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IPR036168 is a AP-2 complex subunit mu, C-terminal superfamily.
<p>This superfamily describes the C-terminal domain of the Mu subunit (Mu2-adaptin, AP50) of adaptor protein (AP) complexes AP-1, AP-2, AP-3, and AP-4. It has an elongated, banana-shaped, all β-sheet structure. It can be considered as two β-sandwich subdomains (A and B), with subdomain B inserted between strands 6 and 15 of subdomain A, and joined edge to edge such that the convex surface is a continuous nine-stranded mixed β-sheet that runs the whole length of the molecule. The tyrosine based signal binds to a site on the surface of two parallel β-sheet strands (β1 and β16) in subdomain A [[cite:PUB00057692], [cite:PUB00018527]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | AP-4 complex subunit mu; TAIR: AT4G24550.2 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q9SB50|AP4M_ARATH AP-4 complex subunit mu; TrEMBL-Plants: tr|V7B6Q9|V7B6Q9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0137900 | 16 | ||
| – | AP-4 complex subunit mu; TAIR: AT4G24550.2 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q9SB50|AP4M_ARATH AP-4 complex subunit mu; TrEMBL-Plants: tr|I1JT85|I1JT85_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0422200 | 18 | ||
| – | AP-3 complex subunit mu; TAIR: AT1G56590.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|F4I562|AP3M_ARATH AP-3 complex subunit mu; TrEMBL-Plants: tr|A0A0B2P3M3|A0A0B2P3M3_GLYSO AP-3 complex subunit mu-1; Found in the gene: LotjaGi1g1v0748800 | 18 | ||
| – | AP-3 complex subunit mu; TAIR: AT1G56590.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|F4I562|AP3M_ARATH AP-3 complex subunit mu; TrEMBL-Plants: tr|A0A151TW96|A0A151TW96_CAJCA AP-3 complex subunit mu-1; Found in the gene: LotjaGi1g1v0748800 | 18 | ||
| – | AP-1 complex subunit mu-1; TAIR: AT1G60780.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2; TrEMBL-Plants: tr|I1J553|I1J553_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0323900 | 21 | ||
| – | AP-2 complex subunit mu; TAIR: AT5G46630.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O23140|AP2M_ARATH AP-2 complex subunit mu; TrEMBL-Plants: tr|I3SG06|I3SG06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415100 | 19 | ||
| – | AP-2 complex subunit mu; TAIR: AT5G46630.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O23140|AP2M_ARATH AP-2 complex subunit mu; TrEMBL-Plants: tr|A0A0R0JTT3|A0A0R0JTT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0415100 | 19 | ||
| – | AP-2 complex subunit mu; TAIR: AT5G46630.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O23140|AP2M_ARATH AP-2 complex subunit mu; TrEMBL-Plants: tr|I3SG06|I3SG06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415100 | 19 | ||
| – | AP-2 complex subunit mu; TAIR: AT5G46630.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O23140|AP2M_ARATH AP-2 complex subunit mu; TrEMBL-Plants: tr|I3SG06|I3SG06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415100 | 19 | ||
| – | AP-1 complex subunit mu-1; TAIR: AT1G60780.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2; TrEMBL-Plants: tr|I1N1K1|I1N1K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0156900 | 21 | ||
| – | Ap-5 complex subunit mu; TAIR: AT2G20790.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q8W0Z6|AP5M_ARATH AP-5 complex subunit mu; TrEMBL-Plants: tr|A0A151STS3|A0A151STS3_CAJCA MHD domain-containing death-inducing protein; Found in the gene: LotjaGi4g1v0348900 | 9 | ||
| – | Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|G7II11|G7II11_MEDTR Coatomer subunit delta-like protein; Found in the gene: LotjaGi5g1v0343900 | 15 | ||
| – | Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|G7II11|G7II11_MEDTR Coatomer subunit delta-like protein; Found in the gene: LotjaGi5g1v0343900 | 15 | ||
| – | Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|A0A1J7FSC8|A0A1J7FSC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350800 | 15 | ||
| – | Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|A0A1J7FSC8|A0A1J7FSC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350800 | 15 | ||
| – | Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|A0A1J7FSC8|A0A1J7FSC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350800 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 6.25 |