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ATP-dependent Clp protease proteolytic subunit [clpP].
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic-like [Glycine max] gi|356499630|ref|XP_003518640.1| | 16 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Glycine max] gi|356538797|ref|XP_003537887.1| | 13 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Glycine max] gi|356538797|ref|XP_003537887.1| | 13 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like isoform 1 [Glycine max] gi|356538559|ref|XP_003537770.1| | 15 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like [Glycine max] gi|356514168|ref|XP_003525778.1| | 11 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G66670.1 CLP protease proteolytic subunit 3; Swiss-Prot: sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic; TrEMBL-Plants: tr|I3S6Z8|I3S6Z8_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi1g1v0544300 | 16 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT5G45390.1 CLP protease P4; Swiss-Prot: sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic subunit 4, chloroplastic; TrEMBL-Plants: tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi2g1v0343400 | 14 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT5G23140.1 nuclear-encoded CLP protease P7; Swiss-Prot: sp|Q9FN42|CLPP2_ARATH ATP-dependent Clp protease proteolytic subunit 2, mitochondrial; TrEMBL-Plants: tr|I3SVH6|I3SVH6_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0529000 | 15 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G12410.1 CLP protease proteolytic subunit 2; Swiss-Prot: sp|Q9XJ36|CLPR2_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic; TrEMBL-Plants: tr|I1K0I6|I1K0I6_SOYBN ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi4g1v0212300 | 11 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G12410.1 CLP protease proteolytic subunit 2; Swiss-Prot: sp|Q9XJ36|CLPR2_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7I6X0|A0A1J7I6X0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212300 | 11 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G12410.1 CLP protease proteolytic subunit 2; Swiss-Prot: sp|Q9XJ36|CLPR2_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7I6X0|A0A1J7I6X0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212300 | 11 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G02560.1 nuclear encoded CLP protease 5; Swiss-Prot: sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; TrEMBL-Plants: tr|V7BH24|V7BH24_PHAVU ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi5g1v0243900 | 21 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G02560.1 nuclear encoded CLP protease 5; Swiss-Prot: sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; TrEMBL-Plants: tr|A0A1J7H2S4|A0A1J7H2S4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0243900 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd07017 | CDD | 1 | 6.25 |