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PTHR10352

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003743
Molecular function Translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0005852
Cellular component Eukaryotic translation initiation factor 3 complex A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex. The eIF3 complex contains five conserved core subunits, and may contain several additional proteins; the non-core subunits are thought to mediate association of the complex with specific sets of mRNAs.
Subterm of

Associated Lotus transcripts 25

Transcript Name Description Predicted domains Domain count
Lj0g3v0360559.1
– PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Glycine max] gi|356567603|ref|XP_003552007.1|
Domains
16
LotjaGi1g1v0055500.1
– RNA binding protein; TAIR: AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O80678|UBA2B_ARATH UBP1-associated protein 2B; TrEMBL-Plants: tr|I1JIR8|I1JIR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0055500
Domains
13
LotjaGi1g1v0137500.1
– Eukaryotic translation initiation factor 3 subunit G; TAIR: AT3G11400.1 eukaryotic translation initiation factor 3G1; Swiss-Prot: sp|Q6DRC4|EIF3G_DANRE Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|A0A1J7G0E8|A0A1J7G0E8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0137500
Domains
19
LotjaGi1g1v0206900_LC.2
– RNA-binding family protein; TAIR: AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q29RT0|RBMX_BOVIN RNA-binding motif protein, X chromosome; TrEMBL-Plants: tr|A0A151R197|A0A151R197_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0206900_LC
Domains
13
LotjaGi1g1v0353300_LC.1
– RNA-binding protein; TAIR: AT1G58470.1 RNA-binding protein 1; Swiss-Prot: sp|Q5R1W5|SRSF2_PANTR Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151UBV0|A0A151UBV0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0353300_LC
Domains
13
LotjaGi1g1v0654100.1
– RNA binding protein; TAIR: AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O80678|UBA2B_ARATH UBP1-associated protein 2B; TrEMBL-Plants: tr|V7CUL8|V7CUL8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0654100
Domains
13
LotjaGi1g1v0654100.2
– RNA binding protein; TAIR: AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O80678|UBA2B_ARATH UBP1-associated protein 2B; TrEMBL-Plants: tr|V7CUL8|V7CUL8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0654100
Domains
13
LotjaGi1g1v0675400.1
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TVP5|A0A151TVP5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0675400
Domains
15
LotjaGi1g1v0675400.2
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TVP5|A0A151TVP5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0675400
Domains
15
LotjaGi1g1v0796100.1
– RNA-binding protein; TAIR: AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|I1NCQ2|I1NCQ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0796100
Domains
15
LotjaGi1g1v0796100.2
– RNA-binding protein; TAIR: AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|I1NCQ2|I1NCQ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0796100
Domains
15
LotjaGi2g1v0084600_LC.1
– RNA-binding protein; TAIR: AT5G19030.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic; TrEMBL-Plants: tr|A0A151UBV0|A0A151UBV0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0084600_LC
Domains
12
LotjaGi2g1v0094900_LC.2
– RNA-binding family protein; TAIR: AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9LEB4|RBP45_NICPL Polyadenylate-binding protein RBP45; TrEMBL-Plants: tr|K4CHD1|K4CHD1_SOLLC Uncharacterized protein; Found in the gene: LotjaGi2g1v0094900_LC
Domains
11
LotjaGi2g1v0103500_LC.1
– RNA binding protein; TAIR: AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q04836|CP31A_ARATH 31 kDa ribonucleoprotein, chloroplastic; TrEMBL-Plants: tr|A0A151UBV0|A0A151UBV0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0103500_LC
Domains
13
LotjaGi2g1v0307600_LC.1
– RNA-binding protein; TAIR: AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q4R2Z0|RBM46_MACFA Probable RNA-binding protein 46; TrEMBL-Plants: tr|I1NCQ2|I1NCQ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0307600_LC
Domains
8
LotjaGi2g1v0307600_LC.2
– RNA-binding protein; TAIR: AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q4R2Z0|RBM46_MACFA Probable RNA-binding protein 46; TrEMBL-Plants: tr|I1NCQ2|I1NCQ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0307600_LC
Domains
8
LotjaGi2g1v0307600_LC.3
– RNA-binding protein; TAIR: AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q4R2Z0|RBM46_MACFA Probable RNA-binding protein 46; TrEMBL-Plants: tr|A0A151TY91|A0A151TY91_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0307600_LC
Domains
9
LotjaGi2g1v0336600.1
– Eukaryotic translation initiation factor 3 subunit G; TAIR: AT3G11400.1 eukaryotic translation initiation factor 3G1; Swiss-Prot: sp|A7SKE9|EIF3G_NEMVE Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|A0A1J7G0E8|A0A1J7G0E8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0336600
Domains
18
LotjaGi3g1v0476700.1
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TNT3|A0A151TNT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0476700
Domains
15
LotjaGi3g1v0476700.2
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TNT3|A0A151TNT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0476700
Domains
15
LotjaGi3g1v0476700.3
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TNT3|A0A151TNT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0476700
Domains
15
LotjaGi3g1v0476700.4
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TNT3|A0A151TNT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0476700
Domains
15
LotjaGi4g1v0259800_LC.2
– RNA-binding protein, putative; TAIR: AT1G47500.1 RNA-binding protein 47C'; Swiss-Prot: sp|Q09511|RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4; TrEMBL-Plants: tr|K7KPN6|K7KPN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0259800_LC
Domains
12
LotjaGi5g1v0177800_LC.1
– RNA-binding family protein, putative; TAIR: AT3G08000.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q3MHR5|SRSF2_BOVIN Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|V7BPL0|V7BPL0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0177800_LC
Domains
13
LotjaGi6g1v0115100_LC.1
– RNA-binding protein; TAIR: AT2G43410.1 RNA binding protein; Swiss-Prot: sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A; TrEMBL-Plants: tr|C5X861|C5X861_SORBI Uncharacterized protein; Found in the gene: LotjaGi6g1v0115100_LC
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 4.00