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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3724460 |
| Transcript ID | Lj3g3v3724460.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] gi|356542427|ref|XP_003539668.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| PANTHER | 4 | 128 | 125 | 0 | – | |
| PANTHER | 4 | 128 | 125 | 0 | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 22 | 7 | – | – | |
| Phobius | 23 | 648 | 626 | – | – | |
| Pfam | 31 | 77 | 47 | 1.60E-04 | ||
| Gene3D | 36 | 236 | 201 | 5.90E-42 | ||
| Pfam | 83 | 141 | 59 | 2.20E-07 | ||
| SUPERFAMILY | 86 | 408 | 323 | 7.46E-61 | – | |
| SMART | 105 | 124 | 20 | 330 | ||
| SMART | 129 | 153 | 25 | 9.4 | ||
| PANTHER | 164 | 991 | 828 | 0 | – | |
| PANTHER | 164 | 991 | 828 | 0 | – | |
| SMART | 201 | 225 | 25 | 73 | ||
| Gene3D | 240 | 387 | 148 | 1.80E-34 | ||
| SMART | 298 | 322 | 25 | 81 | ||
| SUPERFAMILY | 315 | 621 | 307 | 6.29E-52 | ||
| SMART | 346 | 370 | 25 | 54 | ||
| Gene3D | 388 | 622 | 235 | 1.70E-57 | ||
| SMART | 442 | 466 | 25 | 8.6 | ||
| Pfam | 537 | 558 | 22 | 0.65 | ||
| SMART | 559 | 582 | 24 | 100 | ||
| TMHMM | 646 | 668 | 23 | – | – | |
| Phobius | 649 | 669 | 21 | – | – | |
| Phobius | 670 | 1030 | 361 | – | – | |
| SMART | 711 | 995 | 285 | 8.20E-27 | ||
| ProSiteProfiles | 711 | 1001 | 291 | 36.457 | ||
| SUPERFAMILY | 714 | 991 | 278 | 8.90E-69 | ||
| Gene3D | 714 | 776 | 63 | 6.60E-18 | – | |
| Pfam | 714 | 987 | 274 | 3.10E-44 | ||
| ProSitePatterns | 717 | 740 | 24 | – | ||
| Gene3D | 777 | 989 | 213 | 5.20E-41 | – | |
| ProSitePatterns | 841 | 853 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v3724460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3724460.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.