA Transcription initiation factor IIA subunit 2; Found in the gene: LotjaGi1g1v0135200 | 16 | ||
| – | Transcription initiation factor IIA subunit 2; TAIR: AT4G24440.1 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); Swiss-Prot: sp|Q39236|T2AG_ARATH Transcription initiation factor IIA subunit 2; TrEMBL-Plants: tr|I3S8P2|I3S8P2_LOTJA Transcription initiation factor IIA subunit 2; Found in the gene: LotjaGi1g1v0135200 | 16 | ||
| – | Transcription initiation factor IIA large subunit; TAIR: AT1G07470.1 Transcription factor IIA, alpha/beta subunit; Swiss-Prot: sp|Q9USU9|TOA1_SCHPO Transcription initiation factor IIA large subunit; TrEMBL-Plants: tr|A0A0B2RCP3|A0A0B2RCP3_GLYSO Transcription initiation factor IIA large subunit; Found in the gene: LotjaGi3g1v0286400 | 12 | ||
| – | Transcription initiation factor IIA large subunit; TAIR: AT1G07470.1 Transcription factor IIA, alpha/beta subunit; Swiss-Prot: sp|Q9USU9|TOA1_SCHPO Transcription initiation factor IIA large subunit; TrEMBL-Plants: tr|A0A0B2RCP3|A0A0B2RCP3_GLYSO Transcription initiation factor IIA large subunit; Found in the gene: LotjaGi3g1v0286400 | 12 | ||
| – | Transcription initiation factor IIA large subunit; TAIR: AT1G07480.1 Transcription factor IIA, alpha/beta subunit; Swiss-Prot: sp|Q9USU9|TOA1_SCHPO Transcription initiation factor IIA large subunit; TrEMBL-Plants: tr|V7BZ67|V7BZ67_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0490400 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 12.50 |