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IPR025558

Source: InterPro

Description

IPR025558 is a Domain of unknown function DUF4283.

<p>This domain is found in plant proteins including the uncharacterized protein At4g02000. Considering the very diverse range of other domains it is associated with, it is possible that this domain is a binding/guiding region. It contains two highly conserved tryptophan residues.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 194

Transcript Name Description Predicted domains Domain count
Lj0g3v0020159.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj0g3v0024349.1
– Uncharacterized protein TCM_040863 [Theobroma cacao] gi|508785584|gb|EOY32840.1|
Domains
2
Lj0g3v0041099.1
– Uncharacterized protein TCM_040863 [Theobroma cacao] gi|508785584|gb|EOY32840.1|
Domains
2
Lj0g3v0045599.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
8
Lj0g3v0063149.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj0g3v0064879.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
Lj0g3v0080339.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
3
Lj0g3v0083669.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
9
Lj0g3v0085179.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
4
Lj0g3v0090169.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
3
Lj0g3v0100859.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj0g3v0105539.1
– Uncharacterized protein TCM_014510 [Theobroma cacao] gi|508775036|gb|EOY22292.1|
Domains
4
Lj0g3v0109539.1
– Non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] gi|9759309|dbj|BAB09815.1|
Domains
5
Lj0g3v0109999.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
6
Lj0g3v0115129.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
5
Lj0g3v0122479.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
2
Lj0g3v0123459.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
3
Lj0g3v0130469.1
–
Domains
10
Lj0g3v0137589.1
– Non-ltr retroelement reverse transcriptase [Rosa rugosa] gi|399920227|gb|AFP55574.1|
Domains
3
Lj0g3v0163539.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
6
Lj0g3v0164659.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
5
Lj0g3v0167529.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
6
Lj0g3v0168239.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
2
Lj0g3v0170629.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
3
Lj0g3v0172149.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj0g3v0176059.1
– Zinc ion binding,nucleic acid binding-like protein [Theobroma cacao] gi|508777995|gb|EOY25251.1|
Domains
2
Lj0g3v0177219.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
11
Lj0g3v0183619.1
– Zinc ion binding / nucleic acid binding protein [Arabidopsis thaliana] gi|15226168|ref|NP_178215.1|
Domains
4
Lj0g3v0185329.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
4
Lj0g3v0195539.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
2
Lj0g3v0202139.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
9
Lj0g3v0208349.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj0g3v0211989.1
– Zinc ion binding,nucleic acid binding-like protein [Theobroma cacao] gi|508777995|gb|EOY25251.1|
Domains
4
Lj0g3v0213239.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
5
Lj0g3v0218639.1
– Uncharacterized protein TCM_040863 [Theobroma cacao] gi|508785584|gb|EOY32840.1|
Domains
3
Lj0g3v0223079.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj0g3v0224539.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
Lj0g3v0228539.1
– Non-ltr retroelement reverse transcriptase [Rosa rugosa] gi|399920227|gb|AFP55574.1|
Domains
4
Lj0g3v0235119.1
– Gag non-LTR retrotransposase [Arabidopsis cebennensis] gi|158828302|gb|ABW81177.1|
Domains
5
Lj0g3v0236459.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
5
Lj0g3v0238309.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
2
Lj0g3v0243949.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj0g3v0244479.1
– Gag non-LTR retrotransposase [Arabidopsis cebennensis] gi|158828302|gb|ABW81177.1|
Domains
4
Lj0g3v0247229.1
–
Domains
7
Lj0g3v0247539.1
– LRR receptor-like serine/threonine-protein kinase FLS2 [Aegilops tauschii] gi|475543050|gb|EMT10072.1|
Domains
7
Lj0g3v0254879.1
–
Domains
2
Lj0g3v0264019.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
5
Lj0g3v0264349.1
– DNA alkylation repair protein [Amycolatopsis mediterranei U32] gi|300787900|ref|YP_003768191.1|
Domains
2
Lj0g3v0268029.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj0g3v0268689.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
9
Lj0g3v0272419.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
5
Lj0g3v0280599.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
6
Lj0g3v0281119.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
2
Lj0g3v0282289.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
9
Lj0g3v0282989.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
8
Lj0g3v0283329.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
5
Lj0g3v0285619.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj0g3v0289199.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj0g3v0290209.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
4
Lj0g3v0292909.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
5
Lj0g3v0298379.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
2
Lj0g3v0307349.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
2
Lj0g3v0320579.1
– Gag non-LTR retrotransposase [Arabidopsis cebennensis] gi|158828302|gb|ABW81177.1|
Domains
5
Lj0g3v0325439.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj0g3v0325539.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
8
Lj0g3v0325679.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
5
Lj0g3v0327329.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
9
Lj0g3v0328819.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj0g3v0330499.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
8
Lj0g3v0337049.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
3
Lj0g3v0337209.1
– BZIP-like protein [Oryza sativa Japonica Group] gi|33465891|gb|AAQ19327.1|
Domains
3
Lj0g3v0337399.1
– Zinc ion binding / nucleic acid binding protein [Arabidopsis thaliana] gi|15226168|ref|NP_178215.1|
Domains
8
Lj0g3v0339569.1
– Zinc ion binding,nucleic acid binding-like protein [Theobroma cacao] gi|508777995|gb|EOY25251.1|
Domains
4
Lj0g3v0340369.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj0g3v0340399.1
– Non-ltr retroelement reverse transcriptase [Rosa rugosa] gi|399920227|gb|AFP55574.1|
Domains
8
Lj0g3v0349299.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
7
Lj0g3v0351699.1
– Uncharacterized protein TCM_040863 [Theobroma cacao] gi|508785584|gb|EOY32840.1|
Domains
2
Lj0g3v0356429.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
Lj0g3v0362379.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
10
Lj1g3v0396960.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj1g3v0463500.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj1g3v1364460.1
– Uncharacterized protein TCM_009467 [Theobroma cacao] gi|508708159|gb|EOY00056.1|
Domains
4
Lj1g3v1648920.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
12
Lj1g3v2611550.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
7
Lj1g3v2953550.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
7
Lj1g3v3024060.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
5
Lj1g3v3390130.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj1g3v3608360.1
– GK22476 [Drosophila willistoni] gi|195449609|ref|XP_002072146.1|
Domains
2
Lj1g3v3963440.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
19
Lj1g3v4204450.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
Lj2g3v0077680.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
9
Lj2g3v0632470.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
3
Lj2g3v0911720.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
12
Lj2g3v1389440.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
4
Lj2g3v1925650.1
– Uncharacterized protein TCM_014510 [Theobroma cacao] gi|508775036|gb|EOY22292.1|
Domains
7
Lj2g3v2029940.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
2
Lj2g3v2183460.1
– OSJNBa0061G20.16 [Oryza sativa Japonica Group] gi|38346596|emb|CAE04660.2|
Domains
2
Lj2g3v2540760.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
4
Lj2g3v2878390.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
6
Lj2g3v3034010.1
– Zinc ion binding,nucleic acid binding-like protein [Theobroma cacao] gi|508777995|gb|EOY25251.1|
Domains
4
Lj2g3v3133590.2
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
5
Lj3g3v0755250.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
7
Lj3g3v1048970.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
9
Lj3g3v1101680.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
2
Lj3g3v1788930.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
8
Lj3g3v3081240.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
4
Lj3g3v3261430.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
10
Lj3g3v3765500.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj4g3v0166280.1
– Uncharacterized protein TCM_014510 [Theobroma cacao] gi|508775036|gb|EOY22292.1|
Domains
6
Lj4g3v0336370.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
8
Lj4g3v0669570.1
– Uncharacterized protein TCM_040863 [Theobroma cacao] gi|508785584|gb|EOY32840.1|
Domains
2
Lj4g3v0683960.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
5
Lj4g3v1073590.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
7
Lj4g3v1291640.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj4g3v1329920.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj4g3v1597120.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
5
Lj4g3v2139470.1
– Non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] gi|9759309|dbj|BAB09815.1|
Domains
4
Lj4g3v2214810.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
4
Lj4g3v2313580.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj4g3v2801600.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
7
Lj4g3v2847410.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
9
Lj5g3v0035330.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
7
Lj5g3v0035380.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
8
Lj5g3v0712320.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
11
Lj5g3v0975880.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj5g3v1602340.1
– Uncharacterized protein TCM_014510 [Theobroma cacao] gi|508775036|gb|EOY22292.1|
Domains
6
Lj5g3v1666250.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
13
Lj5g3v1699330.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
7
Lj5g3v1955070.2
–
Domains
5
Lj5g3v2179910.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
3
Lj6g3v0727730.1
– Zinc ion binding / nucleic acid binding protein [Arabidopsis thaliana] gi|15226168|ref|NP_178215.1|
Domains
7
Lj6g3v1227340.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
11
Lj6g3v2017470.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
LotjaGi1g1v0086100_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|B3EAR8|DCUP_GEOLS Uroporphyrinogen decarboxylase; TrEMBL-Plants: tr|Q1SKZ9|Q1SKZ9_MEDTR Zinc finger, CCHC-type; Found in the gene: LotjaGi1g1v0086100_LC
Domains
6
LotjaGi1g1v0167400_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|A0A151U6T6|A0A151U6T6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0167400_LC
Domains
5
LotjaGi1g1v0206900_LC.2
– RNA-binding family protein; TAIR: AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q29RT0|RBMX_BOVIN RNA-binding motif protein, X chromosome; TrEMBL-Plants: tr|A0A151R197|A0A151R197_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0206900_LC
Domains
13
LotjaGi1g1v0236900_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O74555|BBP_SCHPO Branchpoint-bridging protein; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0236900_LC
Domains
8
LotjaGi1g1v0265400_LC.1
– DUF4283 domain protein; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q2HA26|UTP10_CHAGB U3 small nucleolar RNA-associated protein 10; TrEMBL-Plants: tr|V7AUW5|V7AUW5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0265400_LC
Domains
5
LotjaGi1g1v0306300_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q3E8Z8|PME28_ARATH Putative pectinesterase/pectinesterase inhibitor 28; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0306300_LC
Domains
6
LotjaGi1g1v0309700_LC.1
– DUF4283 domain protein; TAIR: AT5G36225.1 zinc knuckle protein; Swiss-Prot: sp|Q5AK62|SSD1_CANAL Virulence protein SSD1; TrEMBL-Plants: tr|A0A0B2PE36|A0A0B2PE36_GLYSO Transcription factor PIF1; Found in the gene: LotjaGi1g1v0309700_LC
Domains
5
LotjaGi1g1v0353300_LC.1
– RNA-binding protein; TAIR: AT1G58470.1 RNA-binding protein 1; Swiss-Prot: sp|Q5R1W5|SRSF2_PANTR Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151UBV0|A0A151UBV0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0353300_LC
Domains
13
LotjaGi1g1v0411600_LC.1
– DUF4283 domain protein; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|P08793|XDH_CALVI Xanthine dehydrogenase; TrEMBL-Plants: tr|A0A061F6T6|A0A061F6T6_THECC Uncharacterized protein; Found in the gene: LotjaGi1g1v0411600_LC
Domains
3
LotjaGi1g1v0627300_LC.1
– DUF4283 domain protein; TAIR: AT5G36225.1 zinc knuckle protein; Swiss-Prot: sp|Q01063|PDE4D_MOUSE cAMP-specific 3',5'-cyclic phosphodiesterase 4D; TrEMBL-Plants: tr|V7D2J6|V7D2J6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0627300_LC
Domains
3
LotjaGi2g1v0003700_LC.1
– DUF4283 domain protein; TAIR: AT3G53305.1 cytochrome P450, family 71, subfamily B, polypeptide 32; Swiss-Prot: sp|A8A9E3|SYP_IGNH4 Proline--tRNA ligase; TrEMBL-Plants: tr|A0A0R0GKS1|A0A0R0GKS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0003700_LC
Domains
3
LotjaGi2g1v0005600_LC.1
– DUF4283 domain protein; TAIR: AT5G36228.1 nucleic acid binding / zinc ion binding protein; Swiss-Prot: sp|P83548|VNNL3_DROME Vanin-like protein 3; TrEMBL-Plants: tr|A0A151RP88|A0A151RP88_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0005600_LC
Domains
4
LotjaGi2g1v0017500_LC.2
– Gag polyprotein; TAIR: AT5G36228.1 nucleic acid binding / zinc ion binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|A0A061ELV8|A0A061ELV8_THECC Uncharacterized protein; Found in the gene: LotjaGi2g1v0017500_LC
Domains
9
LotjaGi2g1v0068700_LC.1
– RNA binding protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q10422|YDC1_SCHPO Uncharacterized RNA-binding protein C25G10.01; TrEMBL-Plants: tr|V7AKK8|V7AKK8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0068700_LC
Domains
14
LotjaGi2g1v0084600_LC.1
– RNA-binding protein; TAIR: AT5G19030.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic; TrEMBL-Plants: tr|A0A151UBV0|A0A151UBV0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0084600_LC
Domains
12
LotjaGi2g1v0087300_LC.3
– DUF4283 domain protein; TAIR: AT3G47920.1 Ta11-like non-LTR retrotransposon; Swiss-Prot: sp|Q4ZPM1|QUIP_PSEU2 Acyl-homoserine lactone acylase QuiP; TrEMBL-Plants: tr|V7AMN3|V7AMN3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0087300_LC
Domains
5
LotjaGi2g1v0103500_LC.1
– RNA binding protein; TAIR: AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q04836|CP31A_ARATH 31 kDa ribonucleoprotein, chloroplastic; TrEMBL-Plants: tr|A0A151UBV0|A0A151UBV0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0103500_LC
Domains
13
LotjaGi2g1v0108800_LC.1
– DUF4283 domain protein; TAIR: AT2G29340.3 NAD-dependent epimerase/dehydratase family protein; Swiss-Prot: sp|P08262|HEM1_BRADU 5-aminolevulinate synthase; TrEMBL-Plants: tr|V7BJ56|V7BJ56_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0108800_LC
Domains
2
LotjaGi2g1v0148700_LC.1
– DUF4283 domain protein; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P52385|TRM1_HHV7J Tripartite terminase subunit 1; TrEMBL-Plants: tr|A0A061F6T6|A0A061F6T6_THECC Uncharacterized protein; Found in the gene: LotjaGi2g1v0148700_LC
Domains
3
LotjaGi2g1v0148700_LC.2
– DUF4283 domain protein; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P52385|TRM1_HHV7J Tripartite terminase subunit 1; TrEMBL-Plants: tr|A0A061F6T6|A0A061F6T6_THECC Uncharacterized protein; Found in the gene: LotjaGi2g1v0148700_LC
Domains
3
LotjaGi2g1v0148700_LC.3
– DUF4283 domain protein; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P52385|TRM1_HHV7J Tripartite terminase subunit 1; TrEMBL-Plants: tr|A0A061F6T6|A0A061F6T6_THECC Uncharacterized protein; Found in the gene: LotjaGi2g1v0148700_LC
Domains
3
LotjaGi2g1v0148700_LC.4
– DUF4283 domain protein; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P52385|TRM1_HHV7J Tripartite terminase subunit 1; TrEMBL-Plants: tr|A0A061F6T6|A0A061F6T6_THECC Uncharacterized protein; Found in the gene: LotjaGi2g1v0148700_LC
Domains
3
LotjaGi2g1v0148700_LC.5
– DUF4283 domain protein; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P52385|TRM1_HHV7J Tripartite terminase subunit 1; TrEMBL-Plants: tr|A0A061F6T6|A0A061F6T6_THECC Uncharacterized protein; Found in the gene: LotjaGi2g1v0148700_LC
Domains
3
LotjaGi2g1v0319500_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|Q1SKZ9|Q1SKZ9_MEDTR Zinc finger, CCHC-type; Found in the gene: LotjaGi2g1v0319500_LC
Domains
7
LotjaGi2g1v0400300_LC.1
– Gibberellin 3-oxidase 4; TAIR: AT1G80330.1 gibberellin 3-oxidase 4; Swiss-Prot: sp|P32886|POLG_JAEVJ Genome polyprotein; TrEMBL-Plants: tr|A0A0B2RGC3|A0A0B2RGC3_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0400300_LC
Domains
6
LotjaGi3g1v0229200_LC.1
– At-hook motif nuclear-localized protein 22; TAIR: AT2G42940.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9SJG4|AHL16_ARATH AT-hook motif nuclear-localized protein 16; TrEMBL-Plants: tr|A0A061GSL8|A0A061GSL8_THECC Uncharacterized protein; Found in the gene: LotjaGi3g1v0229200_LC
Domains
3
LotjaGi3g1v0293200_LC.1
– DUF4283 domain protein; TAIR: AT1G67700.1 multidrug resistance protein; Swiss-Prot: sp|P44462|CITC_HAEIN [Citrate ][pro]-3S]-lyase] ligase; TrEMBL-Plants: tr|G7IGQ6|G7IGQ6_MEDTR RNA recognition motif; Found in the gene: LotjaGi3g1v0293200_LC
Domains
3
LotjaGi3g1v0349400_LC.2
– DUF4283 domain protein; TAIR: AT3G47920.1 Ta11-like non-LTR retrotransposon; Swiss-Prot: sp|Q8WXS8|ATS14_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 14; TrEMBL-Plants: tr|V7AN97|V7AN97_PHAVU Peroxidase; Found in the gene: LotjaGi3g1v0349400_LC
Domains
5
LotjaGi3g1v0364700_LC.1
– RING/U-box superfamily protein; TAIR: AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|P0CE10|DEAHB_ARATH ATP-dependent RNA helicase DEAH11, chloroplastic; TrEMBL-Plants: tr|K7LTH2|K7LTH2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0364700_LC
Domains
24
LotjaGi3g1v0417000_LC.1
– Retrovirus-related Pol polyprotein LINE-1; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q5PPG7|EIF2D_RAT Eukaryotic translation initiation factor 2D; TrEMBL-Plants: tr|A0A151TS47|A0A151TS47_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi3g1v0417000_LC
Domains
6
LotjaGi3g1v0420200_LC.1
– Glycine-rich RNA-binding-like protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q9FMG4|SC35_ARATH Serine/arginine-rich splicing factor SC35; TrEMBL-Plants: tr|V7BPL0|V7BPL0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0420200_LC
Domains
12
LotjaGi3g1v0434200_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0434200_LC
Domains
8
LotjaGi3g1v0525000_LC.1
– DUF4283 domain protein; TAIR: AT3G44290.1 NAC domain containing protein 60; Swiss-Prot: sp|A5DFC2|UTP25_PICGU U3 small nucleolar RNA-associated protein 25; TrEMBL-Plants: tr|A2Q4W6|A2Q4W6_MEDTR RNA-binding region RNP-1 (RNA recognition motif); Found in the gene: LotjaGi3g1v0525000_LC
Domains
2
LotjaGi4g1v0080400_LC.1
– RNA-binding protein; TAIR: AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q15415|RBY1F_HUMAN RNA-binding motif protein, Y chromosome, family 1 member F/J; TrEMBL-Plants: tr|V7ARG7|V7ARG7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0080400_LC
Domains
11
LotjaGi4g1v0088800_LC.1
– Ta11-like non-LTR retrotransposon; TAIR: AT5G36228.1 nucleic acid binding / zinc ion binding protein; Swiss-Prot: sp|A6ZVS0|MPH1_YEAS7 ATP-dependent DNA helicase MPH1; TrEMBL-Plants: tr|I3T1V9|I3T1V9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0088800_LC
Domains
7
LotjaGi4g1v0094700_LC.1
– RNA-binding protein 47; TAIR: AT3G16380.1 poly(A) binding protein 6; Swiss-Prot: sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic and nuclear; TrEMBL-Plants: tr|V7AUW5|V7AUW5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0094700_LC
Domains
14
LotjaGi4g1v0119700_LC.1
– Peroxisome biogenesis protein 12; TAIR: AT3G04460.1 peroxin-12; Swiss-Prot: sp|C5DE74|YEL1_LACTC Guanine-nucleotide exchange factor YEL1; TrEMBL-Plants: tr|A0A151TBL4|A0A151TBL4_CAJCA Uncharacterized protein family; Found in the gene: LotjaGi4g1v0119700_LC
Domains
5
LotjaGi4g1v0120800.1
– DUF4283 domain protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151RZ99|A0A151RZ99_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi4g1v0120800
Domains
9
LotjaGi4g1v0120800.2
– DUF4283 domain protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151RZ99|A0A151RZ99_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi4g1v0120800
Domains
9
LotjaGi4g1v0120800.3
– DUF4283 domain protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151RZ99|A0A151RZ99_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi4g1v0120800
Domains
9
LotjaGi4g1v0120800.4
– DUF4283 domain protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151RZ99|A0A151RZ99_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi4g1v0120800
Domains
9
LotjaGi4g1v0150500.1
– RNA recognition motif; TAIR: AT1G22760.1 poly(A) binding protein 3; Swiss-Prot: sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3; TrEMBL-Plants: tr|V7CTU7|V7CTU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0150500
Domains
12
LotjaGi4g1v0154300_LC.1
– DUF4283 domain protein; TAIR: AT5G14420.1 RING domain ligase2; Swiss-Prot: sp|P33479|ICP4_SUHVK Major viral transcription factor ICP4 homolog; TrEMBL-Plants: tr|G7IGQ6|G7IGQ6_MEDTR RNA recognition motif; Found in the gene: LotjaGi4g1v0154300_LC
Domains
3
LotjaGi4g1v0172400_LC.1
– Ta11-like non-LTR retrotransposon; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q6Q151|CYP59_ARATH Peptidyl-prolyl cis-trans isomerase CYP59; TrEMBL-Plants: tr|A0A199UAY2|A0A199UAY2_MANES Uncharacterized protein; Found in the gene: LotjaGi4g1v0172400_LC
Domains
7
LotjaGi4g1v0207500.1
– Serine/arginine-rich splicing factor-like protein, putative; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151TM91|A0A151TM91_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0207500
Domains
6
LotjaGi4g1v0207500.2
– Serine/arginine-rich splicing factor-like protein, putative; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151TM91|A0A151TM91_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0207500
Domains
6
LotjaGi4g1v0243300_LC.1
– RNA-binding family protein, putative; TAIR: AT5G54900.1 RNA-binding protein 45A; Swiss-Prot: sp|Q1HE00|EIF3G_BOMMO Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|V7BYR1|V7BYR1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0243300_LC
Domains
16
LotjaGi4g1v0259800_LC.2
– RNA-binding protein, putative; TAIR: AT1G47500.1 RNA-binding protein 47C'; Swiss-Prot: sp|Q09511|RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4; TrEMBL-Plants: tr|K7KPN6|K7KPN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0259800_LC
Domains
12
LotjaGi4g1v0265300_LC.1
– DUF4283 domain protein; TAIR: AT5G36228.1 nucleic acid binding / zinc ion binding protein; Swiss-Prot: sp|O74331|RLP1_SCHPO DNA repair protein rlp1; TrEMBL-Plants: tr|V7AUW5|V7AUW5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0265300_LC
Domains
4
LotjaGi4g1v0322600_LC.1
– DUF4283 domain protein; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|F4J738|SAD2H_ARATH Importin beta-like SAD2 homolog; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0322600_LC
Domains
5
LotjaGi5g1v0039000_LC.1
– RNA-binding family protein; TAIR: AT4G35785.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|C8V330|EIF3G_EMENI Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|G7IGQ6|G7IGQ6_MEDTR RNA recognition motif; Found in the gene: LotjaGi5g1v0039000_LC
Domains
13
LotjaGi5g1v0113200_LC.1
– Ta11-like non-LTR retrotransposon; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|M5W5K8|M5W5K8_PRUPE Uncharacterized protein; Found in the gene: LotjaGi5g1v0113200_LC
Domains
10
LotjaGi5g1v0177800_LC.1
– RNA-binding family protein, putative; TAIR: AT3G08000.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q3MHR5|SRSF2_BOVIN Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|V7BPL0|V7BPL0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0177800_LC
Domains
13
LotjaGi5g1v0238300.1
– DUF4283 domain protein; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q48513|PFAP_LEPBO Putative peptidase PfaP; TrEMBL-Plants: tr|V7B3B1|V7B3B1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0238300
Domains
8
LotjaGi5g1v0263400_LC.1
– RNA binding protein, putative; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q3MHR5|SRSF2_BOVIN Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151TZU6|A0A151TZU6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0263400_LC
Domains
14
LotjaGi6g1v0009400_LC.1
– DUF4283 domain protein; TAIR: AT5G36225.1 zinc knuckle protein; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|V7D2J6|V7D2J6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0009400_LC
Domains
5
LotjaGi6g1v0020900_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q8UEZ0|RPIA_AGRFC Ribose-5-phosphate isomerase A; TrEMBL-Plants: tr|Q1SKZ9|Q1SKZ9_MEDTR Zinc finger, CCHC-type; Found in the gene: LotjaGi6g1v0020900_LC
Domains
7
LotjaGi6g1v0081300_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q4JW95|MURG_CORJK UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0081300_LC
Domains
8
LotjaGi6g1v0084000_LC.1
– RNA binding; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q9FMG4|SC35_ARATH Serine/arginine-rich splicing factor SC35; TrEMBL-Plants: tr|K7KPN6|K7KPN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0084000_LC
Domains
13
LotjaGi6g1v0232300_LC.2
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q2SLC0|GCH4_HAHCH GTP cyclohydrolase FolE2; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0232300_LC
Domains
8
LotjaGi6g1v0257700_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|A0A151TTK8|A0A151TTK8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0257700_LC
Domains
8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 0.52