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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0150100 |
| Transcript ID | LotjaGi3g1v0150100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr|I1KCC0|I1KCC0_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi3g1v0150100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:20186894..20193865) extracted from Lotus japonicus Gifu genome v1.2.
ATTAACTCTTTTTTTCTGCTGTTAATATCCAAAATAGGTGCTATGAACAGGAAGAGCCAAAAGAAACCTGTTGTTTCCAA AACTAAAGATGAAGTTAAGGCTGGAGATAAAAAGAAGCGGAGTTTGTCAAAGAGCAGTGAGCAGCCTGCTGCTACTTGCA AAAGGCCAAAACGAGCTGCAGCATGTGAAAATTTCAAGGAGAAATCTTTTTCCATATCTGAGAAATCCTGTCTTATTGAA TCAAAGAAGGACCAGATTGTAGATGAAGAAATACTTGCTGTCCGCCTGACCTGTGGACAGGACGATGGCCGTCCAAATAG GAGACTTACAGACTTTATCCTTCATGATGAAAGTGGTACAGCACAGCCACTTGAGATGCTGGAAATTAATGATTTATTTA TCACTGGGGTTATATCGCCACTAGAAGGAAGTACAGAGAAGAAAAAGGAGAACGGTGTTAGATGTGAAGGCTTTGGTCGA ATCGAATCATGGGATATATCTGGATATGAAGATGGCTCTCCAGTTATATGGATTTCGACTGATATTGCTGATTATGATTG CCTAAAACCAGCCCCTAGTTACAAAAAATTTTATGATCATTTCTTTGAAAAGGCCCGTGCATGTATAGAAGTATACAAAA AACTTGCAAAGTCTTCTGGTGGGGACCCTGACATAAGTCTTGATGAGTTACTTGCTGGTATAGCACGGTCTATGAGTGGC AGCAAGTTCTTCTCTGGAACTGCATCTCTAAAAGATTTTGTTATTTCTCAGGGCGAGTTTATTTATAAGCAGCTCATAGG TTTAGACATGTCAGACAAGACAAATGACAAGATGTTTGCAGATATTCCTGCTCTTGTCTCTCTTAGAGATGAGAGTAAGA AACAAGCAAACTATGCACATGCACAAGTGGCGCCTTCAAATGGGAGTTTAAGAATTGATTCTGGAATTGAAGATGAGGAG AAGAAGGATCCGATGGATTCAATACCTTCTTTAGCTGAGGAAGATGATGATGTAAAGTTAGCACGACTATTACAGGAAGA AGAGAATTGGAAATCCATGAAGCAGAAGAAAAATCCCAGATCAGCCTCATCTAACAAATACTACATCAAAATTAATGAAG ATGAGATTGCCAATGATTATCCCCTCCCTGCTTATTATAAAACCTCCCTTCAGGAGACAGATGAATTCATAGTTTTTGAT AATGACTATGACATATATGACACTGAAGAACTTCCTCGAAGCATGCTGCACAATTGGACTTTATACAACTCTGATGCAAG ATTGGTTTCCTTGGAACTTCTTCCTATGAAACCTTGTTCAGAGATTGATGTAACCATCTTTGGCTCAGGTATAATGACTT CAGATGATGGAAGCGGGTTCCATCTTGATACAGAGTCTGGCCAATCTTCTTCTACTGCTTCTGGAGCACAGGAAACTGAT GGAATGCCAATTTATTTAAGTGCCATAAAGGAGTGGATGATTGAATTTGGATCATCTATGATTTTCATATCCATCCGAAC TGATATGGCCTGGTATGTTACCTCTTGTCTAAAATGAATGGTATTTCTAATTTTTTATACTTCTCAGATCTTTAGTAAGA TCCTATTGATTTCTGTATGTTTAGTTTATACTATGTACCAATCTTAGTTGGAATAAACTAAAATTAGAGAATTCATATGA TTACTTGACTATCAAACTGTTGATATCAACTATTTGCAAATAAAACTATTGCAAGTACATGGGGTTAGCTGTCCGAGATC AATTTGTCATATGAATGAGACATCTATGCATACTTGAAGAATATGTACATATACATAAACACGCTCATGTATCTCTTCGT GTGTTTGTGTGTATCTTATAATATTTGGTTCTAAAATGTCATAGTTCCTTTGTGAAATTGTGACCAGGTTCAACCATATT TCATTCCTTTCAGGTATAGACTTGGGAAACCATCAAAGCAGTATGCTCCTTGGTATGACACAGTAATGAAAACTGCAAGG GTTGCTACAAGCATTATCACCTTGTTGAAGGAGCAAAGCCGAGTATCGCGACTTTCCTTTGGAGATGTCATCAAGAAAGT AGCTGAGTTCACTCAGAACCATAAGTCCTATATTTCTTCTGATGCATCGAAAGTTGAGAGCTATGTTGTTGTCCATGGAC AGATAATTTTGCAACTGTTTGCAGAATATCCTGATGAAAAGATCAGAAAGTCTCCATTTATTTCTGGTCTCGTGAACAAA ATGGAAGCACGACACCATACTAAATGGTTAGTGAAGACGAAGAAAGTTTTGACAAGGAGTGAACCAAATTTAAATCCTAG GGCAGCAGTTTCTATTGTATCCAAGAGGAAAGCTATGCAAGCTACAACAACAAAGCTGATCAATAGAATATGGGGAGAGT ATTACTCAAACCACATGCCAGAGGATTCAAAAGAGGGCACTGCCAGTGAACTAAAGGATGAGGATGAAGTGGAGGAACAA GAAGAAAATGAAGATGAGGATGCTGAGGAGACAATATGCTTGGAGGGAACCCAAAAGTCACACTCAGTTTCCACACAAAC CAAGACATTTTCTGCTGACGGAGAAATAAGATGGGAGGGGGAACCTGAAGGGAAGACCTGTTCTGGAAATCTTCTTTATA AACAGGCAATTATCCATGGTGAAGTTGTTTCTGTGGGAAAATCTGTGTTGGTGGAAGTTGACGAATTGGGTGAACTTCCT GATATATATTATGTTGAATATATGTTTGAATCAAAGAATGGAAAAAAAATGTTTCATGGTAGGATGATGCAGCGTGGTTG CGAGACTGTTCTTGGCAACACTGCAAATGAGGGAGAGGTGTTTTTGAGTAACGAATGCAGGGATTTGGGACTGCAGGATG TTAAGCAGACAGTTGTTGTTAATATTCAAAAAAGGCCTTGGGGACATCAGCATCGAAAGGATAATATCATTGCAGACAAA ATGGATAGGGCTAGAGCAGAAGAAAGGAAGAAGAAAGGACTACCCACTGAATATTACTGTAAGAGCTTGTACTGGCCTGA AAGAGGTGCTTTCTTCAGCCTTCCATTTGACACTTTGGGTCTAGGATCTGGAGTTTGTCACTCTTGTAAACTAAATGAAG ACCAAAAGGAGAAGGATATTTTCAAAATAAATTCATCGAAGTCTGGTTTCCTATTGAGAGGAACAGAATATTCTCTTGAT GATTACGTTTATGTAAGTCCTTTATACTTTGATGAAAAGATAGCGCAAGGAACATACAAGAGTGGGAGGAATGTTGGGTT GAAAGCTTATGTTGTGTGCCAAGTTCTTGAGATCATTGTCCAAAAGGAAATAAAAAAAGCTGAAATAAAGTCTACTGAGG TCAAAGTCAGAAGGTTCTTCCGACCGGATGATGTATCAAATGAGAAGGCATACTGCTCTGATGTACAAGAGGTGAGAGCT ACTTACAAATTTTAACTTAATAATTTGATAAACACACCCACACAGGAGACAAACATTAATAATTCTACTGAAAGGGCAAG TAAAACTTACCCTAGCTTTTGAATCTGACATTATGATGCAAATATCTTCAATGGTTTTATTTACTAAGCCTTCCATGCTT TATCTTTTTACGTCCATTTTGCTGTTATCTTTTGAATATTGGTTCTACTTTGTGTATCTTGTTTCTGAGTTTTATATTGA CTTAGATTTCATGATATAAAATTTCAGGTGTATTACAGTAATGAAACACATATAATCTCTGTAGAATCCATAGAAGGAAA ATGTGAAATCAGAAAAAAGAAGGACATCCTTGAAAGCAGTTCCCCTGGAATATTCCAAAATGTTTTTTTCTGCGAGCACT TGTATGATCCTGCTACTGGGTCAATCAAGCAGGTATTGTTTTATTGGCCTTGTTGTTTGTGTTTAGTATGCTTGCTAATC CATCAGATAAACCTGGAAAGCTATCAGGATGTTTTAATTTATGCAGTTTTATGCTTTTTATTTGAAACAAGTGTGGACTA TTTGTACTCATGTTACTGAACTGATCCATATGTAGCTGGTCATTATCCTGTAAACCGTGTTCTGTTCCCTTGTCATTTAA TTAAATTTCTGTCCTGGTCATTCTCTAGCTGGTCATTATCCAGGCAAAATTGTTGTATAATATTTGGACTATTTGGTATG ACGTTGTTTTCAATTTTTAATTCCAAATTACTTCCAACATTTGACCCCCTAACAACATAAAATATTTATAAACAGTTTGC AACCAAGAAGTGCCACTACCGAGCAACTTAGGTCTTTTACTTAACTTAAAAATCAACTCTTTTGAAGCAGATGGTGTCAT ATACACACGGTCCAGTGGTAGTGTATACACTGTTGGTGGATCAAAATTAAATGTAAATTTTCAAATTTTAAATCATTCCA AATATACTATAGAAATATTGTTGTTGCCGCTTTTTTATATTTTTTCAAACTCTTATTATGCATTTAAGTTTAGCTTAGTG CTGATTAATTTATTAGATTATTATTGTTGCTGTTGGAAATATGGGAAAGGAATATATCAATATTATTATTATTTTCTTCT TCTTTTTATTATTATTATTATTTATTTATTTATTATTATTATTCATGATGTTAATTAAACATTCTGGTACAAGTAAAAAG GTTGCATTTTATGATTTTCAATAATTAACTATTTTCTTGTTCCAATGCTCGACAGTTACCAACTCAAATCAAAGTAAAAT ATTCAAGTGGACATACAGCTGATGCTGCAGCTAGAAAGAAAAAGGGAAAATGTACAGAGGGAGATGACATTTCAGATACT GATAAGGAAAGAAATTTATCAAATGAAAAACGTTTAGCAACGTTGGACATTTTTGCCGGCTGTGGTGGCTTATCAGAGGG ATTGCAGCAGTCAGGTAATCTTAACTACACTACCAATAAACAATTATATATACTGTCAACGCATAATTTAACTTGTGTTA CTGCTTGCACACTTCAGGAATTGCATCAACTAAATGGGCTATTGAGTATGAAGAACCAGCCGGGAATGCGTTTAAAGCTA ATCATCCTGACGCGTTGGTGTTTATTAACAATTGCAATGTTATTCTTAGGTAAACTATCCAGTAGAGATAAATTATTTCA GGCCACAAGGTTAAATGGAGTGGAACCCATTTAAGTGACTCAGAAATGCGTTGTAATGTAGGGCTGTAATGGAGAAGTGT GGGGACCTAGATGATTGTATCTCAACGACTGAGGCGGCAGAATTGGCTGCGAAGCTTGACGAGAATGAATCAAGTAGTTT ACCAATCCCTGGGCAAGTTGATTTCATTAATGGGGGACCTCCATGCCAGGTTTGTCTAGTTGTTGTCTTTGTTTCCATTT TACTGATAATAGGACCTCATGATATATTGATTTTTGAATTATGTGTTGTTCCAGGGTTTCTCTGGAATGAATAGATTTAA CCAAAGCACTTGGAGTAAAGTCCAGTGCGAGATGATATTAGCATTCTTATCCTTTGCTGATTATTTCCGGCCAAGGTATT TCTTGTTGGAGAATGTCAGGACCTTTGTGTCCTTTAATAAAGGTCAGACATTCCGTTTAACCTTGGCTTCACTTCTTGAA ATGGGTTATCAGGTAAAATTATATAGTTGTATCTTTCTTCCTATGTAATTACACTTTAGACTTTATGAATAGAATCTTGA GGAACTAATGAATGCTGATTTTGCTGGTCCAAAAGGTAAGGTTTGGTATCCTTGAGGCGGGAGCTTACGGGGTTTCCCAG TCAAGAAAAAGGGCATTTATATGGGCAGCCTCTCCTGAAGATGTGCTTCCTGAGTGGCCAGAACCATTGCATGTCTTTTC GGCCCCTGAGTTGAAAATCAGATTGTCCGGAAATGTCCAATATGCTGCGGTTCGCAGTACTTCAGACGGTGCCCCTTTAC GTGCAATAACTGTCCGAGACACCATTGGTGATCTCCCACCTGTGGGCAATGGAGCCTCAAAAACAAACATGGAGGTATCT AATATAGGAAAGATACATGTTCCCTCTTTAAATAATGAATTGCCTATACACTCATTACTCACCAGGTTTTGTGTTGCACA GTATCAACATGATCCTGTCTCATGGTTCCAAAAGAAGATTCGACGGGATATGGCTGTCTTGACAGATCATATCTCAAAGG AGATGAATGAGTTGAACTTGATTCGGTGTCAGAAAATACCGAAGAGACCAGGTGCTGATTGGCGTGACCTTCCAGATGAG AAGGTAAAATTAAATTTGAATAAAACTTTAGCATAACCGTTTTGTGATTTATCTAACTTGTGATATCTTATAAAATGCAG ATAAAGTTGTCTACTGGACAAGTTGTTGATTTGATACCATGGTGCTTGCCAAACACAGCTAAGAGACACAATCACTGGAA GGGATTGTTTGGTAGGTTGGATTGGCAAGGTAACTTCCCAACTTCCATCACAGATCCTCAACCAATGGGGAAAGTTGGAA TGTGCTTCCATCCTGATCAGGATAGGATTCTTACTGTTCGTGAATGTGCACGCTCTCAAGTAAGTTGTTACCATAAATGC TATGATAAAATGGAATCCTGACATACTGTGATTTGATTTGTCATGACTGAATTTTTATGGAGAATACTGAACATGTTATC CAAGTATTAGTTCATAGTTTCGTTTGTGTTGTCCAAAACATTAGATTGCATAATTGGTTGGTGGGTGTAATAGTCCTTAA TTACTTAGCAATGGTCCCAACTCCCAACCCCCCAAAATCTCTGCCTAAGAAATTGGAAGATGTCATCTGATTTGGTATGA TCTCTTGTCTTATCTTTTTTATCTATAAATGCAGGGCTTCCCAGACAACTACCAATTTTCTGGCAACATTATACACAAGC ACAGGCAGATTGGTAATGCTGTTCCTCCTCCTCTAGCATTTGCTTTAGGGAGAAAGCTCAAGGAAGCAGTGGATAGTAAG GGCTCCACTTAG
CDS sequence (LotjaGi3g1v0150100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAGGAAGAGCCAAAAGAAACCTGTTGTTTCCAAAACTAAAGATGAAGTTAAGGCTGGAGATAAAAAGAAGCGGAG TTTGTCAAAGAGCAGTGAGCAGCCTGCTGCTACTTGCAAAAGGCCAAAACGAGCTGCAGCATGTGAAAATTTCAAGGAGA AATCTTTTTCCATATCTGAGAAATCCTGTCTTATTGAATCAAAGAAGGACCAGATTGTAGATGAAGAAATACTTGCTGTC CGCCTGACCTGTGGACAGGACGATGGCCGTCCAAATAGGAGACTTACAGACTTTATCCTTCATGATGAAAGTGGTACAGC ACAGCCACTTGAGATGCTGGAAATTAATGATTTATTTATCACTGGGGTTATATCGCCACTAGAAGGAAGTACAGAGAAGA AAAAGGAGAACGGTGTTAGATGTGAAGGCTTTGGTCGAATCGAATCATGGGATATATCTGGATATGAAGATGGCTCTCCA GTTATATGGATTTCGACTGATATTGCTGATTATGATTGCCTAAAACCAGCCCCTAGTTACAAAAAATTTTATGATCATTT CTTTGAAAAGGCCCGTGCATGTATAGAAGTATACAAAAAACTTGCAAAGTCTTCTGGTGGGGACCCTGACATAAGTCTTG ATGAGTTACTTGCTGGTATAGCACGGTCTATGAGTGGCAGCAAGTTCTTCTCTGGAACTGCATCTCTAAAAGATTTTGTT ATTTCTCAGGGCGAGTTTATTTATAAGCAGCTCATAGGTTTAGACATGTCAGACAAGACAAATGACAAGATGTTTGCAGA TATTCCTGCTCTTGTCTCTCTTAGAGATGAGAGTAAGAAACAAGCAAACTATGCACATGCACAAGTGGCGCCTTCAAATG GGAGTTTAAGAATTGATTCTGGAATTGAAGATGAGGAGAAGAAGGATCCGATGGATTCAATACCTTCTTTAGCTGAGGAA GATGATGATGTAAAGTTAGCACGACTATTACAGGAAGAAGAGAATTGGAAATCCATGAAGCAGAAGAAAAATCCCAGATC AGCCTCATCTAACAAATACTACATCAAAATTAATGAAGATGAGATTGCCAATGATTATCCCCTCCCTGCTTATTATAAAA CCTCCCTTCAGGAGACAGATGAATTCATAGTTTTTGATAATGACTATGACATATATGACACTGAAGAACTTCCTCGAAGC ATGCTGCACAATTGGACTTTATACAACTCTGATGCAAGATTGGTTTCCTTGGAACTTCTTCCTATGAAACCTTGTTCAGA GATTGATGTAACCATCTTTGGCTCAGGTATAATGACTTCAGATGATGGAAGCGGGTTCCATCTTGATACAGAGTCTGGCC AATCTTCTTCTACTGCTTCTGGAGCACAGGAAACTGATGGAATGCCAATTTATTTAAGTGCCATAAAGGAGTGGATGATT GAATTTGGATCATCTATGATTTTCATATCCATCCGAACTGATATGGCCTGGTATAGACTTGGGAAACCATCAAAGCAGTA TGCTCCTTGGTATGACACAGTAATGAAAACTGCAAGGGTTGCTACAAGCATTATCACCTTGTTGAAGGAGCAAAGCCGAG TATCGCGACTTTCCTTTGGAGATGTCATCAAGAAAGTAGCTGAGTTCACTCAGAACCATAAGTCCTATATTTCTTCTGAT GCATCGAAAGTTGAGAGCTATGTTGTTGTCCATGGACAGATAATTTTGCAACTGTTTGCAGAATATCCTGATGAAAAGAT CAGAAAGTCTCCATTTATTTCTGGTCTCGTGAACAAAATGGAAGCACGACACCATACTAAATGGTTAGTGAAGACGAAGA AAGTTTTGACAAGGAGTGAACCAAATTTAAATCCTAGGGCAGCAGTTTCTATTGTATCCAAGAGGAAAGCTATGCAAGCT ACAACAACAAAGCTGATCAATAGAATATGGGGAGAGTATTACTCAAACCACATGCCAGAGGATTCAAAAGAGGGCACTGC CAGTGAACTAAAGGATGAGGATGAAGTGGAGGAACAAGAAGAAAATGAAGATGAGGATGCTGAGGAGACAATATGCTTGG AGGGAACCCAAAAGTCACACTCAGTTTCCACACAAACCAAGACATTTTCTGCTGACGGAGAAATAAGATGGGAGGGGGAA CCTGAAGGGAAGACCTGTTCTGGAAATCTTCTTTATAAACAGGCAATTATCCATGGTGAAGTTGTTTCTGTGGGAAAATC TGTGTTGGTGGAAGTTGACGAATTGGGTGAACTTCCTGATATATATTATGTTGAATATATGTTTGAATCAAAGAATGGAA AAAAAATGTTTCATGGTAGGATGATGCAGCGTGGTTGCGAGACTGTTCTTGGCAACACTGCAAATGAGGGAGAGGTGTTT TTGAGTAACGAATGCAGGGATTTGGGACTGCAGGATGTTAAGCAGACAGTTGTTGTTAATATTCAAAAAAGGCCTTGGGG ACATCAGCATCGAAAGGATAATATCATTGCAGACAAAATGGATAGGGCTAGAGCAGAAGAAAGGAAGAAGAAAGGACTAC CCACTGAATATTACTGTAAGAGCTTGTACTGGCCTGAAAGAGGTGCTTTCTTCAGCCTTCCATTTGACACTTTGGGTCTA GGATCTGGAGTTTGTCACTCTTGTAAACTAAATGAAGACCAAAAGGAGAAGGATATTTTCAAAATAAATTCATCGAAGTC TGGTTTCCTATTGAGAGGAACAGAATATTCTCTTGATGATTACGTTTATGTAAGTCCTTTATACTTTGATGAAAAGATAG CGCAAGGAACATACAAGAGTGGGAGGAATGTTGGGTTGAAAGCTTATGTTGTGTGCCAAGTTCTTGAGATCATTGTCCAA AAGGAAATAAAAAAAGCTGAAATAAAGTCTACTGAGGTCAAAGTCAGAAGGTTCTTCCGACCGGATGATGTATCAAATGA GAAGGCATACTGCTCTGATGTACAAGAGGTGTATTACAGTAATGAAACACATATAATCTCTGTAGAATCCATAGAAGGAA AATGTGAAATCAGAAAAAAGAAGGACATCCTTGAAAGCAGTTCCCCTGGAATATTCCAAAATGTTTTTTTCTGCGAGCAC TTGTATGATCCTGCTACTGGGTCAATCAAGCAGTTACCAACTCAAATCAAAGTAAAATATTCAAGTGGACATACAGCTGA TGCTGCAGCTAGAAAGAAAAAGGGAAAATGTACAGAGGGAGATGACATTTCAGATACTGATAAGGAAAGAAATTTATCAA ATGAAAAACGTTTAGCAACGTTGGACATTTTTGCCGGCTGTGGTGGCTTATCAGAGGGATTGCAGCAGTCAGGAATTGCA TCAACTAAATGGGCTATTGAGTATGAAGAACCAGCCGGGAATGCGTTTAAAGCTAATCATCCTGACGCGTTGGTGTTTAT TAACAATTGCAATGTTATTCTTAGGGCTGTAATGGAGAAGTGTGGGGACCTAGATGATTGTATCTCAACGACTGAGGCGG CAGAATTGGCTGCGAAGCTTGACGAGAATGAATCAAGTAGTTTACCAATCCCTGGGCAAGTTGATTTCATTAATGGGGGA CCTCCATGCCAGGGTTTCTCTGGAATGAATAGATTTAACCAAAGCACTTGGAGTAAAGTCCAGTGCGAGATGATATTAGC ATTCTTATCCTTTGCTGATTATTTCCGGCCAAGGTATTTCTTGTTGGAGAATGTCAGGACCTTTGTGTCCTTTAATAAAG GTCAGACATTCCGTTTAACCTTGGCTTCACTTCTTGAAATGGGTTATCAGGTAAGGTTTGGTATCCTTGAGGCGGGAGCT TACGGGGTTTCCCAGTCAAGAAAAAGGGCATTTATATGGGCAGCCTCTCCTGAAGATGTGCTTCCTGAGTGGCCAGAACC ATTGCATGTCTTTTCGGCCCCTGAGTTGAAAATCAGATTGTCCGGAAATGTCCAATATGCTGCGGTTCGCAGTACTTCAG ACGGTGCCCCTTTACGTGCAATAACTGTCCGAGACACCATTGGTGATCTCCCACCTGTGGGCAATGGAGCCTCAAAAACA AACATGGAGTATCAACATGATCCTGTCTCATGGTTCCAAAAGAAGATTCGACGGGATATGGCTGTCTTGACAGATCATAT CTCAAAGGAGATGAATGAGTTGAACTTGATTCGGTGTCAGAAAATACCGAAGAGACCAGGTGCTGATTGGCGTGACCTTC CAGATGAGAAGATAAAGTTGTCTACTGGACAAGTTGTTGATTTGATACCATGGTGCTTGCCAAACACAGCTAAGAGACAC AATCACTGGAAGGGATTGTTTGGTAGGTTGGATTGGCAAGGTAACTTCCCAACTTCCATCACAGATCCTCAACCAATGGG GAAAGTTGGAATGTGCTTCCATCCTGATCAGGATAGGATTCTTACTGTTCGTGAATGTGCACGCTCTCAAGGCTTCCCAG ACAACTACCAATTTTCTGGCAACATTATACACAAGCACAGGCAGATTGGTAATGCTGTTCCTCCTCCTCTAGCATTTGCT TTAGGGAGAAAGCTCAAGGAAGCAGTGGATAGTAAGGGCTCCACTTAG
Protein sequence (LotjaGi3g1v0150100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRKSQKKPVVSKTKDEVKAGDKKKRSLSKSSEQPAATCKRPKRAAACENFKEKSFSISEKSCLIESKKDQIVDEEILAV RLTCGQDDGRPNRRLTDFILHDESGTAQPLEMLEINDLFITGVISPLEGSTEKKKENGVRCEGFGRIESWDISGYEDGSP VIWISTDIADYDCLKPAPSYKKFYDHFFEKARACIEVYKKLAKSSGGDPDISLDELLAGIARSMSGSKFFSGTASLKDFV ISQGEFIYKQLIGLDMSDKTNDKMFADIPALVSLRDESKKQANYAHAQVAPSNGSLRIDSGIEDEEKKDPMDSIPSLAEE DDDVKLARLLQEEENWKSMKQKKNPRSASSNKYYIKINEDEIANDYPLPAYYKTSLQETDEFIVFDNDYDIYDTEELPRS MLHNWTLYNSDARLVSLELLPMKPCSEIDVTIFGSGIMTSDDGSGFHLDTESGQSSSTASGAQETDGMPIYLSAIKEWMI EFGSSMIFISIRTDMAWYRLGKPSKQYAPWYDTVMKTARVATSIITLLKEQSRVSRLSFGDVIKKVAEFTQNHKSYISSD ASKVESYVVVHGQIILQLFAEYPDEKIRKSPFISGLVNKMEARHHTKWLVKTKKVLTRSEPNLNPRAAVSIVSKRKAMQA TTTKLINRIWGEYYSNHMPEDSKEGTASELKDEDEVEEQEENEDEDAEETICLEGTQKSHSVSTQTKTFSADGEIRWEGE PEGKTCSGNLLYKQAIIHGEVVSVGKSVLVEVDELGELPDIYYVEYMFESKNGKKMFHGRMMQRGCETVLGNTANEGEVF LSNECRDLGLQDVKQTVVVNIQKRPWGHQHRKDNIIADKMDRARAEERKKKGLPTEYYCKSLYWPERGAFFSLPFDTLGL GSGVCHSCKLNEDQKEKDIFKINSSKSGFLLRGTEYSLDDYVYVSPLYFDEKIAQGTYKSGRNVGLKAYVVCQVLEIIVQ KEIKKAEIKSTEVKVRRFFRPDDVSNEKAYCSDVQEVYYSNETHIISVESIEGKCEIRKKKDILESSSPGIFQNVFFCEH LYDPATGSIKQLPTQIKVKYSSGHTADAAARKKKGKCTEGDDISDTDKERNLSNEKRLATLDIFAGCGGLSEGLQQSGIA STKWAIEYEEPAGNAFKANHPDALVFINNCNVILRAVMEKCGDLDDCISTTEAAELAAKLDENESSSLPIPGQVDFINGG PPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGA YGVSQSRKRAFIWAASPEDVLPEWPEPLHVFSAPELKIRLSGNVQYAAVRSTSDGAPLRAITVRDTIGDLPPVGNGASKT NMEYQHDPVSWFQKKIRRDMAVLTDHISKEMNELNLIRCQKIPKRPGADWRDLPDEKIKLSTGQVVDLIPWCLPNTAKRH NHWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDNYQFSGNIIHKHRQIGNAVPPPLAFA LGRKLKEAVDSKGST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 44 | 44 | - | – | |
| PIRSF | 2 | 276 | 275 | 3.9E-10 | ||
| MobiDBLite | 9 | 30 | 22 | - | – | |
| PANTHER | 30 | 1532 | 1503 | 0.0 | – | |
| PANTHER | 30 | 1532 | 1503 | 0.0 | – | |
| Pfam | 88 | 222 | 135 | 1.1E-37 | ||
| PIRSF | 256 | 672 | 417 | 3.6E-7 | ||
| Pfam | 395 | 548 | 154 | 1.7E-40 | ||
| MobiDBLite | 444 | 463 | 20 | - | – | |
| MobiDBLite | 445 | 463 | 19 | - | – | |
| MobiDBLite | 657 | 710 | 54 | - | – | |
| PIRSF | 668 | 942 | 275 | 7.6E-18 | ||
| Coils | 670 | 690 | 21 | - | – | |
| MobiDBLite | 671 | 690 | 20 | - | – | |
| MobiDBLite | 694 | 710 | 17 | - | – | |
| Gene3D | 707 | 887 | 181 | 1.6E-32 | ||
| CDD | 737 | 875 | 139 | 1.47167E-38 | – | |
| ProSiteProfiles | 740 | 874 | 135 | 12.668 | ||
| SMART | 740 | 874 | 135 | 9.8E-44 | ||
| Pfam | 741 | 874 | 134 | 3.1E-16 | ||
| Gene3D | 888 | 1091 | 204 | 1.4E-40 | ||
| CDD | 909 | 1110 | 202 | 1.63524E-97 | – | |
| SMART | 914 | 1053 | 140 | 8.7E-40 | ||
| ProSiteProfiles | 914 | 1053 | 140 | 17.84 | ||
| Pfam | 915 | 1053 | 139 | 6.3E-20 | ||
| PIRSF | 924 | 1427 | 504 | 2.6E-133 | ||
| ProSiteProfiles | 1098 | 1532 | 435 | 54.544 | ||
| Gene3D | 1098 | 1309 | 212 | 1.4E-69 | – | |
| PRINTS | 1099 | 1115 | 17 | 6.7E-14 | ||
| Pfam | 1100 | 1526 | 427 | 1.8E-47 | ||
| SUPERFAMILY | 1100 | 1527 | 428 | 1.91E-80 | ||
| TIGRFAM | 1101 | 1524 | 424 | 3.7E-38 | ||
| ProSitePatterns | 1195 | 1207 | 13 | - | ||
| PRINTS | 1236 | 1250 | 15 | 6.7E-14 | ||
| PRINTS | 1282 | 1295 | 14 | 6.7E-14 | ||
| Gene3D | 1348 | 1425 | 78 | 6.6E-28 | – | |
| PIRSF | 1421 | 1535 | 115 | 3.0E-54 | ||
| Gene3D | 1426 | 1491 | 66 | 9.2E-32 | – | |
| ProSitePatterns | 1507 | 1525 | 19 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Chromatin binding | Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. | ||
| Molecular function | DNA (cytosine-5-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Biological process | C-5 methylation of cytosine | The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule. |
Expression pattern of LotjaGi3g1v0150100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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