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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3375780 |
| Transcript ID | Lj3g3v3375780.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| PANTHER | 6 | 315 | 310 | 0 | – | |
| PANTHER | 6 | 315 | 310 | 0 | – | |
| Phobius | 8 | 18 | 11 | – | – | |
| Phobius | 19 | 25 | 7 | – | – | |
| Phobius | 26 | 643 | 618 | – | – | |
| Pfam | 28 | 71 | 44 | 5.40E-09 | ||
| Gene3D | 31 | 229 | 199 | 7.30E-41 | ||
| SUPERFAMILY | 79 | 424 | 346 | 7.85E-62 | – | |
| SMART | 121 | 145 | 25 | 180 | ||
| Gene3D | 230 | 369 | 140 | 4.80E-26 | ||
| Pfam | 245 | 267 | 23 | 1.4 | ||
| SMART | 267 | 291 | 25 | 91 | ||
| SMART | 339 | 363 | 25 | 49 | ||
| SUPERFAMILY | 348 | 601 | 254 | 1.06E-44 | – | |
| PANTHER | 354 | 970 | 617 | 0 | – | |
| PANTHER | 354 | 970 | 617 | 0 | – | |
| Gene3D | 370 | 619 | 250 | 1.50E-59 | ||
| SMART | 482 | 506 | 25 | 62 | ||
| Pfam | 532 | 591 | 60 | 6.60E-08 | ||
| SMART | 578 | 601 | 24 | 66 | ||
| Gene3D | 634 | 704 | 71 | 3.60E-04 | ||
| TMHMM | 642 | 664 | 23 | – | – | |
| Phobius | 644 | 665 | 22 | – | – | |
| Phobius | 666 | 986 | 321 | – | – | |
| SUPERFAMILY | 689 | 970 | 282 | 2.02E-71 | ||
| ProSiteProfiles | 695 | 971 | 277 | 35.99 | ||
| SMART | 695 | 970 | 276 | 6.20E-26 | ||
| Pfam | 696 | 898 | 203 | 9.50E-41 | ||
| Gene3D | 705 | 771 | 67 | 9.80E-21 | – | |
| Gene3D | 772 | 975 | 204 | 9.40E-41 | – | |
| ProSitePatterns | 816 | 828 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v3375780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3375780.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.