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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0097100 |
| Transcript ID | LotjaGi1g1v0097100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT1G66150.1 transmembrane kinase 1; Swiss-Prot: sp|P43298|TMK1_ARATH Receptor protein kinase TMK1; TrEMBL-Plants: tr|A0A1J7HRR5|A0A1J7HRR5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0097100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:14717096..14721753) extracted from Lotus japonicus Gifu genome v1.2.
ATCTGATTTAAGGTACAAGAGCAAGCACCAAAATTTATAGATGACAAGGTGGTCCATATGAGTATTACACCCATTCATGA CAGCCCATCAGCCCGGGCTTTCAGATACATGGGCCCCACCTGCATGTGCGTTTCTCTTCTCTTCTTACACTGCATCACCA CCTTCCCCTCACTCCCTTTCTCGTTTCTCTGTTCCAGACAATCGAACAAACAACACCACCAAAACCAACAACAACAACAA CAACAACAGCAACAACGTTTTTGTCGACAAAAATAGCAAGAAAAAATGAAGCTGAAGCTGAAGAACAACACGATGCTCTT CGTTTTCCTATCTGGGTTCTTCTCCCTCATCGTTTTCACAACCTCTCAAGACGATGCTTCAGTAATGCAAGCTCTCAAGA AGAATCTCAACCCACCGGAATCTTTTGGCTGGTCCGATGCCGACCCTTGCAAGTGGAAGTACGTTGCCTGCTCCGCCGAC AAACGGGTCACCCGGATCCAAATCGGCCGCCAGAACCTCCACGGCACGCTCCCGGAAACCCTCCAAAGCCTCTCGGAGTT GCAGGTTCTGGAGCTTCAAGTCAACAACATCACCGGTCCGCTTCCGAATCTCAACGGGTTGAGCTCACTGCAAGAGCTTC TCATCAGTAGCAACGGCTTCACCGCCATCCCTGCTGATTTCTTCGCCGGCATGACGCAGCTCTCGTCGGTTGGAATCGAT GATAACCCGTTTGAGCCGTGGGAGATTCCTCAGAGTTTGACAAACGCTTCTGCGCTTCAGAATTTCTCTGCGAACTCGGC GAATATTAAGGGTAAGGTGCCTGATTTCTTTGGCTCTGATGTGTTTCCTGGCTTGACCCATTTGCATTTAGCCTTCAATA GTCTTGAGGGTGGGTTGCCCGAGAGTTTTTCTGGGTCGCAGATTGAGTCTCTGTGGTTGAATGGGCAGAAGAGTGAGGGG AAGCTTAGTGGGTCACTTGGTGTTTTGCAGAATATGACTTCTTTGAAAGAGGTTTGGTTGCAGAGCAATGCTTTTACTGG TCCTTTGCCGGATTTTTCAGGGTTGAAAAGTTTGGAGGTTTTGGACTTGAGGGATAACTCCCTCACTGGTCCTGTTCCAG GTTCATTGATGAGCCTCAAATCGCTCAAGGGTGTGAATTTGACTAATAACTTCTTTCAGGGTCCAATGCCTGTGTTTGGT GATGGGGTTGGGGTGGATAATATTAAGGATTCCAATAGCTTTTGTTTGCCCAGTCCTGGTGATTGTGATCCCAGGGTGCA GGTTCTTCTTTCTGCTGTTGAGCTTATGGGTTATCCTAAGAGGTTTGCTGAGAGTTGGAAGGGGAATGATCCTTGTGTTG ATTGGGTTGGGATTTCTTGTAGTGATGGGAATATTACTGTTGTCAATTTTCAGAAGATGGGTCTTACTGGTATGATATCC CCAGAGTTTGCTAAACTCAAATTACTGCAAAGACTTGTGCTTGCTGATAATAATCTCACTGGTCCAATTCCAGAGGAGCT TACTACTTTGCCTGTGCTTACTCAGTTGAATGTTGCAAACAATCAGCTCTATGGGAAAAAACCGAGTTTTAGGAGCGGTA TAATTGTCACGACAAGTGGGAATAATGATTTGGGGAAGGATAAAAGCACTCAATCCCCTCAGGGTCCACTGTCTCCAACA GTTCCTGATACAAAGGGAGACACAAAGGGAGAAACTGATGGGAATTCTGGAAATAGTGGCAAAAAGTCTTCTTCCCATGT AGGAGTAATTGTGTTTGCTGTGATTGGGGCTGTATTAGCGTTTTGTTTGATTGGTTTCTTGGTTTTCTGCTTGATTAGGA TGAAAAAGAAAAAGTTAAGCAGGGTCCAAAGCCCAAATACACTAGTTGTTCACCCTCGGCATTCTGGATCAGATAATGAC AATGTGAAGATAACAGTTGCAGGTTCAAGTGTAAGTGTTGGTGGTGTTAGTGACACCCACACCATGCCTGGCAGCGAGGC TGGAGATATTCAAATGGTTGAAGCAGGAAACATGGTCATTTCTATACAAGTCCTGAGGAATGTTACTAACAATTTTAGTG AGAAAAATATATTGGGACGAGGAGGCTTCGGAACAGTTTACAAAGGTGAACTCCATGATGGCACAAGAATTGCAGTGAAA AGAATGGAGTCTGGGGTAATAGCTGGGAAGGGTGAAGTAGAGTTTAAGTCTGAAATTGCTGTTTTGACAAAGGTCCGACA CCGGCACCTTGTTGCTCTTCTTGGGTACTGCTTGGATGGGAATGAGAAGCTTCTGGTGTATGAGTACATGCCTCAGGGAC CACTAAGTAGCCATCTTTTTAACTGGTCAGAGGAAGGATTGGAACCATTGGAGTGGAATAGGAGATTGATCATTGCCTTA GATGTGGCAAGGGGTGTTGAGTACCTCCATGGCTTAGCCCATCAAAGCTTTATACACAGAGACTTAAAACCGTCAAACAT TCTCCTTGGAGATGATATGAGAGCAAAGGTTGCGGATTTTGGTCTTGTGCGACTTGCACCAGAAGGAAAAGCTTCTTTTG AAACTAGACTTGCAGGAACTTTTGGTTATTTGGCACCGGAATATGCAGGTATTTAAAATTTTAACTTCATCTCACTAGGT CTTTGTTAGCTATACCGTTTTTTAAGTACTATTTCCCAAATGAACAAGTAGAGAAGTCAAACCATGATCAAGACATTGGC TTAGTTTTATGGTTTGAATGTTAGCTGCATAAGTAAAAAAAAGTTGGGTAAAACCCTTAATTACAATTTCATCATGTTAG TCACTAGGAAGTTAGGAATGTAACTTGTGCAACCAAGTTATTTGTGATCAATTCATAAAAATGACTGAGGGTATTCATTT CACTTCTGTGGTATTCCTTGTTGAACTGGTTTTCAAAATGTAAACTTCCCCTTTGATTGGGCTTGTCTGTAGATGGATTG ACAGGGTATGTGTTATCTGATTTTTTTGCTTGGTGGTATAAAAATTCTGAATGCTTGTATTTATTCTTTCTTGGATGTTC TATGATTTGTGGAAAAACATCTCTAACACTGCCATTTAAATGGCTATCTTATTACAGTTACTGGCCGTGTGACAACTAAA GTTGATGTGTTTAGCTTTGGGGTGATATTGATGGAGTTGTTAACCGGTAGAAAAGCGCTTGATGAAACCCAACCTGAGGA TAGCATGCACCTGGTAACATGGTTCCGCAGAATGTACATAGATAAGGACTCGTTTCGCAAGGCCATTGACCCCTCAATTG AGATCAATGAGGAAACACTTGCTAGTGTTCACACCGTGGCGGAGTTAGCTGGCCACTGCTGTGCGAGGGAGCCATATCAA AGGCCTGACATGGGCCATGCTGTTAACGTGCTTTCTTCTCTTGTAGAACTATGGAAACCATCTGATCAGAATTCTGAAGA TATGTACGGTATTGACCTTGACATGTCCTTACCACAAGCACTTAAGAAGTGGCAGGCTTATGAAGGTGGGAGTCACATGG AATCATCTTCCTCTTCACTTCTTCCCAGCTTGGATAACACGCAGACAAGTATACCGACACGCCCGTATGGATTTGCTGAT TCTTTCACATCAGCTGATGGTAGATGATCATGCTTGGTTGTAAATAATTGTAAGATGGTTCTTGTGTGTGTGTGTGTGTG TATGTGCATTCTCCATGTATCTTGCTGTCTTTTCGGTGTGAACTTGTTTATCATTTTTCATGGTGTAGTCCTTTTCCATG ATTAATCTTATACTCTCTTTAGCACTAGTTCAGGAGTTGTGATGACAAACTGAGAAGCGACTCTCAGCAGAGGATTTGAT TTTCATCTGACATTCATGTTTTTCCCCTTTCAGCTAGTTTTGAGGTGTGTAAATCAAATGTGTTTCTTGCACTTCAGCTT TGTAGCTTTAGGTTCTAGTTTGATCAATTCATTTCATTTATCATTACACTCTATTGAGTTGCAAGTTGTAACTTGTAATA CATGTTCTGGTGTTTCTTTTGTTACCACCCGAAAACTCTCTCTGCACCACCCACAAGCTTCCGGAAATTAATTTTCGGAT GACAATCATTTCCGGAAATTAATTTATGGAAGCTATTTTTGTGGTGCAGAGAGTTTCCGGGCGGTACTAAAAGAAACCGC CTACATGCATGTAAATGACAAAAGACACATGAGGGTCAACACACAACAACTGTGAAATGGATGAGCAAGTTGCAACTAGT AATATCAACCAGTTTTGGATGAGATTGGATTTGTTTGTAATATCAACCAGTTTTGGATGAGCATGGATTTGTGAAATGGA CAAAATAGACAGGTAAGGAAGTAGTTGAAGAAGGAATCAAATATTATTTGTTGCTGCCTGCCTGTTGTGAAAAGCGACCC TACGAAAATTGCAAGCGCAAGTTAAGCCAGAAGATGTGTTACCCTTTCCAACTGGCTCCCAATACTCACTTTATTCTTAT CTTTTTAACATTATAAAAAGAGGAAAGCATCAAGAAATTGAAGATCTTTTTGTAGCCTTTGAAGTTAATTAAAGGTTAAC TCCTGAAAATATTATACTGAGAAGTATGACCTGAGCATTAATACTAAGGAGTATTAAATATTTTTTTTAGTTTGCCAGTT TTTTTTTTTAAAGAATAG
CDS sequence (LotjaGi1g1v0097100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTGAAGCTGAAGAACAACACGATGCTCTTCGTTTTCCTATCTGGGTTCTTCTCCCTCATCGTTTTCACAACCTC TCAAGACGATGCTTCAGTAATGCAAGCTCTCAAGAAGAATCTCAACCCACCGGAATCTTTTGGCTGGTCCGATGCCGACC CTTGCAAGTGGAAGTACGTTGCCTGCTCCGCCGACAAACGGGTCACCCGGATCCAAATCGGCCGCCAGAACCTCCACGGC ACGCTCCCGGAAACCCTCCAAAGCCTCTCGGAGTTGCAGGTTCTGGAGCTTCAAGTCAACAACATCACCGGTCCGCTTCC GAATCTCAACGGGTTGAGCTCACTGCAAGAGCTTCTCATCAGTAGCAACGGCTTCACCGCCATCCCTGCTGATTTCTTCG CCGGCATGACGCAGCTCTCGTCGGTTGGAATCGATGATAACCCGTTTGAGCCGTGGGAGATTCCTCAGAGTTTGACAAAC GCTTCTGCGCTTCAGAATTTCTCTGCGAACTCGGCGAATATTAAGGGTAAGGTGCCTGATTTCTTTGGCTCTGATGTGTT TCCTGGCTTGACCCATTTGCATTTAGCCTTCAATAGTCTTGAGGGTGGGTTGCCCGAGAGTTTTTCTGGGTCGCAGATTG AGTCTCTGTGGTTGAATGGGCAGAAGAGTGAGGGGAAGCTTAGTGGGTCACTTGGTGTTTTGCAGAATATGACTTCTTTG AAAGAGGTTTGGTTGCAGAGCAATGCTTTTACTGGTCCTTTGCCGGATTTTTCAGGGTTGAAAAGTTTGGAGGTTTTGGA CTTGAGGGATAACTCCCTCACTGGTCCTGTTCCAGGTTCATTGATGAGCCTCAAATCGCTCAAGGGTGTGAATTTGACTA ATAACTTCTTTCAGGGTCCAATGCCTGTGTTTGGTGATGGGGTTGGGGTGGATAATATTAAGGATTCCAATAGCTTTTGT TTGCCCAGTCCTGGTGATTGTGATCCCAGGGTGCAGGTTCTTCTTTCTGCTGTTGAGCTTATGGGTTATCCTAAGAGGTT TGCTGAGAGTTGGAAGGGGAATGATCCTTGTGTTGATTGGGTTGGGATTTCTTGTAGTGATGGGAATATTACTGTTGTCA ATTTTCAGAAGATGGGTCTTACTGGTATGATATCCCCAGAGTTTGCTAAACTCAAATTACTGCAAAGACTTGTGCTTGCT GATAATAATCTCACTGGTCCAATTCCAGAGGAGCTTACTACTTTGCCTGTGCTTACTCAGTTGAATGTTGCAAACAATCA GCTCTATGGGAAAAAACCGAGTTTTAGGAGCGGTATAATTGTCACGACAAGTGGGAATAATGATTTGGGGAAGGATAAAA GCACTCAATCCCCTCAGGGTCCACTGTCTCCAACAGTTCCTGATACAAAGGGAGACACAAAGGGAGAAACTGATGGGAAT TCTGGAAATAGTGGCAAAAAGTCTTCTTCCCATGTAGGAGTAATTGTGTTTGCTGTGATTGGGGCTGTATTAGCGTTTTG TTTGATTGGTTTCTTGGTTTTCTGCTTGATTAGGATGAAAAAGAAAAAGTTAAGCAGGGTCCAAAGCCCAAATACACTAG TTGTTCACCCTCGGCATTCTGGATCAGATAATGACAATGTGAAGATAACAGTTGCAGGTTCAAGTGTAAGTGTTGGTGGT GTTAGTGACACCCACACCATGCCTGGCAGCGAGGCTGGAGATATTCAAATGGTTGAAGCAGGAAACATGGTCATTTCTAT ACAAGTCCTGAGGAATGTTACTAACAATTTTAGTGAGAAAAATATATTGGGACGAGGAGGCTTCGGAACAGTTTACAAAG GTGAACTCCATGATGGCACAAGAATTGCAGTGAAAAGAATGGAGTCTGGGGTAATAGCTGGGAAGGGTGAAGTAGAGTTT AAGTCTGAAATTGCTGTTTTGACAAAGGTCCGACACCGGCACCTTGTTGCTCTTCTTGGGTACTGCTTGGATGGGAATGA GAAGCTTCTGGTGTATGAGTACATGCCTCAGGGACCACTAAGTAGCCATCTTTTTAACTGGTCAGAGGAAGGATTGGAAC CATTGGAGTGGAATAGGAGATTGATCATTGCCTTAGATGTGGCAAGGGGTGTTGAGTACCTCCATGGCTTAGCCCATCAA AGCTTTATACACAGAGACTTAAAACCGTCAAACATTCTCCTTGGAGATGATATGAGAGCAAAGGTTGCGGATTTTGGTCT TGTGCGACTTGCACCAGAAGGAAAAGCTTCTTTTGAAACTAGACTTGCAGGAACTTTTGGTTATTTGGCACCGGAATATG CAGTTACTGGCCGTGTGACAACTAAAGTTGATGTGTTTAGCTTTGGGGTGATATTGATGGAGTTGTTAACCGGTAGAAAA GCGCTTGATGAAACCCAACCTGAGGATAGCATGCACCTGGTAACATGGTTCCGCAGAATGTACATAGATAAGGACTCGTT TCGCAAGGCCATTGACCCCTCAATTGAGATCAATGAGGAAACACTTGCTAGTGTTCACACCGTGGCGGAGTTAGCTGGCC ACTGCTGTGCGAGGGAGCCATATCAAAGGCCTGACATGGGCCATGCTGTTAACGTGCTTTCTTCTCTTGTAGAACTATGG AAACCATCTGATCAGAATTCTGAAGATATGTACGGTATTGACCTTGACATGTCCTTACCACAAGCACTTAAGAAGTGGCA GGCTTATGAAGGTGGGAGTCACATGGAATCATCTTCCTCTTCACTTCTTCCCAGCTTGGATAACACGCAGACAAGTATAC CGACACGCCCGTATGGATTTGCTGATTCTTTCACATCAGCTGATGGTAGATGA
Protein sequence (LotjaGi1g1v0097100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLKLKNNTMLFVFLSGFFSLIVFTTSQDDASVMQALKKNLNPPESFGWSDADPCKWKYVACSADKRVTRIQIGRQNLHG TLPETLQSLSELQVLELQVNNITGPLPNLNGLSSLQELLISSNGFTAIPADFFAGMTQLSSVGIDDNPFEPWEIPQSLTN ASALQNFSANSANIKGKVPDFFGSDVFPGLTHLHLAFNSLEGGLPESFSGSQIESLWLNGQKSEGKLSGSLGVLQNMTSL KEVWLQSNAFTGPLPDFSGLKSLEVLDLRDNSLTGPVPGSLMSLKSLKGVNLTNNFFQGPMPVFGDGVGVDNIKDSNSFC LPSPGDCDPRVQVLLSAVELMGYPKRFAESWKGNDPCVDWVGISCSDGNITVVNFQKMGLTGMISPEFAKLKLLQRLVLA DNNLTGPIPEELTTLPVLTQLNVANNQLYGKKPSFRSGIIVTTSGNNDLGKDKSTQSPQGPLSPTVPDTKGDTKGETDGN SGNSGKKSSSHVGVIVFAVIGAVLAFCLIGFLVFCLIRMKKKKLSRVQSPNTLVVHPRHSGSDNDNVKITVAGSSVSVGG VSDTHTMPGSEAGDIQMVEAGNMVISIQVLRNVTNNFSEKNILGRGGFGTVYKGELHDGTRIAVKRMESGVIAGKGEVEF KSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGPLSSHLFNWSEEGLEPLEWNRRLIIALDVARGVEYLHGLAHQ SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASFETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELLTGRK ALDETQPEDSMHLVTWFRRMYIDKDSFRKAIDPSIEINEETLASVHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW KPSDQNSEDMYGIDLDMSLPQALKKWQAYEGGSHMESSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 10 | 10 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 31 | 31 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 11 | 22 | 12 | - | – | |
| Phobius | 23 | 27 | 5 | - | – | |
| PANTHER | 25 | 920 | 896 | 6.0E-284 | – | |
| PANTHER | 25 | 920 | 896 | 6.0E-284 | – | |
| Gene3D | 27 | 327 | 301 | 1.3E-78 | ||
| Pfam | 28 | 63 | 36 | 7.2E-6 | ||
| Phobius | 28 | 491 | 464 | - | – | |
| SUPERFAMILY | 57 | 433 | 377 | 2.15E-47 | – | |
| SMART | 112 | 135 | 24 | 0.067 | ||
| SMART | 187 | 210 | 24 | 57.0 | ||
| Pfam | 190 | 209 | 20 | 1.7 | ||
| SMART | 260 | 283 | 24 | 59.0 | ||
| Pfam | 262 | 283 | 22 | 1.6 | ||
| Gene3D | 328 | 453 | 126 | 4.7E-29 | ||
| Pfam | 332 | 366 | 35 | 0.0023 | ||
| SMART | 391 | 415 | 25 | 230.0 | ||
| MobiDBLite | 446 | 489 | 44 | - | – | |
| MobiDBLite | 446 | 466 | 21 | - | – | |
| Phobius | 492 | 517 | 26 | - | – | |
| TMHMM | 494 | 516 | 23 | - | – | |
| Phobius | 518 | 950 | 433 | - | – | |
| Gene3D | 560 | 674 | 115 | 2.5E-35 | – | |
| SUPERFAMILY | 575 | 881 | 307 | 9.59E-79 | ||
| ProSiteProfiles | 597 | 877 | 281 | 39.693 | ||
| SMART | 597 | 877 | 281 | 1.6E-44 | ||
| Pfam | 598 | 871 | 274 | 2.1E-45 | ||
| ProSitePatterns | 603 | 635 | 33 | - | ||
| CDD | 603 | 876 | 274 | 2.87729E-93 | – | |
| Gene3D | 675 | 897 | 223 | 2.1E-55 | – | |
| ProSitePatterns | 722 | 734 | 13 | - | ||
| MobiDBLite | 916 | 939 | 24 | - | – | |
| MobiDBLite | 916 | 950 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0097100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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