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PS00686

Source: ProSitePatterns

Description

NF-YA/HAP2 subunit signature.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0016602
Cellular component CCAAT-binding factor complex A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; functions as both an activator and a repressor, depending on its interacting cofactors. Typically trimeric consisting of NFYA, NFYB and NFYC subunits. In Saccharomyces, it activates the transcription of genes in response to growth in a nonfermentable carbon source and consists of four known subunits: HAP2, HAP3, HAP4 and HAP5.
Subterm of

Associated Lotus transcripts 16

Transcript Name Description Predicted domains Domain count
Lj0g3v0252369.1
– PREDICTED: nuclear transcription factor Y subunit A-3-like isoform X1 [Cicer arietinum] gi|502165192|ref|XP_004513462.1|
Domains
9
Lj0g3v0252369.2
–
Domains
9
Lj2g3v3336090.1
– PREDICTED: nuclear transcription factor Y subunit A-1-like [Glycine max] gi|356566267|ref|XP_003551355.1|
Domains
10
Lj3g3v0338970.1
– PREDICTED: nuclear transcription factor Y subunit A-3-like [Cicer arietinum] gi|502081419|ref|XP_004486861.1|
Domains
10
Lj3g3v0338970.3
– PREDICTED: nuclear transcription factor Y subunit A-3-like [Cicer arietinum] gi|502081419|ref|XP_004486861.1|
Domains
10
Lj3g3v2657800.1
– PREDICTED: nuclear transcription factor Y subunit A-3-like isoform X1 [Cicer arietinum] gi|502156346|ref|XP_004510428.1|
Domains
10
Lj4g3v2179250.1
– Nuclear transcription factor Y subunit A-3 [Arachis hypogaea] gi|469609862|gb|AGH62008.1|
Domains
9
Lj6g3v0647470.1
– PREDICTED: nuclear transcription factor Y subunit A-1-like [Glycine max] gi|356566267|ref|XP_003551355.1|
Domains
10
LotjaGi1g1v0011200.1
– Nuclear transcription factor Y subunit; TAIR: AT5G12840.2 nuclear factor Y, subunit A1; Swiss-Prot: sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1; TrEMBL-Plants: tr|K7MQE5|K7MQE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0011200
Domains
10
LotjaGi3g1v0029300.1
– Nuclear transcription factor Y subunit; TAIR: AT1G17590.1 nuclear factor Y, subunit A8; Swiss-Prot: sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3; TrEMBL-Plants: tr|G7IS22|G7IS22_MEDTR CCAAT-binding transcription factor; Found in the gene: LotjaGi3g1v0029300
Domains
10
LotjaGi3g1v0029300.2
– Nuclear transcription factor Y subunit; TAIR: AT1G17590.1 nuclear factor Y, subunit A8; Swiss-Prot: sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8; TrEMBL-Plants: tr|G7IS22|G7IS22_MEDTR CCAAT-binding transcription factor; Found in the gene: LotjaGi3g1v0029300
Domains
10
LotjaGi3g1v0417600.1
– Nuclear transcription factor Y subunit; TAIR: AT1G72830.1 nuclear factor Y, subunit A3; Swiss-Prot: sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3; TrEMBL-Plants: tr|A0A151T9E0|A0A151T9E0_CAJCA Nuclear transcription factor Y subunit A-3; Found in the gene: LotjaGi3g1v0417600
Domains
10
LotjaGi3g1v0417600.2
– Nuclear transcription factor Y subunit; TAIR: AT1G72830.1 nuclear factor Y, subunit A3; Swiss-Prot: sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3; TrEMBL-Plants: tr|A0A151T9E0|A0A151T9E0_CAJCA Nuclear transcription factor Y subunit A-3; Found in the gene: LotjaGi3g1v0417600
Domains
9
LotjaGi4g1v0385700.1
– Nuclear transcription factor Y subunit; TAIR: AT1G30500.2 nuclear factor Y, subunit A7; Swiss-Prot: sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7; TrEMBL-Plants: tr|C6TCG7|C6TCG7_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0385700
Domains
9
LotjaGi6g1v0135700.1
– Nuclear transcription factor Y subunit; TAIR: AT5G12840.2 nuclear factor Y, subunit A1; Swiss-Prot: sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1; TrEMBL-Plants: tr|A0A0B2REF6|A0A0B2REF6_GLYSO Nuclear transcription factor Y subunit A-1; Found in the gene: LotjaGi6g1v0135700
Domains
10
LotjaGi6g1v0227300.1
– Nuclear transcription factor Y subunit; TAIR: AT1G54160.1 nuclear factor Y, subunit A5; Swiss-Prot: sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5; TrEMBL-Plants: tr|A0A0B2PSG7|A0A0B2PSG7_GLYSO Nuclear transcription factor Y subunit A-3; Found in the gene: LotjaGi6g1v0227300
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 6.25