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SM01390

Source: SMART

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0019843
Molecular function RRNA binding Interacting selectively and non-covalently with ribosomal RNA.
Subterm of

Associated Lotus transcripts 10

Transcript Name Description Predicted domains Domain count
Lj0g3v0054209.1
– Ribosomal protein S4 [Lotus japonicus] gi|13518426|ref|NP_084786.1|
Domains
24
Lj0g3v0292979.1
– PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like [Glycine max] gi|356535851|ref|XP_003536456.1|
Domains
6
Lj4g3v1635200.1
– PREDICTED: 40S ribosomal protein S9-2-like [Cicer arietinum] gi|502152082|ref|XP_004508755.1|
Domains
18
LotjaGi1g1v0218000.1
– 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|I3T2G7|I3T2G7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0218000
Domains
19
LotjaGi3g1v0492600.1
– 30S ribosomal protein S4; TAIR: AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; Swiss-Prot: sp|P32899|IMP3_YEAST U3 small nucleolar ribonucleoprotein protein IMP3; TrEMBL-Plants: tr|I3SIJ8|I3SIJ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492600
Domains
14
LotjaGi4g1v0130400.1
– 30S ribosomal protein S4; TAIR: AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; Swiss-Prot: sp|P32899|IMP3_YEAST U3 small nucleolar ribonucleoprotein protein IMP3; TrEMBL-Plants: tr|I3SIJ8|I3SIJ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0130400
Domains
14
LotjaGi4g1v0130400.3
– 30S ribosomal protein S4; TAIR: AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; Swiss-Prot: sp|P32899|IMP3_YEAST U3 small nucleolar ribonucleoprotein protein IMP3; TrEMBL-Plants: tr|I3SIJ8|I3SIJ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0130400
Domains
14
LotjaGi4g1v0249100.1
– 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|V7CDF1|V7CDF1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0249100
Domains
19
LotjaGi4g1v0249100.2
– 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|V7CDF1|V7CDF1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0249100
Domains
19
LotjaGi4g1v0249100.3
– 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|A0A0B2SUR7|A0A0B2SUR7_GLYSO 40S ribosomal protein S9-2; Found in the gene: LotjaGi4g1v0249100
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00165 CDD 1 10.00