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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0572100 |
| Transcript ID | LotjaGi1g1v0572100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | mRNA-capping enzyme; TAIR: AT3G09100.2 mRNA capping enzyme family protein; Swiss-Prot: sp|O55236|MCE1_MOUSE mRNA-capping enzyme; TrEMBL-Plants: tr|A0A0R0FB81|A0A0R0FB81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0572100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:110573483..110580978) extracted from Lotus japonicus Gifu genome v1.2.
CTGGTCATGCCTTTGACACGATTTCAGCTGATTTTTTGGGCCCCACAAGTAATCAAATGTGTTATTCTATTAAATATCTC TTCAATAACACAATTTTATTAACTGTCTATTCCAATCAAAGTCCTTGACAGGATTTCCATTTGGCTTTCCGGTCATGCCT TTGACACAATTTCAGCTGATTTTTTGGGCCCCACGAGTAATCAAATGTGTTATTCTATTAAATATCTCTTCATTAACACA ATTTCTAAAAGCCTGCTCTGTTCTAGGAATGTGAAGAAAGTAAGAGACGATTGAAGAGAGAACGTTCAGATTACAGACCT GTGCAAGCATCACAGTCACCTGGACATGATCAGCCATTCCATTCAAAGATCCATAAATCCTATGATAGAAGTAAGCTTCC CCCAGGTAAGGATTTCTTTCCCTGCTCAACTTGCTTCCCAGCCAGTGGTAATTGGTGATGTTATTTCATTATATCTTTCC TCAACTATTTATTATTTTCAAACAATGCCATTCGCTGCAGAATTTATATGTGACAGAAGCAATTTGGTTAATCTTTTCTA AAATTTGTTATTAGGTAAATAGATTTGGCTTATTTTAAAGTTACAAGCAGCTTGAGTTTTATTTGGGGCTGAGTGAAGGT TGAGTTATCCAAGCAAATACATGACATTGGAGGTTTTCTATTTTTGAAATGCTGATCAATAGCTATTATCCCAATTTTTC CTTAAGTCATTTGATATATTTATTACAATATATTTTATATGACAGATTAAGATTTTTGTTAATTTTAGTCAAAATAATTT GGTATTTCATTTTATTATATACATGCAGGTTGGTTGGATTGCCCTCCATTTGGCCTGGAAATTTTTTGCATGATACCTTC TAAGGTTCCTCTTGGTGAATCATTCAATGAATATATTGTTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAAC AGAGAGTTTTAGGGAGAAAAGTAAGTAAATATTATTCAAAAAACAAAACTCTTTTATTAGATTTTAGTCTATATTGTATG CTTTTTTATTAGATTTTAGTCTCTATCCTACCCTTGGGTTGCTTCATTTTTTACTGCCTTCTTACAGTCTATTGTGTTGG CTTGCAGCTTGGTCTGGTGATTGATTTGACGAATACTTCTAGATACTATCCAGTATCAGATCTAAAGAAAGAGGGTATCA AACATGTTAAGGTTTGTTGTTGGCAACTATTTCTTGCCAACCAAAGATCTTTTTTTCCCTTTTTATGTCACTAAAACTAT GGCCCCTCTTTCTTATCCTTACATTTGAAGATCATTGTTCTGGTTTAGATTCAATGCAAGGGCCGCGGTTCTGTACCTGA TAATTTATCTGTTAATCATTTTGTCTATGAGGTTTGTTTCTTTCTTAATAATATAGTTTGGTGTTCCTGAGTTTTTAGAA GAATATGACATCTATTTCTCTTTTTATGGTAGGCTTGCATGTTGTTATTTACATGAAGAAATTGAGATTACTGATACTTT AAAAAAAAAAAAATTGATCTAATGATTTCATATTTGCTTAAACTAATTTTTTTAATCATTTTTCTAGAGTATTTCGTATA AGCTAAATGAAAGCTGAAGTTGATTCTCTAGTAATTATTGGATGTTTTCAATTGTTATACCATCTGGATTTCTTTTTTCT TTAAATTTTGTTTTGTTTAATATTTAGTTTTATATCAATATTATATAGTTTTTTATTCTTTAACACGGTTTTGTAAGTTT ATGCACAAATGTGATATGATTTTTGTTTCATTTGTGTTTTGAAAATAACAAAAAGAAAACAATCAATGAATGGTTTGTTG ACTTTGTTCTCTTTGGAGACAAAAGAAAGTGCTTTTTATTGTCTTATTGCTCCAACATCATTTTGATCACAAGTTTTTAA CGATGTGATTATTTTACACTCCAGGTTACCCAATTTCTGTCGCGTCAAAAACTGTCAAAAAAGTTTATACTTGTTCATTG TACACATGGTCACAATCGAACAGGATACATGATCATTCATTATCTAATGCGCACAATGTCAATATCGGTTACTCAGGTCA GCTTTGGGGGTTACCATATTTTATATCTTTGTTAAAGATGTTACTTGACTTTAGTATTTATACTTTTTCTTGCCTTCTCT GCAGGCAATAAAAATATTTTCTGATGCACGCCCTCCTGGAATCTATAAACCAGAGTATATTGATTCCTTATACACATTTT ATCATGAAAAAAGGCCTGAAATGATAGTTTGTCCTCCTACCCCGGAGTGGAAGAGAACTCTTGAACGTGTTGATCTCAAT GGTGAAGCAGTTCCAGATGATGATAATGATGATGATGATGATTATGATGGAATGGCGGCCTCTCCTTTGCATGTATGCAT AATATCGAAAGTGAATTCTGATATTTTTGCATTTTTTTATATCTCAGACTATATGTTACCTTATTACATTCTTGGACTTG GTTGTTAATGATTTGTACTTCAGATGCTTTTGTCCAATGTTGATTAAATCTTGATCTCCTTCCTATTTCTCCAGGAGAAC CATGAGGCCGACACAATAATGACAAATGATGATGTTTTGGGAGATGAGATACCTACTGATCAGCAAGATGCATTTCGACA GTTTTGCTTTAAAACGCTTAAATTGGGTGTTGGGGTAAGCCTTCTAAATGGGTGTCTCAGTGAGTTTATTACTTGGATTT CTTTTGTGTTGTCAACTCAGTTATGCACCTGCTTAATGCACCTCTTATGCTTGTTATATAGCCATTTTACTAATTCTTTT AGTGCAGGCTAGAGGACAAATGCATTTTCCTGGGTCGCACCCTGTTTCTCTAAACAGGTAAGTTTATTTAAGTCAATATG TTATATTAATTAAGCAATAAACTTGGGGTTTCTAGTTTGTTGGCTACTTTACTTTGATATACCCTTCTTTTTGCCATAAG TAGTCGCATGTTGGTGCTGGTGATTATTCTTTTGCACATTTAACGATTGAAAATGAGTCATGTGTGTGACTTATCACTGA GGGTGCTGTGTGAAATTAAATCTACCCCTAAATTTACCCAGAGTTGAGTTTTTTAAATCTACCCCTAAATTTGTTAGTAG AGAAGGAAAGGGGGATAAGAATCCTCCTAAACCAAAGAACAAAACAAAGAACTAAGAAAAATGAATACTTTTTTTGAAAT TCTTTATCTTTATATGACCTCTTTTGTACTCCCTTCGTTTCATTTTAACTGTTCAGACAGAGAAAAAAAAGGGAATTATT AAGAAATGCAATTAATGTTTTTATCTTTCACGAACATATGATTTAATTTCCTACTTTACCCTTTAATATGCATTTTTATC TCATTTATTCTTCTCATAAGGGAATTATTTGGAAAAACATCAATTAATGCTCCCTCATAATTCTAAGTTGATAGATATAC ATAAAAAAGAAATTCTCTCTAAGTGGACAGTTAAAATGAAACAAAGGGAGTAACTTTTTCCCGTTCAGAGCTACAAGCCT AAAATTACAACCATTGTTCCTTTACAGAGAATCAAGAAACTATTAACTTTTCTCCATACTATAAAATTTAAATATCTCTT CCAAAGATTGTCATTTATTTTTACACTTCCATAGTTTTGTGTGTTAGTTAGTAACTATATTACTTGATTGTAGTAGTTAT TTTCAAGACATTGTTCATTATTGACCTGACCTTTTTATCTGTATATGTTACATGTTAAATTCAATTCCTTGGTATGCAGG GATAATTTACAGCTGTTACGACAGCGTTATTATTATGCTACGTGGAAAGCCGATGGAACAAGATATATGATGCTCATAAC TATGGATGGATGTTACTTGATTGATAGAAACTTTAATTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGGTTAAAAATG ATGTACGTGTGATAAACTGCTAATTTATTGTAGAAGTTTCTGTTAGTGTTTGTTGGAGCTGTTTTAACTTAAGTGCACAA ACTGAGATCTTCACATCTTTGGGTTCCAAGGGCTTGCCAGAGAAAACTCACCACTTCACATTACTTGATGGGGAGATGAT TATTGATACAGTACCAGATTCAAGAAAGCAGGAAAGGAGATACCTCATTTATGATCTGATGGCAGTCAACCGTGCATCAG TAATAGAGGTTTGATTTATTTATCTGTAATTTCAGAATATAAAGCTGGATGTTCTCATTTTGGTTTTGACTGTATGGTTT CATACTTTAGGGATGGGAAGTCTTTTGGGCTTGCCTCTAGCAGTAACCAATTTGCATTGTGGGAAAATGTTTTCTTCATT TCAAATTCTTGCGGTAACCAACTACGCAAATGCAGCCGTACTTTTTTCTGAACAGCATACCATAATTTTTTTTGTCACAA TGGAGTTGTTGCTTCTTTTCATTTTAATTTATTTTCTAGACAACAATATAGCAGTTTTTTCTCTTAAAATTTGGGCTAGG CCTAACTTAATCCCCAAAGCAGGATTAAAACAGGAAATATTAGTGGAATGCCAACTAACAAAGAGAAAATCGTCTTCATA ATCCATTGACTTAAGCATACTAGTCAATAGCGCGCTAGCGGCGTAGCAGCTCCCTGGCACTATTGAGATGAAATAGCGGC GCACCTGGCACCTCACAATAGCTGCCGTAGCGGCTGTAGCGGGGCCGGCTGCTACGGGATTGACTACTATGGACTTAAGC AAGTATATTGGCTATGATGAATATTATGACAGGGATATTTTTTTTCTTGGATGTCTAGTTCCTTTTATTCCTCATGTCAA CAACACCTTCAAGTACCCATAATTTTTAAACTGAAGTATCGGTCAATAGAAACATATATGTATTTGAAGCAAAGTAGGTT GCTAGAGATGTAATATAGCCATTCTTGGGCCTTCAACTAAGCGCTTAAACTTGTAGGAGAGTTGATCCTTGATATGATAT TAGAGTCTCTTTGGCCAACAGATCAAAAAGTTGAGGTAGGAAGACCTGTGCCCGCTCCATACTTCTAGCCCAATGGATTC TTGCATGAGGATGCATTGCAGTTGTAATAAAGTCATTTGTAAATCTTCACGCATCGGTTTAAGTTTTTAGGAGTTTTGAT CCTTGACATAGCTGAGTAAAAAAGGAATGAAAACTGATGCTGTTGATAAGTGAAGATGACCTCTTTACGTGTTGAACCTC AAGACTTATAGTTTAGAAATAGATCCCATGGTGAATATTTCAGTCGCATTTTCTTTAAAGATGAAGTACCCTAAAATTGA TTTAACATTTTTTATCATCAAGTTGATCATGACTTAAGTGTCTGAACAGTTTTTCATTTAATGTTTTCTTTGTTATTTTT ATTGATAGGAAGTGTGACTAGCAATGAATGATTAATAGTTCAAACTTGTGCAGCGACCTTTCTACGAACGGTGGAAGATG CTAGAGAAGGAAGTAATTGACCCCAGGAATCAGGAACGGTTCCAGAGCAAAAATGCATATTACAGATATGACATGGAGCC CTTCAGGGTATGCGTCTCTAACCTTAAATTGTGCCTAGTAAATTATATGATTTTCCCTTGGTAGTGTGTCCATTGATATA TCTTAATTTTTTAGGTGAGGAGGAAAGATTTTTGGCTGCTCTCTACTGTCACAAAACTTCTAAAAGAATTCATTCCGAAA CTCTCACATGATGCGGATGGTCTTGTATTTCAGGTGGGCTTAGATCACTTTCGTTGTATGAAATGAGGATGAGATTATCT CTTCTGACTTGTTTAATAACTTGCTTCTGGCTAATGCCCAGCTGTCAAGTAATGGTTTGTGGCCTTTTAAGATATTTGTT TTTCCCATTGGTTCTCTCTCACATCAGGGTCTACATACTTCTGCAACTTATTCAGCATGAGAATGGATATCCTTGTGGCT TCTATAGTGATCTTAATATGATGTCTGGTAAAAGAGACATTATACCTAGCCTAGCCCATAGAGGATCAATGTTACCTAGA CTAGCTCATAGTCCAGGTACATTGGTCCTTTCATTTTATTTGCTCCTTACCACACACCATGTTTCCTTTTCTTTTCCTTC TGTTATTGATGTGAATGGAGGTTGTTCTGACCATATTTTTATAAGCAGGGTTGGGACGATCCTTATATACCACGCACTCA TGAAGGCCTCTTAAAGTGGAAGTATGCTGATCTGAATTCAGTTGATTTTCTTTTTGAGGTGGTATCATTGACCTATTACA TATGTTGTTGGATAATACTCTTTCTTCTTTCACTCCACTTGTCTTTTGGTCACTTCAACTTTATTGCTGATGCACCCATC TAATTTCTAGCTGCTTGTGTTCACAGATTGTCGATGGTCGTCAACTACTTTTTCTCTATGAACGAGGAAAAAGGAAACTC ATGGAAGGGTGTGGGGTTGCATTCGAAGGTCAGGAAGATTTTTGTTGTATTAATTGTCCTACTCATTCAGTTTTGGTGTT TATAATTTCTACAAAATATCTTAGAATATCATCAGTATATCTGAGAATAATTTAGAATATCTTAAAGGATATTTTGAATA TATTGTGTAGTCAATTAGTTATTCCCTATATTTATTGTGTTTCCTTATTTAATTAGGGTTAGTAGTCTTATGACTCTTGT CACATCCGTGGGCTCGGGAAACAGTGATATTACTATTGAATAGTGCCTAAACTATTAGTATAAAAAGGACCAATGGTTCA GCATTTTGCATTTGAATTCATTATTTTATTCTCTTCCCCCTCCCCCTTTCCAACCTAAAATTAATTTCAACAACAATGGT AGGATTTCATGCTTCATGGTATTTTTGGAAGAAAATAAGAACATTGCTTCATTGTAGAATAGGAAATTCCAGTCATGATC ATGGCTTTATTGGTTTCTCATTATGATACTATATTCATGTATGTCAATGCAGTATCGATATTGGAATTTTCTAGCATCCA CCTGAAAAGTGTGTGTATCCGCAGCAGTGTCTCAGTTTTTGGGACAATGCTTAGTAATACTATTCCGTGTATGGTGTGAT GCTTATGTTTTGAAGTCTGCAGCTTGTCTGAATTTTTTTTTTGTTGCATTCATTGCAAATGCTTAACAGAAATTTAAATT TTGCAGAAGGTTCAGACCCCTTGCTGTATTCTGAAAAGATCATAGAGTGTTCTTGGGATTCTGACAAACAGAAATGGATA TTCAAACGAGTCAGAACAGATAAGTCAACTCCAAATGACTTTAATACATACAAGAAGGTCCTCTTTCTGTTTGCCAACTC CTCTGATTTTTAATTTCCTCGTCTTTCAATCTGTGCATATTATTCAAGTCATTGGCGTAATTTATTACAGGTGATGCAAA GTATAAAAGACAATATCACAGAGGATATCCTGTTGAATGAAATAAACGAGATAATTCGCCTTCCCATGTATGCTGACAGG ATAAAAATTGACAGCAAAGCCACTAATATGAAGCGAAGGTAAATCAGAGGCTATGA
CDS sequence (LotjaGi1g1v0572100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTTTGACACGATTTCAGCTGATTTTTTGGGCCCCACAAGTAATCAAATGTTCCTTGACAGGATTTCCATTTGGCTT TCCGGTCATGCCTTTGACACAATTTCAGCTGATTTTTTGGGCCCCACGAGAATGTGAAGAAAGTAAGAGACGATTGAAGA GAGAACGTTCAGATTACAGACCTGTGCAAGCATCACAGTCACCTGGACATGATCAGCCATTCCATTCAAAGATCCATAAA TCCTATGATAGAAGTAAGCTTCCCCCAGGTTGGTTGGATTGCCCTCCATTTGGCCTGGAAATTTTTTGCATGATACCTTC TAAGGTTCCTCTTGGTGAATCATTCAATGAATATATTGTTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAAC AGAGAGTTTTAGGGAGAAAACTTGGTCTGGTGATTGATTTGACGAATACTTCTAGATACTATCCAGTATCAGATCTAAAG AAAGAGGGTATCAAACATGTTAAGGTTACCCAATTTCTGTCGCGTCAAAAACTGTCAAAAAAGTTTATACTTGTTCATTG TACACATGGTCACAATCGAACAGGATACATGATCATTCATTATCTAATGCGCACAATGTCAATATCGGTTACTCAGGCAA TAAAAATATTTTCTGATGCACGCCCTCCTGGAATCTATAAACCAGAGTATATTGATTCCTTATACACATTTTATCATGAA AAAAGGCCTGAAATGATAGTTTGTCCTCCTACCCCGGAGTGGAAGAGAACTCTTGAACGTGTTGATCTCAATGGTGAAGC AGTTCCAGATGATGATAATGATGATGATGATGATTATGATGGAATGGCGGCCTCTCCTTTGCATGAGAACCATGAGGCCG ACACAATAATGACAAATGATGATGTTTTGGGAGATGAGATACCTACTGATCAGCAAGATGCATTTCGACAGTTTTGCTTT AAAACGCTTAAATTGGGTGTTGGGGCTAGAGGACAAATGCATTTTCCTGGGTCGCACCCTGTTTCTCTAAACAGGGATAA TTTACAGCTGTTACGACAGCGTTATTATTATGCTACGTGGAAAGCCGATGGAACAAGATATATGATGCTCATAACTATGG ATGGATGTTACTTGATTGATAGAAACTTTAATTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGGTTAAAAATGATGGC TTGCCAGAGAAAACTCACCACTTCACATTACTTGATGGGGAGATGATTATTGATACAGTACCAGATTCAAGAAAGCAGGA AAGGAGATACCTCATTTATGATCTGATGGCAGTCAACCGTGCATCAGTAATAGAGCGACCTTTCTACGAACGGTGGAAGA TGCTAGAGAAGGAAGTAATTGACCCCAGGAATCAGGAACGGTTCCAGAGCAAAAATGCATATTACAGATATGACATGGAG CCCTTCAGGGTGAGGAGGAAAGATTTTTGGCTGCTCTCTACTGTCACAAAACTTCTAAAAGAATTCATTCCGAAACTCTC ACATGATGCGGATGGTCTTGTATTTCAGGGTTGGGACGATCCTTATATACCACGCACTCATGAAGGCCTCTTAAAGTGGA AGTATGCTGATCTGAATTCAGTTGATTTTCTTTTTGAGATTGTCGATGGTCGTCAACTACTTTTTCTCTATGAACGAGGA AAAAGGAAACTCATGGAAGGGTGTGGGGTTGCATTCGAAGAAGGTTCAGACCCCTTGCTGTATTCTGAAAAGATCATAGA GTGTTCTTGGGATTCTGACAAACAGAAATGGATATTCAAACGAGTCAGAACAGATAAGTCAACTCCAAATGACTTTAATA CATACAAGAAGGTGATGCAAAGTATAAAAGACAATATCACAGAGGATATCCTGTTGAATGAAATAAACGAGATAATTCGC CTTCCCATGTATGCTGACAGGATAAAAATTGACAGCAAAGCCACTAATATGAAGCGAAGGTAA
Protein sequence (LotjaGi1g1v0572100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLTRFQLIFWAPQVIKCSLTGFPFGFPVMPLTQFQLIFWAPRECEESKRRLKRERSDYRPVQASQSPGHDQPFHSKIHK SYDRSKLPPGWLDCPPFGLEIFCMIPSKVPLGESFNEYIVPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLK KEGIKHVKVTQFLSRQKLSKKFILVHCTHGHNRTGYMIIHYLMRTMSISVTQAIKIFSDARPPGIYKPEYIDSLYTFYHE KRPEMIVCPPTPEWKRTLERVDLNGEAVPDDDNDDDDDYDGMAASPLHENHEADTIMTNDDVLGDEIPTDQQDAFRQFCF KTLKLGVGARGQMHFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNFRRVQMRFPCRVKNDG LPEKTHHFTLLDGEMIIDTVPDSRKQERRYLIYDLMAVNRASVIERPFYERWKMLEKEVIDPRNQERFQSKNAYYRYDME PFRVRRKDFWLLSTVTKLLKEFIPKLSHDADGLVFQGWDDPYIPRTHEGLLKWKYADLNSVDFLFEIVDGRQLLFLYERG KRKLMEGCGVAFEEGSDPLLYSEKIIECSWDSDKQKWIFKRVRTDKSTPNDFNTYKKVMQSIKDNITEDILLNEINEIIR LPMYADRIKIDSKATNMKRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 41 | 656 | 616 | 0.0 | – | |
| PANTHER | 41 | 656 | 616 | 0.0 | – | |
| MobiDBLite | 51 | 84 | 34 | - | – | |
| Gene3D | 63 | 170 | 108 | 7.5E-18 | ||
| PIRSF | 74 | 172 | 99 | 3.6E-33 | ||
| SUPERFAMILY | 86 | 255 | 170 | 1.05E-39 | ||
| CDD | 90 | 235 | 146 | 2.49103E-53 | – | |
| SMART | 121 | 240 | 120 | 0.0015 | ||
| Pfam | 168 | 238 | 71 | 2.5E-13 | ||
| PIRSF | 168 | 660 | 493 | 1.5E-185 | ||
| ProSiteProfiles | 169 | 232 | 64 | 12.263 | ||
| Gene3D | 171 | 260 | 90 | 2.7E-26 | ||
| ProSitePatterns | 185 | 195 | 11 | - | ||
| Gene3D | 291 | 534 | 244 | 1.4E-79 | – | |
| SUPERFAMILY | 299 | 535 | 237 | 9.78E-43 | – | |
| CDD | 335 | 535 | 201 | 4.59965E-89 | – | |
| Pfam | 339 | 534 | 196 | 1.4E-76 | ||
| ProSiteProfiles | 430 | 562 | 133 | 9.806 | ||
| SUPERFAMILY | 537 | 648 | 112 | 3.6E-23 | ||
| Gene3D | 576 | 641 | 66 | 2.2E-22 | – | |
| Pfam | 579 | 631 | 53 | 1.6E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA ligase (ATP) activity | Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m). | ||
| Molecular function | MRNA guanylyltransferase activity | Catalysis of the reaction: GTP + (5')pp-Pur-mRNA = diphosphate + G(5')ppp-Pur-mRNA; G(5')ppp-Pur-mRNA is mRNA containing a guanosine residue linked 5' through three phosphates to the 5' position of the terminal residue. | ||
| Molecular function | Polynucleotide 5'-phosphatase activity | Catalysis of the reaction: 5'-phosphopolynucleotide + H2O = polynucleotide + phosphate. | ||
| Molecular function | Protein tyrosine phosphatase activity | Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Biological process | DNA recombination | Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | ||
| Biological process | 7-methylguanosine mRNA capping | Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Protein tyrosine/serine/threonine phosphatase activity | Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate. | ||
| Biological process | Dephosphorylation | The process of removing one or more phosphoric (ester or anhydride) residues from a molecule. | ||
| Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
Expression pattern of LotjaGi1g1v0572100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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