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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1416970 |
| Transcript ID | Lj6g3v1416970.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356558217|ref|XP_003547404.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| Phobius | 9 | 19 | 11 | – | – | |
| PANTHER | 10 | 118 | 109 | 0 | – | |
| PANTHER | 10 | 118 | 109 | 0 | – | |
| Phobius | 20 | 23 | 4 | – | – | |
| Phobius | 24 | 879 | 856 | – | – | |
| Gene3D | 30 | 245 | 216 | 1.20E-59 | ||
| Pfam | 31 | 66 | 36 | 1.20E-09 | ||
| SUPERFAMILY | 34 | 378 | 345 | 2.48E-64 | ||
| ProSiteProfiles | 97 | 119 | 23 | 6.341 | ||
| SMART | 119 | 143 | 25 | 11 | ||
| ProSiteProfiles | 121 | 144 | 24 | 5.948 | ||
| SMART | 191 | 215 | 25 | 69 | ||
| ProSiteProfiles | 193 | 215 | 23 | 4.724 | ||
| PANTHER | 226 | 281 | 56 | 0 | – | |
| PANTHER | 226 | 281 | 56 | 0 | – | |
| SMART | 239 | 262 | 24 | 65 | ||
| Pfam | 240 | 300 | 61 | 4.80E-09 | ||
| ProSiteProfiles | 241 | 264 | 24 | 6.765 | ||
| Gene3D | 246 | 343 | 98 | 2.40E-21 | ||
| SMART | 263 | 286 | 24 | 9.5 | ||
| ProSiteProfiles | 265 | 286 | 22 | 5.802 | ||
| SMART | 287 | 310 | 24 | 140 | ||
| ProSiteProfiles | 289 | 312 | 24 | 6.072 | ||
| SMART | 311 | 335 | 25 | 6.2 | ||
| ProSiteProfiles | 313 | 335 | 23 | 5.24 | ||
| SUPERFAMILY | 333 | 660 | 328 | 1.59E-60 | ||
| PANTHER | 338 | 384 | 47 | 0 | – | |
| PANTHER | 338 | 384 | 47 | 0 | – | |
| ProSiteProfiles | 338 | 360 | 23 | 4.901 | ||
| Gene3D | 344 | 583 | 240 | 9.30E-65 | ||
| ProSiteProfiles | 362 | 383 | 22 | 6.072 | ||
| PRINTS | 363 | 376 | 14 | 1.20E-05 | – | |
| SMART | 384 | 408 | 25 | 280 | ||
| ProSiteProfiles | 386 | 408 | 23 | 5.032 | ||
| SMART | 432 | 456 | 25 | 63 | ||
| PANTHER | 433 | 528 | 96 | 0 | – | |
| PANTHER | 433 | 528 | 96 | 0 | – | |
| ProSiteProfiles | 434 | 456 | 23 | 5.34 | ||
| SMART | 480 | 504 | 25 | 120 | ||
| Pfam | 506 | 565 | 60 | 4.80E-08 | ||
| ProSiteProfiles | 506 | 528 | 23 | 5.394 | ||
| SMART | 528 | 552 | 25 | 56 | ||
| ProSiteProfiles | 530 | 553 | 24 | 4.824 | ||
| ProSiteProfiles | 554 | 576 | 23 | 5.679 | ||
| SUPERFAMILY | 580 | 849 | 270 | 6.12E-50 | ||
| Gene3D | 584 | 743 | 160 | 6.70E-42 | ||
| PANTHER | 590 | 1243 | 654 | 0 | – | |
| PANTHER | 590 | 1243 | 654 | 0 | – | |
| ProSiteProfiles | 601 | 623 | 23 | 4.57 | ||
| ProSiteProfiles | 625 | 647 | 23 | 5.887 | ||
| SMART | 671 | 695 | 25 | 8.1 | ||
| ProSiteProfiles | 673 | 696 | 24 | 4.878 | ||
| ProSiteProfiles | 697 | 719 | 23 | 4.94 | ||
| SMART | 719 | 743 | 25 | 66 | ||
| ProSiteProfiles | 721 | 743 | 23 | 4.609 | ||
| Gene3D | 751 | 849 | 99 | 2.70E-21 | ||
| ProSiteProfiles | 752 | 774 | 23 | 4.84 | ||
| ProSiteProfiles | 776 | 799 | 24 | 6.857 | ||
| SMART | 799 | 822 | 24 | 55 | ||
| PRINTS | 799 | 812 | 14 | 1.20E-05 | – | |
| ProSiteProfiles | 801 | 822 | 22 | 7.273 | ||
| SMART | 825 | 856 | 32 | 170 | ||
| Gene3D | 875 | 960 | 86 | 6.10E-04 | ||
| Phobius | 880 | 904 | 25 | – | – | |
| TMHMM | 882 | 904 | 23 | – | – | |
| Phobius | 905 | 1264 | 360 | – | – | |
| SUPERFAMILY | 938 | 1243 | 306 | 8.34E-72 | ||
| ProSiteProfiles | 958 | 1248 | 291 | 37.616 | ||
| SMART | 958 | 1248 | 291 | 5.50E-28 | ||
| Gene3D | 961 | 1039 | 79 | 7.40E-19 | – | |
| Pfam | 963 | 1239 | 277 | 2.90E-42 | ||
| ProSitePatterns | 964 | 987 | 24 | – | ||
| Gene3D | 1040 | 1250 | 211 | 3.20E-41 | – | |
| ProSitePatterns | 1088 | 1100 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1416970.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1416970.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.