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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2006600 |
| Transcript ID | Lj6g3v2006600.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum] gi|502078099|ref|XP_004485839.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 4 | 307 | 304 | 0 | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| PANTHER | 4 | 307 | 304 | 0 | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Phobius | 21 | 625 | 605 | – | – | |
| Gene3D | 23 | 250 | 228 | 7.30E-52 | ||
| Pfam | 23 | 61 | 39 | 7.80E-11 | ||
| SUPERFAMILY | 46 | 307 | 262 | 3.74E-48 | ||
| SMART | 90 | 114 | 25 | 30 | ||
| SMART | 138 | 161 | 24 | 53 | ||
| Pfam | 139 | 198 | 60 | 3.60E-08 | ||
| SMART | 162 | 185 | 24 | 230 | ||
| SMART | 211 | 234 | 24 | 250 | ||
| Pfam | 213 | 235 | 23 | 0.82 | ||
| SUPERFAMILY | 217 | 576 | 360 | 4.71E-57 | – | |
| SMART | 235 | 259 | 25 | 85 | ||
| Gene3D | 251 | 431 | 181 | 1.30E-35 | ||
| SMART | 283 | 307 | 25 | 110 | ||
| PANTHER | 345 | 965 | 621 | 0 | – | |
| PANTHER | 345 | 965 | 621 | 0 | – | |
| Gene3D | 432 | 591 | 160 | 4.30E-45 | ||
| SMART | 498 | 521 | 24 | 53 | ||
| SMART | 522 | 546 | 25 | 34 | ||
| TMHMM | 626 | 648 | 23 | – | – | |
| Phobius | 626 | 648 | 23 | – | – | |
| Phobius | 649 | 998 | 350 | – | – | |
| SUPERFAMILY | 678 | 965 | 288 | 3.10E-70 | ||
| Gene3D | 679 | 779 | 101 | 1.20E-20 | – | |
| ProSiteProfiles | 684 | 969 | 286 | 34.011 | ||
| SMART | 684 | 987 | 304 | 3.40E-28 | ||
| Pfam | 686 | 906 | 221 | 9.00E-40 | ||
| ProSitePatterns | 690 | 713 | 24 | – | ||
| Gene3D | 780 | 976 | 197 | 3.30E-39 | – | |
| ProSitePatterns | 817 | 829 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v2006600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2006600.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.