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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2045730 |
| Transcript ID | Lj6g3v2045730.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | – | – | |
| PANTHER | 15 | 24 | 10 | 0 | – | |
| PANTHER | 15 | 24 | 10 | 0 | – | |
| MobiDBLite | 436 | 466 | 31 | – | – | |
| PANTHER | 484 | 671 | 188 | 0 | – | |
| PANTHER | 484 | 671 | 188 | 0 | – | |
| SUPERFAMILY | 486 | 554 | 69 | 2.18E-43 | ||
| SMART | 497 | 801 | 305 | 1.40E-27 | ||
| Gene3D | 497 | 547 | 51 | 3.50E-23 | ||
| Pfam | 522 | 899 | 378 | 6.10E-67 | ||
| ProSiteProfiles | 574 | 784 | 211 | 12.477 | ||
| Gene3D | 604 | 669 | 66 | 3.50E-23 | ||
| SUPERFAMILY | 609 | 671 | 63 | 2.18E-43 | ||
| CDD | 612 | 766 | 155 | 2.91E-06 | – | |
| MobiDBLite | 679 | 712 | 34 | – | – | |
| Gene3D | 710 | 781 | 72 | 3.50E-23 | ||
| PANTHER | 721 | 901 | 181 | 0 | – | |
| SUPERFAMILY | 721 | 822 | 102 | 2.18E-43 | ||
| PANTHER | 721 | 901 | 181 | 0 | – | |
| SUPERFAMILY | 830 | 910 | 81 | 9.79E-56 | ||
| SUPERFAMILY | 935 | 983 | 49 | 4.86E-11 | – | |
| Gene3D | 936 | 995 | 60 | 1.20E-09 | ||
| Pfam | 938 | 974 | 37 | 2.60E-05 | ||
| SMART | 938 | 976 | 39 | 1.70E-04 | ||
| ProSiteProfiles | 938 | 974 | 37 | 10.453 | ||
| CDD | 938 | 982 | 45 | 5.91E-08 | – | |
| PANTHER | 953 | 978 | 26 | 0 | – | |
| PANTHER | 953 | 978 | 26 | 0 | – | |
| ProSitePatterns | 953 | 962 | 10 | – | ||
| MobiDBLite | 998 | 1020 | 23 | – | – | |
| PANTHER | 1016 | 1038 | 23 | 0 | – | |
| PANTHER | 1016 | 1038 | 23 | 0 | – | |
| SUPERFAMILY | 1017 | 1041 | 25 | 9.79E-56 | ||
| ProSiteProfiles | 1086 | 1245 | 160 | 15.2 | ||
| Gene3D | 1089 | 1224 | 136 | 8.70E-16 | ||
| PANTHER | 1093 | 1250 | 158 | 0 | – | |
| Pfam | 1093 | 1192 | 100 | 4.30E-16 | ||
| PANTHER | 1093 | 1250 | 158 | 0 | – | |
| CDD | 1095 | 1200 | 106 | 8.93E-23 | – | |
| SUPERFAMILY | 1096 | 1249 | 154 | 9.79E-56 | ||
| SMART | 1109 | 1192 | 84 | 9.60E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj6g3v2045730.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2045730.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.