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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0263800 |
| Transcript ID | LotjaGi4g1v0263800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA mismatch repair protein mutS; TAIR: AT3G18524.1 MUTS homolog 2; Swiss-Prot: sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2; TrEMBL-Plants: tr|I1MUG2|I1MUG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:62763417..62772329) extracted from Lotus japonicus Gifu genome v1.2.
GTCAGTCAGAGACTCTTCCTCTTTCCATTCTTATACGCTCTCCACTCTCTCTGTCTCACGTTCTTCATACCCACGCACTT CACACAAACCTTCATCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAAAACCCTAATTTCTGAAATGGGGGAAAACAAC TTCGAAGATAAACTCCCTGAGCTCAAATTAGGTATCACATCATTCACAATTTTCTATTATTTTGTATTGATTCAATTGTT GTTGGTGACTGGTTGAAGCTTTCTAATGGTTTTTTCAACTGTTGCTAGATTCTAAGCAAGCACAAGGGTTTCTGTCATTT TTCAAAACCCTAACTGATGTAAGTATTTTCCTTTCTCCCCATTTTCAATCATTTCTCTCATAACTGAGAGTGTGTTATAA TTAGCATTACATGAATACCTCCATTTCCCCTTTTGGTTGCTAAAAGTGTGAATCATTCATAAACTCGAGTATGCTCATAA TATTGTTCTTTTTTCACTTAATTGAACTGTACCAATTTAACCTATGATACGTTTTTCAAAGGAATTTAATATGAACCTTT TCATCACATGCTTATTCTTGTTTAAATATTCTAAATTTTGGCATACAGTGTCTATTTATTAATTAGCTTTAGTCTTTTTT TTATCCTTCAAAAACATTTCTACCCAATTTATCGAGTGTTGTTTCATTGCAGTGTCAATCCTTCCCTAACTCATGTACTT AACAGCAAAAATTTGATATTACATTTTACTAGCACTTATTATTTTACATGTAATGAAATGTCCAAGTAATGTTGTTTAAT TATCTTTCCATGCCCGCTTCATTACTTAAATTCAATGCGACGAATACACATGTGGCTTACGTGCATGCAATTTATTTTTT GTCCCGTCACTTGCACAAGTTTAGTGGTTTTATTGCAGATTGTAAATTGTTATGATTTTTTACAATTTGTGGATTTAAAT TCCCATGTTTTTGTTACAGGACTCAAGGGCCATTCGGTTTTTTGATCGCCGGGTAAGTCTATGACCAATATTCATCTTTT GTTTATCATTCAATAGATGCCAAGTAGTACATTTACCATATATGCATGCCTGTTAGGTACTTTGAGAAACAGCATTTGAT TTCTGAAAAGTCATAATCTCTTCATTATTCACATATTTTTCTTTCGTGGATTAGCTAAAGAAGAATCGATGTTTGTAAAG ACACTTCTTTTACCTCAGCACCAAGCAGAGTTCCATTAGAAATTTTCCAAAGTTTTTATCCTGAAGTAATTTGAGCAGGA CTTGGTCCTATATTTTTCAATGGTCTTGTAGTCAAGTTAACTACTATATAATACATGCCATAATAAAAACAAATGGTGTT TACACATTAGTTTTACATTGTTTAAGTAGTGTTTAAAGCTTATTTTCCCAAAACTACCACCCTGTTTAAGAACCATTGCT TTGCTGTTTGTTTTCATCTTTTGAAGAGTTTTCACAATTTCCATCATAAATTATAAGTATGACTTCTTGTTAAATAGATT TTTCTGTCTATTGTGTCAGTGAGATTCTTTATTTTCATTTCCTCCTTCATTTTATGCACTATGATGATTATCATTGTATT AGATCTTAGAGGTCCTCTTTGAATTGTGCAGGACTATTATACTGCTCATGGTGAGAATGCAAATTTCATTGCCAAGACCT ACTACCACACTACTACTGCTTTGCGACAACTGGGAAGTGGATTAGATGCTCTTTCCAGTGTAAGTGTCAGTAGGAACATG TTTGAAACAATTGCACGTGATTTGCTTTTGGAGAGAACAGATCATACTCTTGAGGTCTATGAGGGTAGTGGTTCTAATTG GAGACTGGTCAAAAGTGGAACCCCTGGTAATATTGGTAATTTTGAAGATGTTCTGTTTGCTAACAGTGAAATGCAAGATT CTCCAGTTATTGTTGCACTGTCGCTTAATTTCCGTGAAAATGGTTGCACCATTGGGTTAGGGTTTGTTGATCTAACTAAG AGAGTACTTGGGATGGCTGAGTTTCTTGATGATAGTCACTTCACGAATGTGGAGTCAGCTTTGGTTGCTCTTGGCTGCAA AGAGTGTCTTGTTCCCATTGAGTCTGGCAAATCTACTGAAAATAGAATGTTGTGTGATGTGCTGACAAAATGTGGTGCGA TGTTAACTGAGAGAAAAAAATCTGAGTTTAAAACCAGAGATTTGGTACAGGATCTTGGCAGGCTTCTTAAAGGTTCTATT GAACCAGTTCGAGATTTGGTGTCTGGATTTGAATTTGCACCTGGTGCTTTGGGGGCATTACTATCTTATGCAGAGTTACT TGCAGATGAAAGCAATTATGAAAATTTTACTCTTCGTAGGTACAATCTTGATAGTTATGTGAGATTAGATTCTGCAGCCA TGAGGGCACTTAATGTCCTGGAAAGCAAAACTGATGCAAACAAAAATTTCAGTTTGTTTGGTCTCATGAATAGGACCTGT ACAGCTGGAATGGGAAAACGGTTATTGCACAACTGGCTAAAACAGCCATTACTAGATGTAAAAGAAATTAATTCCAGGCT GGATGTAGTACAAGCATTTGTAGAGGACCCTGTGCTACGCCAAGAACTGAGGCAGCATCTGAAAAGAATATCAGACATTG AGCGATTGGTGCACAATCTTCAGAAGCGAAGAGCTGGACTACAACATATTGTTAAGCTGTATCAGGTAAGTTTTTATCCA TATTTACTGTTAGGTTGCAATTGAAGATGTAGAATTTATCCTTTGCTATGGCTGTCTTACAACTGTATTTGCACTCGATT TGTGGAACACCTCTGAATTCTGTGATATAGTTCCTGACACTTTTTCTTTTTCTGCTCAGATTTTGTAAGTAATAGTTTTT TTTTTGTAAGATATATTGGGATGAAGAATCATTAAGAATTTCAGTAATTCTTTAATTAAGTTTACTGTTGTTATTCTTCA ATTTCAAACATATTCTTCGCTGTGTTGTTAAACATTTCATCATTAATGTCTAGAAGGGTCCCTCTGTCCTCTTTTTCTTG TGTTAAAATTGTATATGCAGCAGTGCAGTATGCCTATTATTGTATAAGAGCTTGCTTTACATCCACTCTAACCAAATTAT TGATTATATAGAACTGTTCATATTTAGCCACTGAAATGACCTCTTAACTCTATTTTTATCTTGAGTGCAGTCAAGTATAA GACTACCTTACATTAAAAGCACTCTGGAAGCATATGATGGACAATTTTCCTCAATGATGAAGAGTAGGTATTTGGAACCT CTCCAGTTATGGACTGATGACGATCACCTAAATAAATTTATTGGGCTTGTAGAAGCTTCTGTTGACCTTGATCAACTAGA GAACAGGGAATATATGATTGCTCCGAGTTATGATGCTACACTAACTAAACTAAAGGAGCAGCAAGAATTACTAGAGAGCC AAATACAGAACTTGCACAGACAAACTGCTGATGACCTTGATCTGCCTATAGACAAGGCATTAAAGTTAGATAAGGGCACC CAATTTGGACATGTTTTTAGAATCACAAAGAAAGAAGAGCCGAAAATAAGGAAAAAGCTCAACACCCAGTTTATTGTACT GGAAACCCGCAAAGATGGAGTTAAGTTTACTAACACAAAGCTCAAAAAATTGGGGGACCAGTACCAACAAATTCTTGAGG AGTACAAGAGTTGTCAAAAAGAGTTGGTTAATAGAGTAGTTCAAACGGCAGCAACTTTCTCTGAGGTGGGTATATTTAAT AACATGTTTTTATTAAACTAATTTTTAGGCAAAAGTTGTTATTTTTCCAAACACACTTATTAAAGAGTTTTCCTTATGCA GGTCTTTGAATCTTTGGCTGAATTAATTTCAGAGTTGGATGTGTTACTAAGCTTTGCTGATTTGGCTTCTAGTTGTCCCA CTCCCTACACAAGACCTGACATCACTTCATCGGTATTTAGTTAATGGTTACTTGCTTTTCTCATAATAACTGCATCATCT TCTTGCTTCCCCCCCTCCCTTTCTGTGTAACCCTATTTCGTTTGGAGAGGTCTTTTTGAGATTAGCATTGAAAATTTTCA TCTTGGCTTTAATAGGATGAAGGAGACATAATTTTAGAAGGCAGCAGACACCCTTGTGTGGAGGCACAAGACTGGGTGAA TTTTATACCAAATGATTGTAAGCTTGTAAGTATTCATGAGATCCCTGGAAAGTAAGAACCACTTCTCATTTTAAATTTTA GAAAGTAACAACTATTTTGCTTTTTGTAACAAACCAGATCAGAAGAAAAAGTTGGTTTCAAATAATAACAGGGCCTAACA TGGGCGGGAAATCAACATTCATCCGGCAGGTACTTATCTTATGTATCACTTTATTGGAGAAGCTAGCCAGTAGACACCAT CTTATTTTGTTATGAATTTGATGTCAGACTCCGTTATTCTACTTTTATGCTGATGTTAAGCATCACAATCAAGTTTGGGT GCCTGACCTTTCCTTATATAGGCATTTTTAGTCCTCTTACTATAGATGTATACAATTCAGATACTTGCATTCTTGCTACC TGTGGTTGGAGATTTGGTTAGCATAAAGTTTTCTCCATGCGTAGGTGGGAGTGAATATTTTAATGGCACAAGTTGGTTCC TTTGTTCCCTGTGACAAAGCCAGCATATCTGTTCGTGATTGCATCTTTGCCCGTGTTGGTGCAGGTGACTGCCAAGTGAG TCCCATACCATATTCTTTGCTTTTGTTAGTGGCATTTTTCCTTCTTAAAGCTTTATCTGAGACTTATTCTCAATATAAAC CCACTTTGTGGTGTGATTTTTAATGTTACTGTTAGGATTAGCTGTCTTTATTTGCCATGCATAAAATTGAGTTTCTTCTT TCTATGCCTCTTTAGTTTTATTTATTTTTATCAGGATAATAAATAATAACATTAATGAGATTGGGAGAGTGGGAGTTGCT TGAAACAGGTCAAAATTGTTTAGACTGTAATGGTATTACCAACGGCCAAATTATTATTTTTATCAAATGCCCATCGAGAA TGGTATTCTGTTATTTTTCTGAGGCTGCTATTTTAAGTAGTCTGATGCTGCTTATCAAATCTATAATTATATCCTTAATT AATATGAATTCCGATTTTTTGTTTACTTTCTCCCAGCTTCGCGGAGTCTCAACCTTTATGCAAGAAATGCTTGAAACTGC ATCAATATTAAAAGGAGCTACTGACAAGTCCTTGATAATCATTGATGAGCTGGGACGTGGAACATCAACTTATGATGGAT TTGGTTTGTTTCACTCTTAAGTGTTCCTTTAATGAGTTGGTGTTGCAATCTCTTAAAATCTGAATCATTGTCAGAATATG TGGACAACACTAAGGTTCTCACATCGTGCTTCTTGAGTGACCCATACAACAGCTTTAACCTAAAATAGGTTCTCATGAAC CATTTAAGTTCCTTCCTTTTAGATGAAAAAGGGAATTACTTTTTGCAAGTTTCATGGCTTAGAATTTCTTCTATTATTTT TATGTCTTCAGTCACTTGTTACTTTATATAGTGGGACCACTTTTGGAACTTTTATGATGCTGAAAATTCTCTGCTGTGAG AGTTCTTCATGGAGGGTTGGACCATTACATTGGCATCAACATATCCTAATACATTTATGTTTTGCAACATTGTCTTTGTA TAGGCTGCTGATTTGAAGTCCTTAATAAACGTTTAAGGGGATTGTAACAAGTTTGTACATTATATGCAGGTCTAGCTTGG GCCATTTGTGAGCACATTGTTGAAGTGATCAAAGCACCTACATTGTTTGCAACCCATTTTCATGAACTGACTGCATTAGC CCTTGAAAATGTAAGCGATGATCCACATAAGCAAATTGTTGGTGTGGCAAATTATCATGTTAGTGCACATATTGATGAGT CAACTCGGAAGCTAACCATGCTATACAAGGTAAATGCATTCCAAACATTCTTTTTTTTAAGCAAGTTGCCTATGAAGTAT TTACTTTTTGGTGCAACTTTTTTGATTTGCTACTCTTTGTGAGAAAAGAACTAAAAATGTTTTTTTTCGAGGTGGGCGAG TTTGCTTTTGTTTTTTTGAAAAACTTATCTAATTATCATAAAAAATTTATGCATGCTTTTAAATTTATAAAACTCTTGTT TCTTTAAAAAGAGGCAGAAAAAAGGGCCGGAGATTTGTTTGATTGTTTAACTCTTTGACACATTCCTGATAAAAAGAGAT GCTTTTTAAGTGGTAGAGCTCCTATTATGGCTATAAATCATCAGAAGGTATAAAGAAAAAGAATAGGTTTGAAACAAAGT TAATAGGGTTCATCTTCTTGCACTTTTTCTGTCTGGATTTAAATGTGCTGTTTTACCTTAAAGAACACCTTTTAAAGCTT AATTAGCCCAAGATCATAATACCTTATGCATGGTATTACGCTGATTTGGTGGGTTGGAGGCAGCTGTATTTTAATGATGG AGTATATTCTAATTTAAAGATATTAGATGAAACTGTTGTATCAATGATATTATTGGGTACACTTTTACCAGATTTCTCAA CTAAAACCTAATTGAAGAATTCAGTGTTGTTCATGCTTCAATGCTTTTTTCTCTCTCCAACCGCATTTCACATGCAAAAT CTTACTGGATTTTTCACCCCAAAAAATGTCCTTTCAAGACACGACACATCTTTCCGTTATGTTTTTTTTCCTAACTAAAG TTTACTGGAAGGTGATGTTGCAATGAAATTAAAGGATATGTGATGTTGTAAAAGAAACAAAACTAAAAATAATGAAATGA AGTAGATATATCTAGCCTCAGCTAAGGCTAAGAATCCTATGTGAAACTGTAAAAGAGTTGGTAAGATGTATTGGCATCCA TTATCCTTGAGCATATAAGTCATATTAAACTATATTTAGATTTCTGTTTATGATGGAAAGTCCTCTCTTATTTCTCACCA ACGGTGCATCTCTTCAAACAAGACTACAAAAGTGAAAATTGCTCAGAATTGTGAACAATCAATAGACAACCATCCGGTGT CATTTATGATCTTACATACTTAAAAGAAAGTAAAAGAGACAGTTTCCTCAAGAACACAATTTTTCGATATTGAATAACTA GCCATTCTGCCTACATAACTTATTACATCGAAACACATTATTTTTATTATGTATTTCATCCTTTAAAGTTTGTCCCAATG CTGCAGTCCAGTCATATAAATCTTATAGGACCCTTATTGTTGATTATGCACTCTGCATTCATTAAAAGATGCTAATATTG CAGATGACCTTTGTGTGATGATGAGTGTATTCCTTCTTACCTTCTCAAGAAGACTGGACATAATGTTCAGAAACTGTTAT ACTGTGGTCAAATTGCAATCTGCATTTGCATCAACTCATTATTTTTTTATGGGTTTGTACTTTTTAGGTTGAACCAGGAG CATGTGATCAGAGTTTTGGTATTCACGTTGCTGAGTTTGCAAACTTCCCTGAAAGTGTTGTTGCACTAGCTAGAGAAAAG GCAGCAGAATTGGAAGATTTTTCTCCTTCTGCCATATCCTTAATTGATACCACAGAGCAGGTATAACTAAGACTAGGTTC TGTTTTTGTGGCCCATTGGTATGGGATGAATATATTACTTCTCTTAGAGTAAACTGATGGGAAAACAAATCAAAAATTGG ATCATGCTATGTAACCTGTTATTTCAAGACGGGGAATAGTTTTGAAGGAATGGGAGGAATTGTAGAGTAAGAGTACTTCA ACCAGTATTCAATCATTATGAAAAAGTTAGCGAAATGATACAATGTGAGCACTATTTATGCAGCACATTAATAAGTAACT AATAAAAAACTCACATGGCCAACTAACCACCTAAGTAACAAACTAACTCACTAATCAATAGTTCTAATATATATCTCTAC ACAATTGCCATAAATTTTAAAATTATTCTCTTCATTATGAAAAAACCTGTCATTGAAATGAATTGCTAACATTTTGCTGT TATAATTTGTAGGCGGGTTCTAAACGTAAGAGAGTATTTGAATCTGATGACATGTCTCAAGGGGTTGCAAAGGCTCGCCA AATTCTTGAGGCATTTGTTGCTTTGCCACTAGAAACCATGGACAAAAGCCAAGCCTTGCAAGAAGTAAGCAAGTTAAAAG ACACTTTAGAGAAGGATGCCGAAAACTGTCATTGGCTGCAAAAGTTCTTGTAGTTTGAAAAGAAAAAGGAGTTAGTTGGT CGGGTAACCACGCATGTGAATTTTGAAGAGCTTTTTGTTGTACACCAAGTTTCCAATTACTTATGGTAAAAACAGAACTC TGCCATGGTGTATTTTGCAGATTGTAGGGGAGGCTGAAGTTTCTGGCTTAGCCATGCCTGAAAGAGAAATGTATATTCTA ATCTAGCTTTTTATGTTAGTTTTAAAATGCTTAAGAAGAACATGCAGGAAATCTTGTGTGCTTGCTTCCTGGAACCCCTT GGACAATATATTTAATAACAACTATTGATCAGTTTCATCATATTTTCTTGGTTTGACCTTAAAGTGTGGAAATTGAAACT CTACCATTAATGTGCACAATTTTATGGTTGAGACTGCAGAGAAACAAGGGAACAATTCAATTGGAAATAAAGATGAATGC AAGTTGTGCAGTTCCACTTGCAAATAAAAATCTTTTTCTCTACCTCCAAAAATCTGCTCCATGGTCAATGTCTTATTTCG GTTACTACTTCTGGATCTTATTTAAGTCTGATTATGGAGTATTGTAATCAGATAGATGTCTTGAAAATAGGTGTTAGCTA GTCGGAATTGCAATGGTGTACAGATTTTATGTCCAAGCTTGCTTTTCAAGCTATAGATAAATGTTTGGTTAGATGATGAT CAATTTGAGTTTCAGATGATATGTCAGTTGTTT
CDS sequence (LotjaGi4g1v0263800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGAAAACAACTTCGAAGATAAACTCCCTGAGCTCAAATTAGATTCTAAGCAAGCACAAGGGTTTCTGTCATTTTT CAAAACCCTAACTGATGACTCAAGGGCCATTCGGTTTTTTGATCGCCGGGACTATTATACTGCTCATGGTGAGAATGCAA ATTTCATTGCCAAGACCTACTACCACACTACTACTGCTTTGCGACAACTGGGAAGTGGATTAGATGCTCTTTCCAGTGTA AGTGTCAGTAGGAACATGTTTGAAACAATTGCACGTGATTTGCTTTTGGAGAGAACAGATCATACTCTTGAGGTCTATGA GGGTAGTGGTTCTAATTGGAGACTGGTCAAAAGTGGAACCCCTGGTAATATTGGTAATTTTGAAGATGTTCTGTTTGCTA ACAGTGAAATGCAAGATTCTCCAGTTATTGTTGCACTGTCGCTTAATTTCCGTGAAAATGGTTGCACCATTGGGTTAGGG TTTGTTGATCTAACTAAGAGAGTACTTGGGATGGCTGAGTTTCTTGATGATAGTCACTTCACGAATGTGGAGTCAGCTTT GGTTGCTCTTGGCTGCAAAGAGTGTCTTGTTCCCATTGAGTCTGGCAAATCTACTGAAAATAGAATGTTGTGTGATGTGC TGACAAAATGTGGTGCGATGTTAACTGAGAGAAAAAAATCTGAGTTTAAAACCAGAGATTTGGTACAGGATCTTGGCAGG CTTCTTAAAGGTTCTATTGAACCAGTTCGAGATTTGGTGTCTGGATTTGAATTTGCACCTGGTGCTTTGGGGGCATTACT ATCTTATGCAGAGTTACTTGCAGATGAAAGCAATTATGAAAATTTTACTCTTCGTAGGTACAATCTTGATAGTTATGTGA GATTAGATTCTGCAGCCATGAGGGCACTTAATGTCCTGGAAAGCAAAACTGATGCAAACAAAAATTTCAGTTTGTTTGGT CTCATGAATAGGACCTGTACAGCTGGAATGGGAAAACGGTTATTGCACAACTGGCTAAAACAGCCATTACTAGATGTAAA AGAAATTAATTCCAGGCTGGATGTAGTACAAGCATTTGTAGAGGACCCTGTGCTACGCCAAGAACTGAGGCAGCATCTGA AAAGAATATCAGACATTGAGCGATTGGTGCACAATCTTCAGAAGCGAAGAGCTGGACTACAACATATTGTTAAGCTGTAT CAGTCAAGTATAAGACTACCTTACATTAAAAGCACTCTGGAAGCATATGATGGACAATTTTCCTCAATGATGAAGAGTAG GTATTTGGAACCTCTCCAGTTATGGACTGATGACGATCACCTAAATAAATTTATTGGGCTTGTAGAAGCTTCTGTTGACC TTGATCAACTAGAGAACAGGGAATATATGATTGCTCCGAGTTATGATGCTACACTAACTAAACTAAAGGAGCAGCAAGAA TTACTAGAGAGCCAAATACAGAACTTGCACAGACAAACTGCTGATGACCTTGATCTGCCTATAGACAAGGCATTAAAGTT AGATAAGGGCACCCAATTTGGACATGTTTTTAGAATCACAAAGAAAGAAGAGCCGAAAATAAGGAAAAAGCTCAACACCC AGTTTATTGTACTGGAAACCCGCAAAGATGGAGTTAAGTTTACTAACACAAAGCTCAAAAAATTGGGGGACCAGTACCAA CAAATTCTTGAGGAGTACAAGAGTTGTCAAAAAGAGTTGGTTAATAGAGTAGTTCAAACGGCAGCAACTTTCTCTGAGGT CTTTGAATCTTTGGCTGAATTAATTTCAGAGTTGGATGTGTTACTAAGCTTTGCTGATTTGGCTTCTAGTTGTCCCACTC CCTACACAAGACCTGACATCACTTCATCGGATGAAGGAGACATAATTTTAGAAGGCAGCAGACACCCTTGTGTGGAGGCA CAAGACTGGGTGAATTTTATACCAAATGATTGTAAGCTTATCAGAAGAAAAAGTTGGTTTCAAATAATAACAGGGCCTAA CATGGGCGGGAAATCAACATTCATCCGGCAGGTGGGAGTGAATATTTTAATGGCACAAGTTGGTTCCTTTGTTCCCTGTG ACAAAGCCAGCATATCTGTTCGTGATTGCATCTTTGCCCGTGTTGGTGCAGGTGACTGCCAACTTCGCGGAGTCTCAACC TTTATGCAAGAAATGCTTGAAACTGCATCAATATTAAAAGGAGCTACTGACAAGTCCTTGATAATCATTGATGAGCTGGG ACGTGGAACATCAACTTATGATGGATTTGGTCTAGCTTGGGCCATTTGTGAGCACATTGTTGAAGTGATCAAAGCACCTA CATTGTTTGCAACCCATTTTCATGAACTGACTGCATTAGCCCTTGAAAATGTAAGCGATGATCCACATAAGCAAATTGTT GGTGTGGCAAATTATCATGTTAGTGCACATATTGATGAGTCAACTCGGAAGCTAACCATGCTATACAAGGTTGAACCAGG AGCATGTGATCAGAGTTTTGGTATTCACGTTGCTGAGTTTGCAAACTTCCCTGAAAGTGTTGTTGCACTAGCTAGAGAAA AGGCAGCAGAATTGGAAGATTTTTCTCCTTCTGCCATATCCTTAATTGATACCACAGAGCAGGCGGGTTCTAAACGTAAG AGAGTATTTGAATCTGATGACATGTCTCAAGGGGTTGCAAAGGCTCGCCAAATTCTTGAGGCATTTGTTGCTTTGCCACT AGAAACCATGGACAAAAGCCAAGCCTTGCAAGAAGTAAGCAAGTTAAAAGACACTTTAGAGAAGGATGCCGAAAACTGTC ATTGGCTGCAAAAGTTCTTGTAG
Protein sequence (LotjaGi4g1v0263800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGENNFEDKLPELKLDSKQAQGFLSFFKTLTDDSRAIRFFDRRDYYTAHGENANFIAKTYYHTTTALRQLGSGLDALSSV SVSRNMFETIARDLLLERTDHTLEVYEGSGSNWRLVKSGTPGNIGNFEDVLFANSEMQDSPVIVALSLNFRENGCTIGLG FVDLTKRVLGMAEFLDDSHFTNVESALVALGCKECLVPIESGKSTENRMLCDVLTKCGAMLTERKKSEFKTRDLVQDLGR LLKGSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYENFTLRRYNLDSYVRLDSAAMRALNVLESKTDANKNFSLFG LMNRTCTAGMGKRLLHNWLKQPLLDVKEINSRLDVVQAFVEDPVLRQELRQHLKRISDIERLVHNLQKRRAGLQHIVKLY QSSIRLPYIKSTLEAYDGQFSSMMKSRYLEPLQLWTDDDHLNKFIGLVEASVDLDQLENREYMIAPSYDATLTKLKEQQE LLESQIQNLHRQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVLETRKDGVKFTNTKLKKLGDQYQ QILEEYKSCQKELVNRVVQTAATFSEVFESLAELISELDVLLSFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEA QDWVNFIPNDCKLIRRKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVST FMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALALENVSDDPHKQIV GVANYHVSAHIDESTRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSAISLIDTTEQAGSKRK RVFESDDMSQGVAKARQILEAFVALPLETMDKSQALQEVSKLKDTLEKDAENCHWLQKFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 6 | 940 | 935 | 0.0 | ||
| Gene3D | 7 | 120 | 114 | 7.1E-32 | ||
| Pfam | 22 | 127 | 106 | 4.7E-15 | ||
| PANTHER | 23 | 937 | 915 | 0.0 | ||
| PANTHER | 23 | 937 | 915 | 0.0 | – | |
| Gene3D | 121 | 290 | 170 | 6.9E-47 | ||
| Pfam | 142 | 282 | 141 | 2.7E-17 | ||
| SUPERFAMILY | 296 | 610 | 315 | 1.31E-66 | ||
| Pfam | 298 | 605 | 308 | 2.2E-35 | ||
| SMART | 313 | 641 | 329 | 1.2E-103 | ||
| Gene3D | 313 | 606 | 294 | 1.4E-89 | – | |
| Coils | 369 | 389 | 21 | - | – | |
| Gene3D | 465 | 549 | 85 | 1.4E-89 | – | |
| Pfam | 468 | 565 | 98 | 7.9E-18 | ||
| Coils | 472 | 495 | 24 | - | – | |
| Coils | 552 | 572 | 21 | - | – | |
| SUPERFAMILY | 615 | 860 | 246 | 6.11E-50 | ||
| Gene3D | 616 | 937 | 322 | 3.1E-108 | – | |
| CDD | 629 | 859 | 231 | 1.45849E-148 | – | |
| SMART | 658 | 856 | 199 | 4.3E-118 | ||
| Pfam | 661 | 859 | 199 | 7.5E-81 | ||
| ProSitePatterns | 739 | 755 | 17 | - | ||
| Coils | 912 | 932 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Mismatch repair | A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. | ||
| Molecular function | Mismatched DNA binding | Interacting selectively and non-covalently with double-stranded DNA containing one or more mismatches. | ||
| Cellular component | Mismatch repair complex | Any complex formed of proteins that act in mismatch repair. |
Expression pattern of LotjaGi4g1v0263800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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