Domain Predictions — View

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cd00862

Source: CDD

Description

ProRS_anticodon_zinc

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 10

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0296119.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: proline--tRNA ligase-like [Cicer arietinum] gi\|502132994\|ref\|XP_004501611.1\|	Domains G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002316 IPR004154 IPR004499 IPR006195 IPR033721 MF_01571 NON_CYTOPLASMIC_DOMAIN PF00587 PF03129 PR01046 PS50862 PTHR11451 PTHR11451:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52954 SSF55681 SignalP-TM_GRAM_POSITIVE TIGR00408 cd00778 cd00862 mobidb-lite	27
Lj1g3v4830240.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Glycine max] gi\|356572846\|ref\|XP_003554576.1\|	Domains Coil G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002316 IPR004154 IPR004499 IPR006195 IPR016061 IPR017449 IPR033721 MF_01571 PF00587 PF03129 PF09180 PR01046 PS50862 PTHR11451 PTHR11451:SF21 SM00946 SSF52954 SSF55681 SSF64586 TIGR00408 cd00778 cd00862 mobidb-lite	28
Lj2g3v1468010.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Glycine max] gi\|356572846\|ref\|XP_003554576.1\|	Domains Coil G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR004154 IPR004499 IPR006195 IPR016061 IPR017449 IPR033721 MF_01571 PF00587 PF03129 PF09180 PS50862 PTHR11451 PTHR11451:SF21 SM00946 SSF52954 SSF55681 SSF64586 TIGR00408 cd00778 cd00862 mobidb-lite	26
LotjaGi1g1v0754600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Proline--tRNA ligase; TAIR: AT3G62120.3 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp\|Q9M1R2\|SYPC_ARATH Proline--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr\|I1NBI4\|I1NBI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0754600	Domains Coil G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002316 IPR004154 IPR004499 IPR006195 IPR016061 IPR017449 IPR033721 IPR036621 MF_01571 PF00587 PF03129 PF09180 PR01046 PS50862 PTHR43382 PTHR43382:SF6 SM00946 SSF52954 SSF55681 SSF64586 TIGR00408 cd00778 cd00862 mobidb-lite	29
LotjaGi1g1v0754600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Proline--tRNA ligase; TAIR: AT3G62120.3 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp\|Q9M1R2\|SYPC_ARATH Proline--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr\|I1NBI4\|I1NBI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0754600	Domains Coil G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002316 IPR004154 IPR004499 IPR006195 IPR016061 IPR017449 IPR033721 IPR036621 MF_01571 PF00587 PF03129 PF09180 PR01046 PS50862 PTHR43382 PTHR43382:SF6 SM00946 SSF52954 SSF55681 SSF64586 TIGR00408 cd00778 cd00862 mobidb-lite	29
LotjaGi2g1v0122700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Proline--tRNA ligase; TAIR: AT5G52520.1 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp\|Q9FYR6\|SYPM_ARATH Proline--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|V7C4B0\|V7C4B0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0122700	Domains G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002316 IPR004154 IPR004499 IPR006195 IPR016061 IPR017449 IPR033721 IPR036621 MF_01571 NON_CYTOPLASMIC_DOMAIN PF00587 PF03129 PF09180 PR01046 PS50862 PTHR43382 PTHR43382:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00946 SSF52954 SSF55681 SSF64586 SignalP-TM TIGR00408 cd00778 cd00862	33
LotjaGi2g1v0122700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Proline--tRNA ligase; TAIR: AT5G52520.1 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp\|Q9FYR6\|SYPM_ARATH Proline--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|I1L332\|I1L332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0122700	Domains G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR004154 IPR016061 IPR017449 IPR036621 PF03129 PF09180 PTHR43382 PTHR43382:SF3 SM00946 SSF52954 SSF55681 SSF64586 cd00862	16
LotjaGi2g1v0330900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Proline--tRNA ligase; TAIR: AT3G62120.3 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp\|Q9M1R2\|SYPC_ARATH Proline--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr\|I1NBI4\|I1NBI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0330900	Domains Coil G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR004154 IPR004499 IPR006195 IPR016061 IPR017449 IPR033721 IPR036621 MF_01571 PF00587 PF03129 PF09180 PS50862 PTHR43382 PTHR43382:SF6 SM00946 SSF52954 SSF55681 SSF64586 TIGR00408 cd00778 cd00862 mobidb-lite	27
LotjaGi6g1v0009800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Proline--tRNA ligase; TAIR: AT3G62120.3 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp\|Q9M1R2\|SYPC_ARATH Proline--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr\|I1NBI4\|I1NBI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0009800	Domains Coil G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002316 IPR004154 IPR004499 IPR006195 IPR016061 IPR017449 IPR033721 IPR036621 MF_01571 PF00587 PF03129 PF09180 PR01046 PS50862 PTHR43382 PTHR43382:SF6 SM00946 SSF52954 SSF55681 SSF64586 TIGR00408 cd00778 cd00862 mobidb-lite	29
LotjaGi6g1v0009800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Proline--tRNA ligase; TAIR: AT3G62120.3 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp\|Q9M1R2\|SYPC_ARATH Proline--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr\|I1NBI4\|I1NBI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0009800	Domains Coil G3DSA:3.30.110.30 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR002314 IPR002316 IPR004154 IPR004499 IPR006195 IPR016061 IPR017449 IPR033721 IPR036621 MF_01571 PF00587 PF03129 PF09180 PR01046 PS50862 PTHR43382 PTHR43382:SF6 SM00946 SSF52954 SSF55681 SSF64586 TIGR00408 cd00778 cd00862 mobidb-lite	29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	10.00