Domain Predictions — View

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PF17855

Source: Pfam

Description

MCM AAA-lid domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0693900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT3G09660.1 minichromosome maintenance 8; Swiss-Prot: sp\|Q9SF37\|MCM8_ARATH Probable DNA helicase MCM8; TrEMBL-Plants: tr\|K7MYY7\|K7MYY7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693900	Domains Coil G3DSA:2.20.28.10 G3DSA:2.40.50.140 IPR001208 IPR003593 IPR012340 IPR027417 IPR031327 IPR033762 IPR041562 PF00493 PF17207 PF17855 PR01657 PS50051 PTHR11630 PTHR11630:SF47 SM00350 SM00382 SSF50249 SSF52540 cd17759 mobidb-lite	23
LotjaGi1g1v0693900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT3G09660.1 minichromosome maintenance 8; Swiss-Prot: sp\|Q9SF37\|MCM8_ARATH Probable DNA helicase MCM8; TrEMBL-Plants: tr\|K7MYY7\|K7MYY7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693900	Domains Coil G3DSA:2.20.28.10 G3DSA:2.40.50.140 IPR001208 IPR003593 IPR012340 IPR027417 IPR031327 IPR033762 IPR041562 PF00493 PF17207 PF17855 PR01657 PS50051 PTHR11630 PTHR11630:SF47 SM00350 SM00382 SSF50249 SSF52540 cd17759 mobidb-lite	23
LotjaGi1g1v0693900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT3G09660.1 minichromosome maintenance 8; Swiss-Prot: sp\|Q9SF37\|MCM8_ARATH Probable DNA helicase MCM8; TrEMBL-Plants: tr\|K7MYY7\|K7MYY7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693900	Domains Coil G3DSA:2.20.28.10 G3DSA:2.40.50.140 IPR001208 IPR003593 IPR012340 IPR027417 IPR031327 IPR033762 IPR041562 PF00493 PF17207 PF17855 PR01657 PS50051 PTHR11630 PTHR11630:SF47 SM00350 SM00382 SSF50249 SSF52540 cd17759 mobidb-lite	23
LotjaGi1g1v0693900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT3G09660.1 minichromosome maintenance 8; Swiss-Prot: sp\|Q9SF37\|MCM8_ARATH Probable DNA helicase MCM8; TrEMBL-Plants: tr\|K7MYY7\|K7MYY7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693900	Domains Coil G3DSA:2.20.28.10 G3DSA:2.40.50.140 IPR001208 IPR003593 IPR012340 IPR027417 IPR031327 IPR033762 IPR041562 PF00493 PF17207 PF17855 PR01657 PS50051 PTHR11630 PTHR11630:SF47 SM00350 SM00382 SSF50249 SSF52540 cd17759 mobidb-lite	23
LotjaGi1g1v0693900.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT3G09660.1 minichromosome maintenance 8; Swiss-Prot: sp\|Q9SF37\|MCM8_ARATH Probable DNA helicase MCM8; TrEMBL-Plants: tr\|K7MYY7\|K7MYY7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693900	Domains Coil G3DSA:2.20.28.10 G3DSA:2.40.50.140 IPR001208 IPR003593 IPR012340 IPR027417 IPR031327 IPR033762 IPR041562 PF00493 PF17207 PF17855 PR01657 PS50051 PTHR11630 PTHR11630:SF47 SM00350 SM00382 SSF50249 SSF52540 cd17759 mobidb-lite	23
LotjaGi1g1v0760100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT4G02060.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|B8BMI1\|MCM7_ORYSI DNA replication licensing factor MCM7; TrEMBL-Plants: tr\|I1JQR6\|I1JQR6_SOYBN DNA helicase; Found in the gene: LotjaGi1g1v0760100	Domains G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.30.1640.10 G3DSA:3.40.50.300 IPR001208 IPR008050 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041562 PF00493 PF14551 PF17207 PF17855 PR01657 PR01663 PS00847 PS50051 PTHR11630 PTHR11630:SF26 SM00350 SSF50249 SSF52540 cd17758	27
LotjaGi1g1v0760100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT4G02060.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|B8BMI1\|MCM7_ORYSI DNA replication licensing factor MCM7; TrEMBL-Plants: tr\|I1JQR6\|I1JQR6_SOYBN DNA helicase; Found in the gene: LotjaGi1g1v0760100	Domains G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.40.50.300 IPR001208 IPR008050 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041562 PF00493 PF14551 PF17207 PF17855 PR01657 PR01663 PS00847 PS50051 PTHR11630 PTHR11630:SF26 SM00350 SSF50249 SSF52540 cd17758	26
LotjaGi3g1v0262900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|Q0WVF5\|MCM4_ARATH DNA replication licensing factor MCM4; TrEMBL-Plants: tr\|A0A1J7GYJ8\|A0A1J7GYJ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0262900	Domains G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.30.1640.10 G3DSA:3.40.50.300 IPR001208 IPR003593 IPR008047 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041562 PF00493 PF14551 PF17207 PF17855 PR01657 PR01660 PS00847 PS50051 PTHR11630 PTHR11630:SF66 SM00350 SM00382 SSF50249 SSF52540 cd17755 mobidb-lite	30
LotjaGi3g1v0262900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|Q0WVF5\|MCM4_ARATH DNA replication licensing factor MCM4; TrEMBL-Plants: tr\|A0A1J7GYJ8\|A0A1J7GYJ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0262900	Domains G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.30.1640.10 G3DSA:3.40.50.300 IPR001208 IPR003593 IPR008047 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041562 PF00493 PF14551 PF17207 PF17855 PR01657 PR01660 PS00847 PS50051 PTHR11630 PTHR11630:SF66 SM00350 SM00382 SSF50249 SSF52540 cd17755 mobidb-lite	30
LotjaGi4g1v0023500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT5G46280.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|Q9FL33\|MCM3_ARATH DNA replication licensing factor MCM3; TrEMBL-Plants: tr\|V7CNV8\|V7CNV8_PHAVU DNA helicase; Found in the gene: LotjaGi4g1v0023500	Domains Coil G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.30.1640.10 IPR001208 IPR003593 IPR008046 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041562 PF00493 PF14551 PF17207 PF17855 PR01657 PR01659 PS00847 PS50051 PTHR11630 PTHR11630:SF96 SM00350 SM00382 SSF50249 SSF52540 cd17754 mobidb-lite	30
LotjaGi4g1v0023500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT5G46280.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|Q9FL33\|MCM3_ARATH DNA replication licensing factor MCM3; TrEMBL-Plants: tr\|V7CNV8\|V7CNV8_PHAVU DNA helicase; Found in the gene: LotjaGi4g1v0023500	Domains Coil G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.30.1640.10 IPR001208 IPR003593 IPR008046 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041562 PF00493 PF14551 PF17207 PF17855 PR01657 PR01659 PS00847 PS50051 PTHR11630 PTHR11630:SF96 SM00350 SM00382 SSF50249 SSF52540 cd17754 mobidb-lite	30
LotjaGi4g1v0283800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT2G07690.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|O80786\|MCM5_ARATH DNA replication licensing factor MCM5; TrEMBL-Plants: tr\|B3GNI3\|B3GNI3_PEA DNA helicase; Found in the gene: LotjaGi4g1v0283800	Domains Coil G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.30.1640.10 G3DSA:3.40.50.300 IPR001208 IPR008048 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041562 PF00493 PF14551 PF17207 PF17855 PR01657 PR01661 PS00847 PS50051 PTHR11630 PTHR11630:SF42 SM00350 SSF50249 SSF52540 cd17756	28
LotjaGi4g1v0332400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT1G44900.1 minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|B8BKI8\|MCM2_ORYSI DNA replication licensing factor MCM2; TrEMBL-Plants: tr\|V7C891\|V7C891_PHAVU DNA helicase; Found in the gene: LotjaGi4g1v0332400	Domains G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.30.1640.10 G3DSA:3.40.50.300 IPR001208 IPR008045 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041562 PF00493 PF12619 PF14551 PF17207 PF17855 PR01657 PR01658 PS00847 PS50051 PTHR11630 PTHR11630:SF44 SM00350 SSF50249 SSF52540 cd17753 mobidb-lite	29
LotjaGi6g1v0247200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT5G44635.1 minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp\|F4KAB8\|MCM6_ARATH DNA replication licensing factor MCM6; TrEMBL-Plants: tr\|A0A072TUF1\|A0A072TUF1_MEDTR DNA helicase; Found in the gene: LotjaGi6g1v0247200	Domains Coil G3DSA:1.20.58.870 G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.30.1640.10 G3DSA:3.40.50.300 IPR001208 IPR008049 IPR012340 IPR018525 IPR027417 IPR027925 IPR031327 IPR033762 IPR041024 IPR041562 PF00493 PF14551 PF17207 PF17855 PF18263 PR01657 PR01662 PS00847 PS50051 PTHR11630 PTHR11630:SF43 SM00350 SSF50249 SSF52540 cd17757 mobidb-lite	32
LotjaGi6g1v0351000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT2G14050.1 minichromosome maintenance 9; Swiss-Prot: sp\|F4IFF3\|MCM9_ARATH Probable DNA helicase MCM9; TrEMBL-Plants: tr\|K7M9S9\|K7M9S9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0351000	Domains G3DSA:2.20.28.10 G3DSA:2.40.50.140 G3DSA:3.40.50.300 IPR001208 IPR003593 IPR012340 IPR027417 IPR031327 IPR033762 IPR041562 PF00493 PF17207 PF17855 PR01657 PS50051 PTHR11630 PTHR11630:SF48 SM00350 SM00382 SSF50249 SSF52540 cd17760	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd17760	CDD	1	6.67