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Lj5g3v2179770.1

Overview

Field Value
Gene ID Lj5g3v2179770
Transcript ID Lj5g3v2179770.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356574230|ref|XP_003555253.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 26 26
SignalP 1 18 18
SignalP 1 25 25
PANTHER 1 183 183 0
PANTHER 1 183 183 0
Phobius 1 2 2
SignalP 1 23 23
Phobius 3 14 12
Phobius 15 26 12
Pfam 25 63 39 1.20E-13
Gene3D 26 258 233 5.60E-62
SUPERFAMILY 26 278 253 1.59E-50
Phobius 27 322 296
SMART 89 113 25 41
SMART 137 161 25 52
SMART 186 210 25 6.1
PANTHER 232 572 341 0
PANTHER 232 572 341 0
MobiDBLite 283 314 32
Phobius 323 346 24
TMHMM 324 346 23
Phobius 347 713 367
ProSiteProfiles 408 708 301 31.142
SUPERFAMILY 413 705 293 1.48E-59
SMART 413 709 297 1.00E-12
Gene3D 414 471 58 2.00E-14
CDD 414 708 295 2.85E-87
Pfam 414 703 290 2.70E-33
Gene3D 472 703 232 1.10E-35
TMHMM 487 509 23
ProSitePatterns 532 544 13
PANTHER 595 713 119 0
PANTHER 595 713 119 0

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj5g3v2179770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2179770.1, powered by CORGI.

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