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IPR033135 is a ClpP, histidine active site.
<p>The endopeptidase Clp ([ec:3.4.21.92]) from Escherichia coli cleaves peptides in various proteins in a process that requires ATP hydrolysis [[cite:PUB00002565], [cite:PUB00003609]]. Clp is a dimeric protein which consists of a proteolytic subunit (gene clpP) and either of two related ATP-binding regulatory subunits (genes clpA and clpX). ClpP is a serine protease which has a chymotrypsin-like activity. Its catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution.</p> <p>Proteases highly similar to ClpP have been found to be encoded in the genome of the chloroplast of plants and seem to be also present in other eukaryotes.</p> <p>This entry represents a conserved region containing a histidine that is involved in the catalytic triad.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic-like [Glycine max] gi|356499630|ref|XP_003518640.1| | 16 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Glycine max] gi|356531505|ref|XP_003534318.1| | 13 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Glycine max] gi|356538797|ref|XP_003537887.1| | 13 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Glycine max] gi|356538797|ref|XP_003537887.1| | 13 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like [Vitis vinifera] gi|225423749|ref|XP_002277069.1| | 19 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like isoform 1 [Glycine max] gi|356538559|ref|XP_003537770.1| | 15 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like isoform 1 [Glycine max] gi|356538559|ref|XP_003537770.1| | 14 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform 1 [Glycine max] gi|356534756|ref|XP_003535918.1| | 17 | ||
| – | ATP-dependent Clp protease proteolytic subunit [Lotus japonicus] gi|13518463|ref|NP_084822.1| | 15 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G66670.1 CLP protease proteolytic subunit 3; Swiss-Prot: sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic; TrEMBL-Plants: tr|I3S6Z8|I3S6Z8_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi1g1v0544300 | 16 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT5G45390.1 CLP protease P4; Swiss-Prot: sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic subunit 4, chloroplastic; TrEMBL-Plants: tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi2g1v0343400 | 14 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT5G23140.1 nuclear-encoded CLP protease P7; Swiss-Prot: sp|Q9FN42|CLPP2_ARATH ATP-dependent Clp protease proteolytic subunit 2, mitochondrial; TrEMBL-Plants: tr|I3SVH6|I3SVH6_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0529000 | 15 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G02560.1 nuclear encoded CLP protease 5; Swiss-Prot: sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; TrEMBL-Plants: tr|V7BH24|V7BH24_PHAVU ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi5g1v0243900 | 21 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G02560.1 nuclear encoded CLP protease 5; Swiss-Prot: sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; TrEMBL-Plants: tr|A0A1J7H2S4|A0A1J7H2S4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0243900 | 15 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G02560.1 nuclear encoded CLP protease 5; Swiss-Prot: sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; TrEMBL-Plants: tr|A0A151RYF7|A0A151RYF7_CAJCA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi5g1v0243900 | 17 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd07017 | CDD | 1 | 5.56 |