Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0553600 |
| Transcript ID | LotjaGi1g1v0553600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase family protein; TAIR: AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp|Q9XIF2|MTR4_ARATH DExH-box ATP-dependent RNA helicase DExH9; TrEMBL-Plants: tr|V7AZU7|V7AZU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0553600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108547125..108557959) extracted from Lotus japonicus Gifu genome v1.2.
CTCTTGTCTGGATATTTTCATCCGCCGGCGCCACTGCTTTCCTCTTCTCTGCCCAGAACGCCGTCGTGCGAGTGAGGAGG AGTTTGAGGAAGCCAGGTATATATATATATATATATATATATTCATCACAGTTCAGGCTCAACATTCTGGTTGGTTGGCG GCGGCGCCGTAACCCTATCCCTGTCGCTGCGCCGTAACAACAAGAAGGTATAGATATGGGGTCACTCAAGAGGAAATCAC CAGAAGAACCAACAACACAGTTACAGAGGGGGGAGGAACTGCAATATGACTGTGTACATGACGTCTCCTACCCACACGGT TACATTCATCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACTCACACTGAGCCTGCTAAGAAGTTCCC TTTTACCCTCGACCCCTTTCAGTCCCAAGCTATTACCTGCATCGAAAACGGCGAATCCGTCATGGTAATAACTCTGCATT TTCATTTATTCATATTCATATTCATATCGAATCTCAATAGGATTATGGATGATTTTCTCACTAGCTCACTTCACTCAGGT GTCTGCACACACATCTGCTGGGAAAACTGTTGTCGCTTTATATGCTATTGCCATGTCACTTCGAGACGGACAGCGTGTTA TCTACACTTCTCCTATCAAGGCGCTTAGCAATCAGAAGTACAGAGAGTTCAAGGAAGAGTTCTCTGATGTTGGTTTGATG ACTGGAGATGTCACCATTGACCCCAATGCTTCTTGCTTGGTAGGTGTGCTCCCCAGGGTTTTAACGTTTGCCAGAGCTTA TTTGAGCTTATCTGATAGCATAAGCGCTTGTGCAAGTGTTTAGGAGAGCTTATGCAAACAGCTTATGACCTACCAGAAGC TGTTTTGAGCTTATTTTCTTATGAAAAAAAGCTTATGCTAATATACAACTTATTTTCATTTTTTTTTTTAAAAATAGCTT ATGAATAAGCGCTTATGACCATAAGCGCTTAATTAAGCTGTTTTTCCAAACAGGGCCTAAGTTTAACTGCTGTCGCCCGT TTGTGTCATTGATAAAAGTTGAATTCTTTTTTTTCATTTTCAGGTGATGACCACGGAGATCTGGCGTAGCATGCAATACA AAGGGTCCGAGATCACCAGAGAGGTGGCTTGGATCATTTTTGATGAAGTGCATTACATGCGAGATCGCGAGAGGGGCGTG GTTTGGGAAGAGAGTATTGTTATGTCGCCAAAGAATTCCCGTTTTGTCTTCCTGTCTGCCACGGTCCCTAATGCAAAGGA GTTTGCGGATTGGGTGGCAAAGGTGATTCATTCACTCTTTACTTTATTGCATGGAGTCCATTTTTTAATTGCATAAAGTA AATAGCTGTTGGTCTGATGCTTTTAGATTATTTGCAGGTGCACCAACAGCCGTGTCACATAGTTTATACTGATTACCGAC CTACTCCTCTTCAGCATTATATTTTCCCTTCTGGAGGTGATGGTCTATATTTGGTTGTGGATGAGAAGGGAAAATTTCGT GAAGACAGCTTTCAGAAATCTTTAAATGCTCTTGTTCCTCCGAGTGAGGGTGATAGGAAAAAAGACAATGGCAAATTTCA TAAAGGTTTGATGCTGGGAAAGGTTGGTGAGGAGAGTGACATTTTCAAGATAGTGAAAATGATCATTCAGCGTCAATATG ATCCCGTCATACTGTTCAGCTTTAGCAAAAGGGAGTGTGAATTTCTCGCAATGCAGGTAACAACTTCAAACTGTTGTTCA TTGCTGAAAGTGTTTATTCATTTCATGTTCTTTCCATTCTTTCATGCGTTATGCTATGTCTCTGATGTCTTCTTTGGTTT CTGCAGATGGCAAAAATGGATCTGAATGGGGACGATGAGAAGGACAACATAGAAAAAATATTTTGGAGTGCTATGGATAT GCTTTCAGATGATGATAAGAAGCTTCCTCAGGCAATTTACTTCCTATAACTTTGGTCTTCCCCCCTCCCCTCTTTGGGCA CATTATCATACCGCTTGCTACCAAACTGAACATTTCAATTTGAAGTTATGGTGATTGTAGAAAAAAATTGTAGTCAATGA AAGGTCTCTAGCAAGAGACATTTCTTGCCCTAGGGTCCTCCCAAAACTTGTTTGACTTGCTACTGTCTATATATACAATA ATGTCATTGTAGTTGCATGTTATAATGTTAGTCATTTTTATGGTATTTATCTCTCTTTTTCATCAGTTTTTATTTATTCT TTCAGGTTTCAAACATGCTGCCCTTGTTGAAACGTGGAATAGGAGTCCATCACTCTGGTTTACTTCCAATTCTAAAGGAA GTGATTGAGATCTTATTTCAAGAAGGGCTAATCAAGGTTAGTTGGAAAATCATAAGATACTTTCTACATCTATATATCAA ATATAAGTTGTGAACCTGTAATGCAGCTGGATCCATACCTTCGATAGATTCACAATTTACCAATGTGATCGTAATGTTGA GTCAAATATTACATTATCTGATTATCATCATAATGGTGGTAAAGGAGTTTAATACAGCAATAGTAGGCTAGTTAGCAGCA GTTGCAGCAATCTCTTAGGGGGCATTGCATGCTACTAATGTTATCTTTGCTTTGATTTTGATTTTTATGGGAGAAAATGT TATCATGAAGAAAGGAAAGCAGTTACATACTGGGGAGAATATATATCCTTCTTTATAAGAAACTAAGAAACAAACATCAT CCGGCCATAAAGGCTAATGCATCAAATTTGTCCAATTCTTTGCATTTCAATAGCAATTCCCTTGATAAGACAATGGGTAG AGTGAGCACCAAGTAGAGGCCATGAACAAAATTCTACCCTTGAAAATACAGGAATTCCATCCCAGCCAAATAAACCAGAG AATTTTGACGCACATTTAGGTTCCTGATTCCTGTCAAAATCTTGAAAACTAACTCCCACAGTGAAAGGACGCACCAAGTG GTACAGTACACCAACAAAGCGTGTCATGCGAAATCTTTGTTTCCTTATCTATTATTCATGTTCCAATGAAAATGAAAGAA ACATTAGGAGCCTGCATAAAACTGAAATATTATATGAATGTTTTGTGTATAGAAGAGAGTTGCTCCAAGGAGAAGTCTTT GAATAAGAACTTTGCTCAGTCAATCATCCTTCCAAACTTAATTTAGGAACCATGTATTTGATACAAAGAAGATGTGGTCT AAAGTAAGCATATCCCTGAGAAATAAACTTCCAGGGATTAGAAAGAATTGCTATAATTTCAGGTTTGAGACTAAACCCAT TAGGGTCTGAACAGTGCTCACGGCCAAAATGTAGTAGTCTTATTAAGGGAAATGTCATAGCCTTTTCTGTTACCAAAGAA ATTTCTCCTGGACATCAAATTCTAAAAACCCAATTACCCCTTCATTCTTATTATACCAGCTACAAACCCCCTAATTAATG AGGTGATCCTTCTCTGATTGCCTGACCTCCATCTTCTGAGACACCCTGACTAGAATTTGAACAAAGGAAAGATAGTGAAG TGGCTACAAAACAAACATTTTTAGTACATTAATCAGATAGATACCACTGTTTTAGTTGTGTAAGTAGTTCAGGGATGACA CTCATAGTGGCCGAGTTAGAAGAGGCCACCAGTCCACTACAAAATATTATTGCTTTTAAATTTATAGATAGTACTCAGTG GCTTTCTAGTGTGCTTTTTGGCTTAATCTTTTTGTTCTAAATTTTTTGCCTATTCAGATAACTGTAGTATTTTAGGAACA AATATATTTCCATAACAGCTTCTCAATTAATATTGAAACACTAAACATTCCTTGTTTGATACACCCACAGCAATCAAAGC CTTTTCCCACTAGCTGGGGGTTGGCTAATGGATCAAAGAACATCATGATACACACTCTTTGCTTGATAAAATCATAAACT GTACCAAATATTAAACTATTTCCCTTTAGTGTTTGTTTGCTACAGAGACCTTCAGCATTGGTTTGAACATGCCTGCAAAA ACTGTTGTATTTACAAATGTCCGAAAATTTGATGGGGACAAGTTCAGATGGATTACCAGTGGAGAATATATCCAAATGAG TGGCCGTGCGGGTCGACGAGGTATTGATGAACGCGGAATATGTATCCTCATGGTCGATGAGAAGTTGGAGCCTTCTACTG CTAAAATGATGGTTAAAGGGGCAGCTGATAGTTTAAACAGGTACATTGTTGAGCTAATTTAAAGAATTATGTATTATATA AATACAGCAAGGTAATGGTTAATTCATTTATTTTTCGCAAAATTTCTGTTTTTTGTCAAAACCTCAATGATTGTTCAAGT TTTAGAACCGGAATTATTCTTGGTATTCTTGACTTGGGTATATATCAGCGGCATACACTTTGGTGTTTCTGGTGAATGTT GCACATATGCAGAGGGTTTGGAGCATTTCATCTTTTAGAACTTGGATGTTACTTGAGGGACTGTGTATTCCTACATGGTA TTATTTTCTAATGTTTCTATTGGATCAATAGAGCTTAGAGAGATTTAATCTGAGTTATTGCTTACAGTGATAAAGCATGC TCTAGGAATTTAGTGCTTTTGGTTGGAGCTTAATTCTTGCATCCTTCCGGAGATTTCTTTGGACATGTAGGTTCTCTGGG CTAAGATTAAGCACTTGTCTTCCTCTTGGTATCAAGCTCATGGGTCCCCCCCCCCCCCTTCTTTTTTTAGAGGTTTATGT AGCTTAATTTTTAGAGGTTTACTTTGCACTCATGTTACCTTTTCACTTTTCAATAGTGTTATGTCCTCCCAACCCTTTGT AATCATATTCCCTTTGTCTTGAAGAATTTCTTTTAACATGATAAATAAATAAAGCCTACTCCGTGCATTCTCAAATGAAT ACAGGTAGATTCTCAAACTATTTATTATTGACCTGGGTGGTGTCTTGTAACTTGTCAATTACTGTTTTTCCTACTCTTTT CTAAAGCTACTTGTTCTCCAGCTTGGTAAGTAGTTCTCTCTATTAACAGAGAGAGGTATGCCTAAACATGAAAAATGGAG CTTGTGTCTTGCTCAGACGCTGCACTCTGAGTTTTATTTAGCAAGTAGAGTTTGTATTAGAGTATAATAGTAATAGCTTG TGTAAGAAGCTTGGCTTCTAGTATAAATATAGAGGTTAACTCATAGTTGTAGCTACCTTTCATAATACAATAACAGATTC AGTTATTCTCTCTCTCTCTCTCTCTCTCCCTTCTGGTTTTCTATTAGTTTGTATGTATTACAAACTTCTACAACTACACA TCTAAAACAATGAATCAGAGATGCCTGGACTTCTCGGACAGCCTGTTGTGAATGCCCGTCTTGTGTAGGATTTATCAGAA ACTGTTAAAAACAATACACGTTAACTGCAATGGTTATGTGACTTGTGATATGATAGAGACTGTCAAAAGCTAATACTTTA AAGTTAGCTAAATCGTGGTTGTCTTAGGCTGTTATCTTTTGCTACATTATTATCTTCATCCACCAAAATATATGTCTTCT ATTTTTAATATTGTTGTCTCTAATATGTTTATATTCCTTGCATTTTCAGTGCCTTTCATTTAAGCTACAACATGCTTTTG AATCAAATGCGTTGTGAAGATGGTGATCCTGAGAATTTGCTCCGTAATTCCTTTTATCAGTTTCAAGCTGATCGTGCCAT TCCTGATCATGAGGTTTGTTTAAATTAATTAAGGCTGGAAGCTAGATTTTATATGATATATAGTTTCATGAGGTTATGCT AATCATGTTTCTATTATTTTAAAATTTTACGCCTGTTTCTTTTTCATGTCAGAAACTTCTTTATGTTGTGGGTTTAATTG TGTAAAATATTTCTCATGCCTGTTGAAGTCAAGATAGGTTACTTTGATTCAGATAAAAAATAGATGAAAAATTTCTGTGT AGAGTAAGTTTTAGGGTTTGAAATCACCCCTTCCAAAGGTAAAAACCTTTCACAAACTTAATAATCAAATCCTACCCCTA ACCTAATGAGAGAGCTGTTATTTATAATAAACTAACCTTACTAAAGAAATAAAGATAGGCTAACAACTAACAGATAAAAA TGAACTAAACTCAGGCCCACAAGTCTTAGGCCCAATATTTAGAACCCTAACAGCCTCCTCCATTCTTGAGAATTAGATTT AGTTTTAGTGAAGCAGGCAGTTGTATTTTCCATCCTTCAAGTTTTAAGGACTTTTGTTTAAAGAAGCATACTAGTTGTCA TCAACCGACTCCCCCAAAAGTTTAAAGAAGGTAAAAGAACAAAAAAAGAATGATTTCTTGAAGAATTTTTTATAATATTT GATGTAAATATCTCTTCTTTATTTTCACAATTTTGTTGGGTATTATAAAAATTCTTCAAGAAATCAATATTTGTTTGTTC TTTTGCCTTCAAATAACCCCCAACCCCATATACCCACCTTTAGGGTAAAAGAGCGAGGAGGTGTAACATAAAACGGTTAT CACTCTGTACACGAAGGCATGGTACAGAGGGCATAGGTTCGATTCCTGAGTTAGGGGAAAGCACATAAATAATAATTGTT TTTATATCTAGCATGCTCCCTTACACAAGAGTATTTTGGGCTTAAAGCGTGGATAATGCACAGACTCACCTAACATTGTG CTAAAACTTAACTATTATTATAAGCATGGTGGCAGCTAAGACGAACTTCTAAATCACTTGGTCATAGAAGCTCTAATACA ATGTCATGATCAACTCTTCAAAAAGCAAAGCTGTTAGACATCTATAGTTTTAATTTCTAACATAGGTTTTTATCATAGTC TTGATAAAAACATATGTTTTTTCATAATTTCTTTCCTTGTATAGTGGATATGGAAATTATATCACGAAAAAAGTAATTTC TCTTAATAATTTTGTATATACAGAAACAAATAAAGGCTCTTGAAGAAGAGCGGGAATCAATTGTTATTGAGGAAGAAAAC AGCTTGAAGGATTATTACCATCTGCTGGAGCAGCATAGAAGTTTGAATAAAGAGGTTCGCGACATTGTGTTATCTCCAAG GCACTGTTTACCTTTCTTACAGCCTGGGAGGCTTGTTTCTCTTCAATGCACTTCAAGTGATGACGATCCTCCTATTATTA TTGAGGACCAGTTGACATGGGGGTTGGTCATTAATTTTGAAAGGGTTAAAAGTGTTTCTGAAGGTGAGTTTTCAGTGGTT TATGGTGATTTATATATATTTTTATATAAAATTTTAGTTCGTTTGTTGTAAAATATAAGCATTTTCAGATGATGTAAGTA TTAAACCAGAGGACGCATCTTACAATGTTGATATTCTTACAAGATGTATGGTGAGCAAGGATAAAATTGGGAAAAAATCT GTTAAGATTGTTCCTCTGAAAGAAGTTGGAGAACCTCTAGTGGTTTCAGTTCCAATCTCTCAGGTAAATTCTTTTAAACT GTTAAATGATGTAATATATCTGCAGCCTGTGACCCTGCATTGTATTTTTTTTAAGGTTTTATTTCAACAAAGTATGATAT TTTGTAATCGATATGGTTTAAGTTATGATTGAAAATCAAGAGCCTATAGAGTGAAATAGAAAATTGACAAAATGAGACGG AGATCATAATATGATCAATTACTTGGAATCTAAGAAGCACGATGCCTCTGAACAATGAAATGTCTGGGTGTCAGGCATTG GTGGCCCGACACAACTCTTTCATTTTTTGGCTCAAACACTCCTCAAACGGCTAAGTTGATTCCTCTTCTTGGCTAGACAC CACTAGGAGTCTAGAACAATGATTTCATAAACAAAAATTGTTTTTCTAAAAAGTCAACTTATTTATATATTTTAGATTCT AAAATAATCATTTAAAAAACAAACTTATAAGTTACCCTTTCAAATCTGATAGGTTGTTTAAGAGGTATGAATCTTCTTCT TGTCATAGGACTTCCTTTGTACGGACAAAGTGTGCATTGTGAGGCTCATTATCATAAGAAAATTGTAAAACTTAGCTTGT CTTGACTTTGAGAAGCTGAATATAGATTTGTTATTTTCTTTTTTTAATATATAAATATGTGGTGTCTCGGTATCCTATTT TTTTGATATAAGCTGTAGTCGCGGTGTCCGTGCCGCACTCGGTGCTCTATAGCTTTGAATGAAAACCTCCATGCAAAACA GGATTAGAATGTAATCTTGACTATCCACATAATTAAAGAAACTAGTTTTGAGTATCCATTTATAACTGTATGGTCAGATT AATTGTTCTCATTTATTTTTATGAGAACTGTTCTCACTTGATGTGTTCATATTTATTTTTGTGTCTATATATGTTAGCTG TGCTTTAAATAACTTATGTATTTAAATTCACTAGTTACAATGTGATATCAAAGCCTCTATTCAATCCGTTGTCAAAATGT TGTGCTTGACAAAATTGTTTATTTATGGCTTTTTTAGTTTACTGACGATTTGTAAATTATTTGATGTTTCATTGTTAACA GATTAATACAATTAGCAGTTTGCGGTTATATATACCAAAGGATCTTTTGTCATTGGAAACTCGGCAAAACACGCTGAAAA AAGTGCTGGAAACTCTTTCTAGATTCGGTGAGAAAGGATTGCCACTTCTAGATCCTGAAGAAGACATGAAGGTGCTGTGC TCATCTATTCAATTTCCTTCTTTCTTTTTTCTTTCGTATATGTCTGATTAAATTATCATGTCGATTCTCTTCTTTCTCAG ATTCAAAGCAACTCATACAAAAAAGCATCTCGTAGGATAGAGGCTTTGGAGAGCCTATTTGAAAAGCATGAAATTGCGAA GTCACCACTTATAAAGCAGAAGTTAAAGGTTTTACAGAGGAAGCAAGAACTGACTGCAAGGATAAAGTCCATTAAGAAAA CAATAAGATCTTCTACTGTTTTAGCCTTCAAGGATGAACTTAAGGCAAGAAAGAGGGTTCTTCGCAGGCTAGGGTATTGA AAATTCTGAAGTGCCCTGTTCTTTATCCCCCTCATTTCATTTCTTTCCCTTTTTTGCTGAATGGTCTTGAAGCTTTGACA TTGCTCTTAAGTTCTGTTCAAAGCTGCTTTATACTATCATTTTATACTGCCTAATGCTGAAAGTGATTAAGCGCTTCCTT GAAAATTTATCTCAGTTTTGCTCCCAAATGCAACATAATGTCTTTATTTTTTCTATTTTTGTTATTTATGTGGTCTTCTA TCTACTTTTGTTTAAGAGAACTAATCATGCTCTACATTGTTTTTTCTTGTATTCTATTGATGTCTTTTCTTTAATAATGT TTCTTTTGTCTCCCCTAAAGTAATGCAGTAGAATGCCTACCGCTTCACACTCAATGTTCAAATCAACACATGATTTTTTG CTGATTTGGTTATTTCGTGTGTTTGTTCTTGTTTTCTTTTGCATTAATAGTATTAACTTAAAGAGTCCAATTTAGCCTCA TTTCAAAAAAAAACTCATGTATTTGTGGCAGAACACTCTTATGCAGTGGTTAGAACTTGGAACTGTTCAATATGATCTTA GTATCCTATTGCTTATTACAATCATGTCAATGTCCAAGTTGTGGATATGGCAATTTCTATCAAATAATTTCAGCTACCTA ATGTGATTGTCTTTTTTTATGATGATACTCATGTGAGATCTTCATTTGCAGATATGCTACAAGTGACAATGTGGTGGAAT TGAAAGGGAAGGTTGCTTGTGAAATTAGTAGTGCAGATGAACTGATCTTAACAGAACTAATGTTCAGTGGTGTGTTAAAG GACATAAAGGTTGAGGAAATGGTTTCTCTCCTCTCTTGTTTGGTCTGGCGAGAAAAAATTCATGACGGTGCCAAGCCTCG GGAGGAACTTGATCTGCTTTTTGCACAATTACAAGACACTGCTCGGAGAGTTGCCCAACTTCAGCTTGAATGCAAGGTAA TAATAGAAATCAATTCATCGCATGACTGACATCTAATTGCACATATGAAGAGTTTCAATTTTGATTTCGTGAAAATCTAC CCTTGTTAGTATTCAATTGACAGTGCGACTCCTTGAATATTGGTGATTCAGCCCCACTTACAAGTTACAGCCCTTTTTCA GTTTATCAGTTTGCTAACATGTACATTTTTAGGTTCCTTCACTTAATAGTTGTACAATGCTTAATCAATCTCTCTTTGCT TTGATCTTTTTTTAACGATTGAAAAATAATAAACAGGTGGAAATTGATGTTGAGAGCTTCGTGAAATCGTTTAGGCCTGA TATTATGGAGGCTGTGTATGCGTGGGCGAAAGGTTCGAAGTTTTATGAGATCATGGAAATTACACAGGTCTTTGAAGGCA GCTTGATTAGAGCAATTAGAAGACTTGAGGAAGTTCTTCAGCAGTTAATAGAAGCAGCCAAGTCAATTGGAGAGACTCAA CTTGAGACAAAGTTTGAAGAGGCTGTGTCCAAGATCAAGAGGGATATTGTCTTCGCAGCATCCTTGTATTTGTAACTTCT TCACCTTCCAAGAAACTATGCATTTTACATGGATTTAAGTCCATGAAGGATAATGGACGTGGGACATCATATGGAAGGGG TGTACTGTGCGAGTCATCCGTATCTATCCCCATAAGTTTTGCTCTTAAATAGTTTTTATGTATACTTCTATAGCCTGGAA ACGAGTCCAGGCGAGTTTAATTAGGCAGTGAAGAAATTCAGCTTAAGATTACTAGTGCTTAAGCTCAATGACCCAACATT GGGACATGTATTATGAGTTGGTTTGGACATGGAGTACTCAAATGTTTTAGAAGGTTTAATTGATTCAAATACCAAATTCA AATTATTTTTAAGGCTTAATCCTCAAATTAGTCCC
CDS sequence (LotjaGi1g1v0553600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTCACTCAAGAGGAAATCACCAGAAGAACCAACAACACAGTTACAGAGGGGGGAGGAACTGCAATATGACTGTGT ACATGACGTCTCCTACCCACACGGTTACATTCATCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACTC ACACTGAGCCTGCTAAGAAGTTCCCTTTTACCCTCGACCCCTTTCAGTCCCAAGCTATTACCTGCATCGAAAACGGCGAA TCCGTCATGGTGTCTGCACACACATCTGCTGGGAAAACTGTTGTCGCTTTATATGCTATTGCCATGTCACTTCGAGACGG ACAGCGTGTTATCTACACTTCTCCTATCAAGGCGCTTAGCAATCAGAAGTACAGAGAGTTCAAGGAAGAGTTCTCTGATG TTGGTTTGATGACTGGAGATGTCACCATTGACCCCAATGCTTCTTGCTTGGTGATGACCACGGAGATCTGGCGTAGCATG CAATACAAAGGGTCCGAGATCACCAGAGAGGTGGCTTGGATCATTTTTGATGAAGTGCATTACATGCGAGATCGCGAGAG GGGCGTGGTTTGGGAAGAGAGTATTGTTATGTCGCCAAAGAATTCCCGTTTTGTCTTCCTGTCTGCCACGGTCCCTAATG CAAAGGAGTTTGCGGATTGGGTGGCAAAGGTGCACCAACAGCCGTGTCACATAGTTTATACTGATTACCGACCTACTCCT CTTCAGCATTATATTTTCCCTTCTGGAGGTGATGGTCTATATTTGGTTGTGGATGAGAAGGGAAAATTTCGTGAAGACAG CTTTCAGAAATCTTTAAATGCTCTTGTTCCTCCGAGTGAGGGTGATAGGAAAAAAGACAATGGCAAATTTCATAAAGGTT TGATGCTGGGAAAGGTTGGTGAGGAGAGTGACATTTTCAAGATAGTGAAAATGATCATTCAGCGTCAATATGATCCCGTC ATACTGTTCAGCTTTAGCAAAAGGGAGTGTGAATTTCTCGCAATGCAGATGGCAAAAATGGATCTGAATGGGGACGATGA GAAGGACAACATAGAAAAAATATTTTGGAGTGCTATGGATATGCTTTCAGATGATGATAAGAAGCTTCCTCAGGTTTCAA ACATGCTGCCCTTGTTGAAACGTGGAATAGGAGTCCATCACTCTGGTTTACTTCCAATTCTAAAGGAAGTGATTGAGATC TTATTTCAAGAAGGGCTAATCAAGTGTTTGTTTGCTACAGAGACCTTCAGCATTGGTTTGAACATGCCTGCAAAAACTGT TGTATTTACAAATGTCCGAAAATTTGATGGGGACAAGTTCAGATGGATTACCAGTGGAGAATATATCCAAATGAGTGGCC GTGCGGGTCGACGAGGTATTGATGAACGCGGAATATGTATCCTCATGGTCGATGAGAAGTTGGAGCCTTCTACTGCTAAA ATGATGGTTAAAGGGGCAGCTGATAGTTTAAACAGTGCCTTTCATTTAAGCTACAACATGCTTTTGAATCAAATGCGTTG TGAAGATGGTGATCCTGAGAATTTGCTCCGTAATTCCTTTTATCAGTTTCAAGCTGATCGTGCCATTCCTGATCATGAGA AACAAATAAAGGCTCTTGAAGAAGAGCGGGAATCAATTGTTATTGAGGAAGAAAACAGCTTGAAGGATTATTACCATCTG CTGGAGCAGCATAGAAGTTTGAATAAAGAGGTTCGCGACATTGTGTTATCTCCAAGGCACTGTTTACCTTTCTTACAGCC TGGGAGGCTTGTTTCTCTTCAATGCACTTCAAGTGATGACGATCCTCCTATTATTATTGAGGACCAGTTGACATGGGGGT TGGTCATTAATTTTGAAAGGGTTAAAAGTGTTTCTGAAGATGATGTAAGTATTAAACCAGAGGACGCATCTTACAATGTT GATATTCTTACAAGATGTATGGTGAGCAAGGATAAAATTGGGAAAAAATCTGTTAAGATTGTTCCTCTGAAAGAAGTTGG AGAACCTCTAGTGGTTTCAGTTCCAATCTCTCAGATTAATACAATTAGCAGTTTGCGGTTATATATACCAAAGGATCTTT TGTCATTGGAAACTCGGCAAAACACGCTGAAAAAAGTGCTGGAAACTCTTTCTAGATTCGGTGAGAAAGGATTGCCACTT CTAGATCCTGAAGAAGACATGAAGATTCAAAGCAACTCATACAAAAAAGCATCTCGTAGGATAGAGGCTTTGGAGAGCCT ATTTGAAAAGCATGAAATTGCGAAGTCACCACTTATAAAGCAGAAGTTAAAGGTTTTACAGAGGAAGCAAGAACTGACTG CAAGGATAAAGTCCATTAAGAAAACAATAAGATCTTCTACTGTTTTAGCCTTCAAGGATGAACTTAAGGCAAGAAAGAGG GTTCTTCGCAGGCTAGGATATGCTACAAGTGACAATGTGGTGGAATTGAAAGGGAAGGTTGCTTGTGAAATTAGTAGTGC AGATGAACTGATCTTAACAGAACTAATGTTCAGTGGTGTGTTAAAGGACATAAAGGTTGAGGAAATGGTTTCTCTCCTCT CTTGTTTGGTCTGGCGAGAAAAAATTCATGACGGTGCCAAGCCTCGGGAGGAACTTGATCTGCTTTTTGCACAATTACAA GACACTGCTCGGAGAGTTGCCCAACTTCAGCTTGAATGCAAGGTGGAAATTGATGTTGAGAGCTTCGTGAAATCGTTTAG GCCTGATATTATGGAGGCTGTGTATGCGTGGGCGAAAGGTTCGAAGTTTTATGAGATCATGGAAATTACACAGGTCTTTG AAGGCAGCTTGATTAGAGCAATTAGAAGACTTGAGGAAGTTCTTCAGCAGTTAATAGAAGCAGCCAAGTCAATTGGAGAG ACTCAACTTGAGACAAAGTTTGAAGAGGCTGTGTCCAAGATCAAGAGGGATATTGTCTTCGCAGCATCCTTGTATTTGTA A
Protein sequence (LotjaGi1g1v0553600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSLKRKSPEEPTTQLQRGEELQYDCVHDVSYPHGYIHPPPPSSSSSSSSSSTHTEPAKKFPFTLDPFQSQAITCIENGE SVMVSAHTSAGKTVVALYAIAMSLRDGQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSM QYKGSEITREVAWIIFDEVHYMRDRERGVVWEESIVMSPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTP LQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPV ILFSFSKRECEFLAMQMAKMDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEI LFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGIDERGICILMVDEKLEPSTAK MMVKGAADSLNSAFHLSYNMLLNQMRCEDGDPENLLRNSFYQFQADRAIPDHEKQIKALEEERESIVIEEENSLKDYYHL LEQHRSLNKEVRDIVLSPRHCLPFLQPGRLVSLQCTSSDDDPPIIIEDQLTWGLVINFERVKSVSEDDVSIKPEDASYNV DILTRCMVSKDKIGKKSVKIVPLKEVGEPLVVSVPISQINTISSLRLYIPKDLLSLETRQNTLKKVLETLSRFGEKGLPL LDPEEDMKIQSNSYKKASRRIEALESLFEKHEIAKSPLIKQKLKVLQRKQELTARIKSIKKTIRSSTVLAFKDELKARKR VLRRLGYATSDNVVELKGKVACEISSADELILTELMFSGVLKDIKVEEMVSLLSCLVWREKIHDGAKPREELDLLFAQLQ DTARRVAQLQLECKVEIDVESFVKSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLIEAAKSIGE TQLETKFEEAVSKIKRDIVFAASLYL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 62 | 62 | - | – | |
| PIRSF | 6 | 986 | 981 | 0.0 | ||
| PANTHER | 20 | 986 | 967 | 0.0 | – | |
| PANTHER | 20 | 986 | 967 | 0.0 | – | |
| CDD | 26 | 237 | 212 | 3.01299E-137 | – | |
| Gene3D | 37 | 237 | 201 | 7.1E-82 | – | |
| MobiDBLite | 41 | 58 | 18 | - | – | |
| SMART | 61 | 244 | 184 | 2.5E-33 | ||
| Pfam | 67 | 214 | 148 | 1.8E-18 | ||
| ProSiteProfiles | 73 | 229 | 157 | 23.832 | ||
| SUPERFAMILY | 75 | 473 | 399 | 1.96E-47 | ||
| CDD | 237 | 471 | 235 | 7.54308E-60 | – | |
| Gene3D | 238 | 491 | 254 | 4.8E-84 | – | |
| ProSiteProfiles | 304 | 502 | 199 | 12.321 | ||
| SMART | 370 | 459 | 90 | 1.8E-17 | ||
| Pfam | 380 | 459 | 80 | 3.2E-5 | ||
| Gene3D | 498 | 977 | 480 | 1.3E-161 | – | |
| Pfam | 513 | 784 | 272 | 1.5E-69 | ||
| Gene3D | 520 | 785 | 266 | 1.3E-161 | – | |
| Coils | 529 | 549 | 21 | - | – | |
| Gene3D | 586 | 716 | 131 | 1.3E-161 | – | |
| Coils | 727 | 754 | 28 | - | – | |
| SMART | 809 | 986 | 178 | 1.7E-82 | ||
| Pfam | 811 | 981 | 171 | 1.1E-49 | ||
| Coils | 872 | 892 | 21 | - | – | |
| Coils | 941 | 961 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | RNA helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | RNA catabolic process | The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. |
Expression pattern of LotjaGi1g1v0553600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…