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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0389600 |
| Transcript ID | LotjaGi4g1v0389600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-kinase, putative; TAIR: AT5G20480.1 EF-TU receptor; Swiss-Prot: sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR; TrEMBL-Plants: tr|I1K4C2|I1K4C2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0389600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76809350..76813423) extracted from Lotus japonicus Gifu genome v1.2.
GTGGGAATACTATAAATACAGATGCAAGCTGGAACTTAATATCACAAACCATAGAAACTAAGCATGGCTTTGTTTTCACA CTTTCTTCTTCATTTAGCCTTCTTAATCATTCTCCTCCCCCTTGATTTACAGAACCTTTTGGTTGGTGTATCATCAACCA CTCTAAGCATCAGCTCAGACAGAGAAGCTTTGATCTCACTGAAGTCTCAGCTGAGTAATGACATCAGTACTTCTCACCCA CTTTTATCCTCTTGGAGCCAGAGCTCCTCTCCTTGTAATTGGACTGGTGTCCTCTGTGACAAGCGTGGCCAAAGAGTCAC TGGCTTGGACCTTTCAGGCTTTGGTCTCTCAGGCCATTTAAGCCCCCATATTGGTAACCTGTCCTCTCTTCAGACCCTCC AGTTGCAGAATAACCAGCTATCAGGAGTGATTCCTGACCAAATTGGCAACCTATTCAGTTTGAGAGTTCTAAACATGAGC TCAAACATGTTGGAAGGAGTGCTTCCTTCAAACATCACCAAATTGGAGGAGCTCCAGATTCTTGATCTGTCCTCAAACAA GATCACCAGCAGGATTCCTGAAAACATTAGCAGCTTGAAAAAGCTGCAGGTCTTGAAACTTGGAAAGAACAGCCTCTATG GTGCAATCCCAACTTCTCTAGGGAACATTTCCACTCTCAAGAATATCAGTTTTGGCACCAACTCTCTCAGTGGCTGGATT CCCAGTGAGCTGGGCAGGCTTCATGATTTGATTGAGCTTGATCTCGTTCTCAACAATCTCAATGGGACTGTTCCACCTGC TATATATAACCTGTCTTCCCTTGTTAACTTGGCCTTGGCTTCAAACTCCCTGTGGGGTGAGATTCCTCAGGATGTTGGTC AGAAACTTCCAAAACTCCTAGTGTTCAATTTCTGCTTCAATAAGTTCACTGGTAGAATTCCAGGGTCTTTGCACAACCTC ACCAACATTCGAGTCATTCGTATGGCTTCCAACTTTTTGGAAGGAACAGTGCCACCTGGTTTGGGAAATCTCCCATTTCT TCACATGTATAATATTGGGGGTAACAGGATTGTCAGCAACACAGGTCTGGATTTCATTACTTCTTTGGCAAACAGCACCC ACCTGAACTTTCTGGCAATTGATGGCAATATGCTGGAAGGTGTGATTCCTGAAACCATTGGCAATCTCTCCAAGGATCTC TCAATACTTTACATGGGACAGAATCGTTTCAATGGAAGCATACCCTCCTCCATTGGCCTTCTCAGTGGCTTAAAGTTGTT AAACTTGTGCTACAATTCATTCACTGGAGAAATCCCACAGGAGTTAGGCCAGTTAAAGAAACTACAAGAGCTATCTCTGG CTGGAAATCAGATATCAGGTGAAATTCCAAATTCCCTTGGTAATCTCCATAAGTTGATCCAAATTGATTTGTCAAGGAAT AATCTTGTGGGTAGCATTCCCATCAGTTTTGGGAATTTTCAAAACCTGCTCTACCTGGACTTATCCAACAACAAGCTCAA TGAAAGCATACCTGTGGAAATCCTCAACCTCCCAACTTTGAGCAATGTTTTGAACTTGTCAATGAACTTGTTGAGTGGAC CAATACCACAAGTTGGGAAATTGATCAGTGTTTCCTCCATTGACTTTTCTAACAACCAGTTGAATGGTAGCATCCCCAGC TCATTCAGCAGTTGCTTGAGCTTGGAAAAGTTGTTTTTGGCCAGGAATCTTCTTTCAGGTCCCATTCCAAAAACTTTTGG AGATCTAAGAGCCTTGGAAACCTTGGACCTGTCCTCTAACAAACTCTCTGGGTCCATTCCTATTGAACTTCAAAATCTTC ATGTTCTTCAGCTTTTAAACCTCTCTTACAATGATTTAGATGGAACCATTCCAGTTTTCAAAAATATCTCTGATGTTCAC TTGGAAGGCAATAGAAATCTCTGCTATTCAACATGTGTGCCTCATGGCCATGGAAGAAGAAATGCTAGGCTTTACATCAT CATAGCAATCGCGGTAACATTGATACTATGTCTCACCACAATTGGTTTTTTGCTATACATAAAGAACAGCAAGGTGAAGG TAACAGCAGCAGAACCTGAACTGCTAAAGTCTCATCATGCTCCAATGGTCTCCTATGAAGAGCTTCGTTTAGCAACTGAA GAGTTCAGCCAGGAGAATTTAATAGGAGTTGGAAGCTTTGGCTCAGTGTATAAAGGCCATCTAAGTCATGGAAAAACTGT TGCTGTGAAAGTGCTTGACACTCTAAGAACTGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAAACTATGAAGAACTCAA GGCATCGGAATCTGGTTAAGGTGATCACATCATGCTCCAGTCTTGACTTAAAACACAATGATTTTCTGGCTCTGGTGTAT GAGTACTTGAGTAATGGGAGCTTGGATGATTGGATTAAGGGGATAAGAAAGCATGCAAGTGGAAATGGGTTGAGCCTCAT GGAGAGACTGAATGTAGCTATTGATGTTGCTTGTGCATTGGATTATCTACACAATGATAGTGAAAATCCTATCGTGCATT GTGATTTGAAGCCCAGCAACATTCTCCTGGATGGAGACATGACTGCAAAAGTTGGAGACTTTGGATTGGCCAGGTTACTG ATTCAAACATCAACTAATAGTCAAGTTTCCATTAGCTCAACTCATGTCCTCAGGGGTTCCATTGGTTACATACCTCCAGG TTAGTATCCTAAAACATTCCTCTTTAATTGATACTACTTGATAATTTTTTTAACTTATTAAACTGGACCAAGATTTGCTG TCCCAAATGATGTCTCAGCCTTCTCTCACCACTGAGATTGTGTCATGTCAATTAAAAACCACCCATATAAGATTATAAAT ATCATATCCACGTATTTTTTAATTGACATGTCATAAGTGACAGGAAATGAGATGTTGTATGGAGTCAGAGGATCTAGATC CCATTAAACTGTAGGAATAGAAAATCTTATGTCCATTTTTCTGTCTCACCATTTAAATCGTGTCATGTCAGTTAAAAACC ACATATCTAAATGTATAACCGCCTCATGTACCTAGATCAAGTGCCTTTTTCATTTGACAAGTCAAAATCAATTTGGGCTA GAAGATTTTCATCTAAATCTAAACTATAGAAAAAAACATAAACTTGGTGCTATAATGCTCTAGCTATGCGCGAGATCCAG AGAGTTTTGGACCTCCTTTGTGGATCTAATGTAGGCAATCTTACCTTGCATTTTTGCAAGACCTTGATTCCACGGCTCGA ACCTGTGACCGCAAAATTTCATGACAGAAACCTTACCGTTGCGCTGAGGGTGGCGTCTTTCATCTAAATTATAGATGCTT AGTATAAATATCAATATGTTATTCTATTCCTTTCTTTGTGAACCTTTTAATACCCCCAGTGAAACATGAAATAATTATAT AGTGTTACTTGTGATCTCATGCTTTGTTTAACAATATAGTAATTGTAAATTTTCAGAGTATGGATGGGGGGAGAAACCAT CTGCAGCTGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAACTCTTATCTGGGAAAAGCCCAACAGATGAGTGCTTC ATGGGAGGCCTAAGTATAACAAAATGGGTGCAGTCAGGATTCAAAGACAAGACTGTTCAAGTCATTGATCCTCAGCTGCT ATCCCTCATTTTCTGTGATGAAGACCCTTCTGCTGCAGCTAAAGGTCCCAATATACAACTCCCTTGCTTGAATGCAATTA TAGGAGTTGGCCTATCCTGCACTGCAAACAACCCAGATGAACGCATTGGCATTAGAGATGTTGTTCGCCAACTAAAAGCT GCTAGAGATTCTCTTTCGAAAAATGATGCTGACATTGAAAGTCCTTCTAGTACTACTGCCAAGTGTTACTATGAAGTTTC AGTAAATTGAAGATTGGTGGTGGACACTGCATAATAAGGCGCATTTTCTACCATTTATTCTTAAATAAAGGTAGAGAAAC CCTCACCCCAAGCTAGCTTTTAGGATAGAGTTAGGCATAACCTAAATTCTAAAATGTCGTAGTTTCTTCCACTC
CDS sequence (LotjaGi4g1v0389600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGTTTTCACACTTTCTTCTTCATTTAGCCTTCTTAATCATTCTCCTCCCCCTTGATTTACAGAACCTTTTGGT TGGTGTATCATCAACCACTCTAAGCATCAGCTCAGACAGAGAAGCTTTGATCTCACTGAAGTCTCAGCTGAGTAATGACA TCAGTACTTCTCACCCACTTTTATCCTCTTGGAGCCAGAGCTCCTCTCCTTGTAATTGGACTGGTGTCCTCTGTGACAAG CGTGGCCAAAGAGTCACTGGCTTGGACCTTTCAGGCTTTGGTCTCTCAGGCCATTTAAGCCCCCATATTGGTAACCTGTC CTCTCTTCAGACCCTCCAGTTGCAGAATAACCAGCTATCAGGAGTGATTCCTGACCAAATTGGCAACCTATTCAGTTTGA GAGTTCTAAACATGAGCTCAAACATGTTGGAAGGAGTGCTTCCTTCAAACATCACCAAATTGGAGGAGCTCCAGATTCTT GATCTGTCCTCAAACAAGATCACCAGCAGGATTCCTGAAAACATTAGCAGCTTGAAAAAGCTGCAGGTCTTGAAACTTGG AAAGAACAGCCTCTATGGTGCAATCCCAACTTCTCTAGGGAACATTTCCACTCTCAAGAATATCAGTTTTGGCACCAACT CTCTCAGTGGCTGGATTCCCAGTGAGCTGGGCAGGCTTCATGATTTGATTGAGCTTGATCTCGTTCTCAACAATCTCAAT GGGACTGTTCCACCTGCTATATATAACCTGTCTTCCCTTGTTAACTTGGCCTTGGCTTCAAACTCCCTGTGGGGTGAGAT TCCTCAGGATGTTGGTCAGAAACTTCCAAAACTCCTAGTGTTCAATTTCTGCTTCAATAAGTTCACTGGTAGAATTCCAG GGTCTTTGCACAACCTCACCAACATTCGAGTCATTCGTATGGCTTCCAACTTTTTGGAAGGAACAGTGCCACCTGGTTTG GGAAATCTCCCATTTCTTCACATGTATAATATTGGGGGTAACAGGATTGTCAGCAACACAGGTCTGGATTTCATTACTTC TTTGGCAAACAGCACCCACCTGAACTTTCTGGCAATTGATGGCAATATGCTGGAAGGTGTGATTCCTGAAACCATTGGCA ATCTCTCCAAGGATCTCTCAATACTTTACATGGGACAGAATCGTTTCAATGGAAGCATACCCTCCTCCATTGGCCTTCTC AGTGGCTTAAAGTTGTTAAACTTGTGCTACAATTCATTCACTGGAGAAATCCCACAGGAGTTAGGCCAGTTAAAGAAACT ACAAGAGCTATCTCTGGCTGGAAATCAGATATCAGGTGAAATTCCAAATTCCCTTGGTAATCTCCATAAGTTGATCCAAA TTGATTTGTCAAGGAATAATCTTGTGGGTAGCATTCCCATCAGTTTTGGGAATTTTCAAAACCTGCTCTACCTGGACTTA TCCAACAACAAGCTCAATGAAAGCATACCTGTGGAAATCCTCAACCTCCCAACTTTGAGCAATGTTTTGAACTTGTCAAT GAACTTGTTGAGTGGACCAATACCACAAGTTGGGAAATTGATCAGTGTTTCCTCCATTGACTTTTCTAACAACCAGTTGA ATGGTAGCATCCCCAGCTCATTCAGCAGTTGCTTGAGCTTGGAAAAGTTGTTTTTGGCCAGGAATCTTCTTTCAGGTCCC ATTCCAAAAACTTTTGGAGATCTAAGAGCCTTGGAAACCTTGGACCTGTCCTCTAACAAACTCTCTGGGTCCATTCCTAT TGAACTTCAAAATCTTCATGTTCTTCAGCTTTTAAACCTCTCTTACAATGATTTAGATGGAACCATTCCAGTTTTCAAAA ATATCTCTGATGTTCACTTGGAAGGCAATAGAAATCTCTGCTATTCAACATGTGTGCCTCATGGCCATGGAAGAAGAAAT GCTAGGCTTTACATCATCATAGCAATCGCGGTAACATTGATACTATGTCTCACCACAATTGGTTTTTTGCTATACATAAA GAACAGCAAGGTGAAGGTAACAGCAGCAGAACCTGAACTGCTAAAGTCTCATCATGCTCCAATGGTCTCCTATGAAGAGC TTCGTTTAGCAACTGAAGAGTTCAGCCAGGAGAATTTAATAGGAGTTGGAAGCTTTGGCTCAGTGTATAAAGGCCATCTA AGTCATGGAAAAACTGTTGCTGTGAAAGTGCTTGACACTCTAAGAACTGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGA AACTATGAAGAACTCAAGGCATCGGAATCTGGTTAAGGTGATCACATCATGCTCCAGTCTTGACTTAAAACACAATGATT TTCTGGCTCTGGTGTATGAGTACTTGAGTAATGGGAGCTTGGATGATTGGATTAAGGGGATAAGAAAGCATGCAAGTGGA AATGGGTTGAGCCTCATGGAGAGACTGAATGTAGCTATTGATGTTGCTTGTGCATTGGATTATCTACACAATGATAGTGA AAATCCTATCGTGCATTGTGATTTGAAGCCCAGCAACATTCTCCTGGATGGAGACATGACTGCAAAAGTTGGAGACTTTG GATTGGCCAGGTTACTGATTCAAACATCAACTAATAGTCAAGTTTCCATTAGCTCAACTCATGTCCTCAGGGGTTCCATT GGTTACATACCTCCAGAGTATGGATGGGGGGAGAAACCATCTGCAGCTGGAGATGTATATAGTTTTGGGATAGTGTTACT AGAACTCTTATCTGGGAAAAGCCCAACAGATGAGTGCTTCATGGGAGGCCTAAGTATAACAAAATGGGTGCAGTCAGGAT TCAAAGACAAGACTGTTCAAGTCATTGATCCTCAGCTGCTATCCCTCATTTTCTGTGATGAAGACCCTTCTGCTGCAGCT AAAGGTCCCAATATACAACTCCCTTGCTTGAATGCAATTATAGGAGTTGGCCTATCCTGCACTGCAAACAACCCAGATGA ACGCATTGGCATTAGAGATGTTGTTCGCCAACTAAAAGCTGCTAGAGATTCTCTTTCGAAAAATGATGCTGACATTGAAA GTCCTTCTAGTACTACTGCCAAGTGTTACTATGAAGTTTCAGTAAATTGA
Protein sequence (LotjaGi4g1v0389600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALFSHFLLHLAFLIILLPLDLQNLLVGVSSTTLSISSDREALISLKSQLSNDISTSHPLLSSWSQSSSPCNWTGVLCDK RGQRVTGLDLSGFGLSGHLSPHIGNLSSLQTLQLQNNQLSGVIPDQIGNLFSLRVLNMSSNMLEGVLPSNITKLEELQIL DLSSNKITSRIPENISSLKKLQVLKLGKNSLYGAIPTSLGNISTLKNISFGTNSLSGWIPSELGRLHDLIELDLVLNNLN GTVPPAIYNLSSLVNLALASNSLWGEIPQDVGQKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMASNFLEGTVPPGL GNLPFLHMYNIGGNRIVSNTGLDFITSLANSTHLNFLAIDGNMLEGVIPETIGNLSKDLSILYMGQNRFNGSIPSSIGLL SGLKLLNLCYNSFTGEIPQELGQLKKLQELSLAGNQISGEIPNSLGNLHKLIQIDLSRNNLVGSIPISFGNFQNLLYLDL SNNKLNESIPVEILNLPTLSNVLNLSMNLLSGPIPQVGKLISVSSIDFSNNQLNGSIPSSFSSCLSLEKLFLARNLLSGP IPKTFGDLRALETLDLSSNKLSGSIPIELQNLHVLQLLNLSYNDLDGTIPVFKNISDVHLEGNRNLCYSTCVPHGHGRRN ARLYIIIAIAVTLILCLTTIGFLLYIKNSKVKVTAAEPELLKSHHAPMVSYEELRLATEEFSQENLIGVGSFGSVYKGHL SHGKTVAVKVLDTLRTGSLKSFFAECETMKNSRHRNLVKVITSCSSLDLKHNDFLALVYEYLSNGSLDDWIKGIRKHASG NGLSLMERLNVAIDVACALDYLHNDSENPIVHCDLKPSNILLDGDMTAKVGDFGLARLLIQTSTNSQVSISSTHVLRGSI GYIPPEYGWGEKPSAAGDVYSFGIVLLELLSGKSPTDECFMGGLSITKWVQSGFKDKTVQVIDPQLLSLIFCDEDPSAAA KGPNIQLPCLNAIIGVGLSCTANNPDERIGIRDVVRQLKAARDSLSKNDADIESPSSTTAKCYYEVSVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| PANTHER | 5 | 1004 | 1000 | 0.0 | – | |
| PANTHER | 5 | 1004 | 1000 | 0.0 | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Phobius | 23 | 642 | 620 | - | – | |
| Pfam | 37 | 79 | 43 | 3.5E-12 | ||
| Gene3D | 37 | 192 | 156 | 4.2E-46 | ||
| SUPERFAMILY | 37 | 339 | 303 | 4.31E-62 | – | |
| SMART | 106 | 130 | 25 | 7.3 | ||
| Pfam | 107 | 167 | 61 | 1.3E-9 | ||
| ProSiteProfiles | 108 | 130 | 23 | 5.941 | ||
| ProSiteProfiles | 132 | 153 | 22 | 5.587 | ||
| SMART | 154 | 177 | 24 | 1.5 | – | |
| SMART | 154 | 178 | 25 | 0.74 | ||
| ProSiteProfiles | 156 | 179 | 24 | 7.62 | ||
| SMART | 178 | 204 | 27 | 93.0 | – | |
| Gene3D | 193 | 275 | 83 | 2.0E-18 | ||
| SMART | 226 | 252 | 27 | 600.0 | – | |
| SMART | 250 | 274 | 25 | 93.0 | ||
| ProSiteProfiles | 252 | 274 | 23 | 4.555 | ||
| Gene3D | 276 | 339 | 64 | 3.6E-11 | ||
| SMART | 299 | 323 | 25 | 390.0 | ||
| ProSiteProfiles | 325 | 346 | 22 | 4.516 | ||
| Gene3D | 340 | 634 | 295 | 1.2E-85 | ||
| ProSiteProfiles | 378 | 400 | 23 | 4.994 | ||
| SUPERFAMILY | 379 | 628 | 250 | 2.62E-55 | – | |
| ProSiteProfiles | 402 | 424 | 23 | 4.77 | ||
| Pfam | 402 | 461 | 60 | 4.2E-7 | ||
| SMART | 424 | 448 | 25 | 14.0 | ||
| SMART | 424 | 450 | 27 | 13.0 | – | |
| ProSiteProfiles | 426 | 448 | 23 | 6.811 | ||
| SMART | 472 | 496 | 25 | 15.0 | ||
| SMART | 472 | 498 | 27 | 650.0 | – | |
| ProSiteProfiles | 474 | 495 | 22 | 7.204 | ||
| PRINTS | 475 | 488 | 14 | 1.5E-5 | – | |
| SMART | 520 | 544 | 25 | 400.0 | ||
| ProSiteProfiles | 522 | 544 | 23 | 4.516 | ||
| Pfam | 546 | 605 | 60 | 7.4E-10 | ||
| SMART | 568 | 591 | 24 | 35.0 | ||
| SMART | 568 | 589 | 22 | 81.0 | – | |
| PRINTS | 568 | 581 | 14 | 1.5E-5 | – | |
| ProSiteProfiles | 570 | 593 | 24 | 7.142 | ||
| SMART | 592 | 614 | 23 | 200.0 | ||
| ProSiteProfiles | 594 | 616 | 23 | 5.386 | ||
| Phobius | 643 | 666 | 24 | - | – | |
| TMHMM | 644 | 666 | 23 | - | – | |
| Phobius | 667 | 1029 | 363 | - | – | |
| Gene3D | 671 | 781 | 111 | 9.1E-25 | – | |
| SUPERFAMILY | 682 | 998 | 317 | 1.75E-72 | ||
| SMART | 701 | 1006 | 306 | 6.0E-40 | ||
| ProSiteProfiles | 701 | 1005 | 305 | 35.962 | ||
| Pfam | 702 | 917 | 216 | 7.5E-41 | ||
| ProSitePatterns | 707 | 729 | 23 | - | ||
| CDD | 707 | 999 | 293 | 1.06436E-87 | – | |
| Gene3D | 782 | 1022 | 241 | 6.9E-55 | – | |
| ProSitePatterns | 830 | 842 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0389600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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