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IPR023562 is a Clp protease proteolytic subunit /Translocation-enhancing protein TepA.
<p>This entry includes peptidases from the MEROPS peptidase family S14, including ClpP endopeptidase and translocation-enhancing protein TepA.</p> <p>ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin [[cite:PUB00002564]]. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [[cite:PUB00002564]], although the P subunit alone does possess some catalytic activity. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic-like [Glycine max] gi|356499630|ref|XP_003518640.1| | 8 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic-like [Glycine max] gi|356499630|ref|XP_003518640.1| | 16 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Glycine max] gi|356572984|ref|XP_003554645.1| | 14 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Glycine max] gi|356531505|ref|XP_003534318.1| | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit [Medicago truncatula] gi|357484629|ref|XP_003612602.1| | 11 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Glycine max] gi|356538797|ref|XP_003537887.1| | 13 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Glycine max] gi|356538797|ref|XP_003537887.1| | 13 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like [Vitis vinifera] gi|225423749|ref|XP_002277069.1| | 19 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like isoform 1 [Glycine max] gi|356538559|ref|XP_003537770.1| | 15 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like isoform 1 [Glycine max] gi|356538559|ref|XP_003537770.1| | 14 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like [Glycine max] gi|356563393|ref|XP_003549948.1| | 12 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like [Glycine max] gi|356514168|ref|XP_003525778.1| | 11 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform 1 [Glycine max] gi|356534756|ref|XP_003535918.1| | 17 | ||
| – | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like [Glycine max] gi|356575728|ref|XP_003555989.1| | 10 | ||
| – | ATP-dependent Clp protease proteolytic subunit [Lotus japonicus] gi|13518463|ref|NP_084822.1| | 7 | ||
| – | ATP-dependent Clp protease proteolytic subunit [Lotus japonicus] gi|13518463|ref|NP_084822.1| | 15 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G66670.1 CLP protease proteolytic subunit 3; Swiss-Prot: sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic; TrEMBL-Plants: tr|I3S6Z8|I3S6Z8_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi1g1v0544300 | 16 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G09130.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Swiss-Prot: sp|Q8L770|CLPR3_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic; TrEMBL-Plants: tr|I1NBX9|I1NBX9_SOYBN ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi1g1v0770700 | 14 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G09130.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Swiss-Prot: sp|Q8L770|CLPR3_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic; TrEMBL-Plants: tr|I1NBX9|I1NBX9_SOYBN ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi1g1v0770700 | 14 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT5G45390.1 CLP protease P4; Swiss-Prot: sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic subunit 4, chloroplastic; TrEMBL-Plants: tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi2g1v0343400 | 14 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT5G45390.1 CLP protease P4; Swiss-Prot: sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic subunit 4, chloroplastic; TrEMBL-Plants: tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0168400_LC | 7 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G11750.1 CLP protease proteolytic subunit 6; Swiss-Prot: sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; TrEMBL-Plants: tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0506800 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT5G23140.1 nuclear-encoded CLP protease P7; Swiss-Prot: sp|Q9FN42|CLPP2_ARATH ATP-dependent Clp protease proteolytic subunit 2, mitochondrial; TrEMBL-Plants: tr|I3SVH6|I3SVH6_LOTJA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi3g1v0529000 | 15 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT4G17040.1 CLP protease R subunit 4; Swiss-Prot: sp|Q8LB10|CLPR4_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic; TrEMBL-Plants: tr|V7CEM3|V7CEM3_PHAVU ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi4g1v0195800 | 16 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G12410.1 CLP protease proteolytic subunit 2; Swiss-Prot: sp|Q9XJ36|CLPR2_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic; TrEMBL-Plants: tr|I1K0I6|I1K0I6_SOYBN ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi4g1v0212300 | 11 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G12410.1 CLP protease proteolytic subunit 2; Swiss-Prot: sp|Q9XJ36|CLPR2_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7I6X0|A0A1J7I6X0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212300 | 13 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G12410.1 CLP protease proteolytic subunit 2; Swiss-Prot: sp|Q9XJ36|CLPR2_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7I6X0|A0A1J7I6X0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212300 | 11 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G12410.1 CLP protease proteolytic subunit 2; Swiss-Prot: sp|Q9XJ36|CLPR2_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7I6X0|A0A1J7I6X0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212300 | 11 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G02560.1 nuclear encoded CLP protease 5; Swiss-Prot: sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; TrEMBL-Plants: tr|V7BH24|V7BH24_PHAVU ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi5g1v0243900 | 21 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G02560.1 nuclear encoded CLP protease 5; Swiss-Prot: sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; TrEMBL-Plants: tr|A0A1J7H2S4|A0A1J7H2S4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0243900 | 15 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G02560.1 nuclear encoded CLP protease 5; Swiss-Prot: sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; TrEMBL-Plants: tr|A0A151RYF7|A0A151RYF7_CAJCA ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi5g1v0243900 | 17 | ||
| – | ATP-dependent Clp protease proteolytic subunit; TAIR: AT1G49970.1 CLP protease proteolytic subunit 1; Swiss-Prot: sp|Q9XJ35|CLPR1_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic; TrEMBL-Plants: tr|A0A0B2SC32|A0A0B2SC32_GLYSO ATP-dependent Clp protease proteolytic subunit; Found in the gene: LotjaGi5g1v0323000 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd07017 | CDD | 1 | 2.94 |