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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3752260 |
| Transcript ID | Lj3g3v3752260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | receptor-like protein kinase HSL1-like [Glycine max] gi|359807055|ref|NP_001241340.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 1 | 18 | 18 | – | – | |
| Phobius | 4 | 14 | 11 | – | – | |
| PANTHER | 6 | 945 | 940 | 0 | – | |
| PANTHER | 6 | 945 | 940 | 0 | – | |
| Phobius | 15 | 18 | 4 | – | – | |
| Phobius | 19 | 610 | 592 | – | – | |
| Gene3D | 29 | 239 | 211 | 2.40E-49 | ||
| Pfam | 29 | 65 | 37 | 7.30E-10 | ||
| SUPERFAMILY | 55 | 304 | 250 | 7.14E-49 | ||
| SMART | 93 | 117 | 25 | 120 | ||
| ProSiteProfiles | 95 | 117 | 23 | 5.14 | ||
| ProSiteProfiles | 119 | 141 | 23 | 7.466 | ||
| SMART | 140 | 164 | 25 | 49 | ||
| ProSiteProfiles | 142 | 164 | 23 | 5.286 | ||
| Pfam | 191 | 250 | 60 | 2.70E-07 | ||
| SMART | 213 | 237 | 25 | 200 | ||
| ProSiteProfiles | 215 | 238 | 24 | 5.948 | ||
| ProSiteProfiles | 239 | 262 | 24 | 5.109 | ||
| Gene3D | 240 | 412 | 173 | 3.50E-49 | ||
| SUPERFAMILY | 243 | 567 | 325 | 7.14E-62 | – | |
| SMART | 261 | 285 | 25 | 34 | ||
| ProSiteProfiles | 263 | 285 | 23 | 4.863 | ||
| Gene3D | 413 | 569 | 157 | 2.80E-49 | ||
| SMART | 453 | 476 | 24 | 20 | ||
| Pfam | 455 | 512 | 58 | 1.30E-06 | ||
| ProSiteProfiles | 455 | 477 | 23 | 7.211 | ||
| SMART | 477 | 501 | 25 | 28 | ||
| ProSiteProfiles | 479 | 501 | 23 | 5.379 | ||
| ProSiteProfiles | 503 | 525 | 23 | 5.533 | ||
| SMART | 525 | 549 | 25 | 76 | ||
| ProSiteProfiles | 527 | 550 | 24 | 6.488 | ||
| Phobius | 611 | 635 | 25 | – | – | |
| TMHMM | 615 | 637 | 23 | – | – | |
| Phobius | 636 | 970 | 335 | – | – | |
| SUPERFAMILY | 673 | 945 | 273 | 1.48E-76 | ||
| SMART | 676 | 952 | 277 | 2.40E-42 | ||
| ProSiteProfiles | 676 | 952 | 277 | 40.994 | ||
| Gene3D | 676 | 756 | 81 | 6.50E-21 | – | |
| Pfam | 679 | 943 | 265 | 1.90E-49 | ||
| ProSitePatterns | 682 | 705 | 24 | – | ||
| CDD | 682 | 945 | 264 | 3.43E-91 | – | |
| Gene3D | 757 | 947 | 191 | 1.10E-45 | – | |
| ProSitePatterns | 798 | 810 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v3752260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3752260.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.