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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2045730 |
| Transcript ID | Lj6g3v2045730.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | – | – | |
| PANTHER | 247 | 256 | 10 | 0 | – | |
| PANTHER | 247 | 256 | 10 | 0 | – | |
| MobiDBLite | 477 | 507 | 31 | – | – | |
| PANTHER | 525 | 712 | 188 | 0 | – | |
| PANTHER | 525 | 712 | 188 | 0 | – | |
| SUPERFAMILY | 527 | 595 | 69 | 2.30E-43 | ||
| SMART | 538 | 842 | 305 | 1.40E-27 | ||
| Gene3D | 538 | 588 | 51 | 3.70E-23 | ||
| Pfam | 563 | 940 | 378 | 6.50E-67 | ||
| ProSiteProfiles | 615 | 825 | 211 | 12.477 | ||
| Gene3D | 645 | 710 | 66 | 3.70E-23 | ||
| SUPERFAMILY | 650 | 712 | 63 | 2.30E-43 | ||
| CDD | 653 | 807 | 155 | 3.02E-06 | – | |
| MobiDBLite | 720 | 753 | 34 | – | – | |
| Gene3D | 751 | 822 | 72 | 3.70E-23 | ||
| PANTHER | 762 | 942 | 181 | 0 | – | |
| SUPERFAMILY | 762 | 863 | 102 | 2.30E-43 | ||
| PANTHER | 762 | 942 | 181 | 0 | – | |
| SUPERFAMILY | 871 | 951 | 81 | 1.04E-55 | ||
| SUPERFAMILY | 976 | 1024 | 49 | 4.86E-11 | – | |
| Gene3D | 977 | 1036 | 60 | 1.30E-09 | ||
| Pfam | 979 | 1015 | 37 | 2.70E-05 | ||
| ProSiteProfiles | 979 | 1015 | 37 | 10.453 | ||
| CDD | 979 | 1023 | 45 | 6.14E-08 | – | |
| SMART | 979 | 1017 | 39 | 1.70E-04 | ||
| PANTHER | 994 | 1019 | 26 | 0 | – | |
| ProSitePatterns | 994 | 1003 | 10 | – | ||
| PANTHER | 994 | 1019 | 26 | 0 | – | |
| MobiDBLite | 1039 | 1061 | 23 | – | – | |
| PANTHER | 1057 | 1079 | 23 | 0 | – | |
| PANTHER | 1057 | 1079 | 23 | 0 | – | |
| SUPERFAMILY | 1058 | 1082 | 25 | 1.04E-55 | ||
| ProSiteProfiles | 1127 | 1286 | 160 | 15.2 | ||
| Gene3D | 1130 | 1265 | 136 | 9.30E-16 | ||
| PANTHER | 1134 | 1291 | 158 | 0 | – | |
| PANTHER | 1134 | 1291 | 158 | 0 | – | |
| Pfam | 1134 | 1233 | 100 | 4.50E-16 | ||
| CDD | 1136 | 1241 | 106 | 9.37E-23 | – | |
| SUPERFAMILY | 1137 | 1290 | 154 | 1.04E-55 | ||
| SMART | 1150 | 1233 | 84 | 9.60E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj6g3v2045730.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2045730.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.