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PS50105

Source: ProSiteProfiles

Description

SAM domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Associated Lotus transcripts 20

Transcript Name Description Predicted domains Domain count
Lj1g3v1464140.1
– Bicaudal C-like protein [Medicago truncatula] gi|357520541|ref|XP_003630559.1|
Domains
10
Lj1g3v1798520.1
– PREDICTED: DNA cross-link repair protein SNM1-like [Cicer arietinum] gi|502132540|ref|XP_004501410.1|
Domains
16
Lj1g3v3137960.1
– SAM domain family protein [Medicago truncatula] gi|357502717|ref|XP_003621647.1|
Domains
10
Lj1g3v4763560.1
– Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana] gi|18399394|ref|NP_566404.1|
Domains
11
Lj2g3v1368240.2
– SAM domain family protein [Medicago truncatula] gi|357486169|ref|XP_003613372.1|
Domains
10
Lj2g3v3337520.1
– F17A17.10 protein [Theobroma cacao] gi|508701574|gb|EOX93470.1|
Domains
7
Lj3g3v0730120.1
– Sterile alpha motif domain-containing protein isoform 1 [Theobroma cacao] gi|508701987|gb|EOX93883.1|
Domains
11
Lj3g3v0730120.2
– Sterile alpha motif domain-containing protein isoform 1 [Theobroma cacao] gi|508701987|gb|EOX93883.1|
Domains
11
Lj4g3v0147780.1
– Bicaudal C-like protein [Medicago truncatula] gi|357520541|ref|XP_003630559.1|
Domains
10
Lj4g3v2882140.1
– Bicaudal C-like protein [Medicago truncatula] gi|357520541|ref|XP_003630559.1|
Domains
10
LotjaGi1g1v0009700.1
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT3G07760.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|P18160|SPLA_DICDI Dual specificity protein kinase splA; TrEMBL-Plants: tr|I3S178|I3S178_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0009700
Domains
7
LotjaGi1g1v0009700.2
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT3G07760.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|P18160|SPLA_DICDI Dual specificity protein kinase splA; TrEMBL-Plants: tr|I3S178|I3S178_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0009700
Domains
7
LotjaGi1g1v0009700.3
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT3G07760.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|P18160|SPLA_DICDI Dual specificity protein kinase splA; TrEMBL-Plants: tr|I3S178|I3S178_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0009700
Domains
7
LotjaGi1g1v0334600.1
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|Q9H694|BICC1_HUMAN Protein bicaudal C homolog 1; TrEMBL-Plants: tr|I1JXP2|I1JXP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0334600
Domains
11
LotjaGi1g1v0372700.1
– DNA cross-link repair 1A protein; TAIR: AT2G45700.1 sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|Q38961|SNM1_ARATH DNA cross-link repair protein SNM1; TrEMBL-Plants: tr|A0A151QYV3|A0A151QYV3_CAJCA DNA cross-link repair 1A protein; Found in the gene: LotjaGi1g1v0372700
Domains
21
LotjaGi1g1v0529300.1
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|Q24009|BICC_DROME Protein bicaudal C; TrEMBL-Plants: tr|I1KWR9|I1KWR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0529300
Domains
11
LotjaGi1g1v0741900.1
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT3G11890.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|Q24009|BICC_DROME Protein bicaudal C; TrEMBL-Plants: tr|I1JQD2|I1JQD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0741900
Domains
11
LotjaGi2g1v0314000.1
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT1G70180.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein; TrEMBL-Plants: tr|I3S5V0|I3S5V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0314000
Domains
10
LotjaGi3g1v0085200.1
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT3G07170.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein; TrEMBL-Plants: tr|I3T340|I3T340_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0085200
Domains
11
LotjaGi4g1v0420200.1
– Sterile alpha motif (SAM) domain-containing protein; TAIR: AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|Q9IA00|BIC1A_XENLA Protein bicaudal C homolog 1-A; TrEMBL-Plants: tr|G7LI38|G7LI38_MEDTR SAM domain protein; Found in the gene: LotjaGi4g1v0420200
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.00