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LotjaGi4g1v0439700.1

Overview

Field Value
Gene ID LotjaGi4g1v0439700
Transcript ID LotjaGi4g1v0439700.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description ATP-dependent RNA helicase family protein; TAIR: AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp|Q9ZVW2|HEN2_ARATH DExH-box ATP-dependent RNA helicase DExH10; TrEMBL-Plants: tr|I1KPQ5|I1KPQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:81337700..81346166) extracted from Lotus japonicus Gifu genome v1.2.

CTATTCCAGCCACCAGGCCTGCAACCAAGTAACCTCCAACCCAAATCACCGCAGACACTGAAAAAAATTTCGCCACCACA GAAAAATTAGGGTTTCGGCCTCAAATCAAAACCAAATCTCACTGCAATTTACGCGCTCTCTCTCTCTCTCTCTCTTCCAC CTTCAACCTCAGAAGAGGGTTTTAGGGGTTTTCGAACCACTGTTGCAGCAAGCACTAGCAGCTGAGGAAGAAAATGGAGA AGGAATCTTCAACACTCGGAAAGCGAAGAGAATCTGAGCTCAACAGCGACACTCCAAATCCAATCCCAAAGAAACCTCGC AGCAGAGAACGAACATGCGTCCACGAGGTCGCAGTTTCGAGCGGTTACCTCGCCACGAAGGAGGAAGCAATTCACGGCAC TCTCTCCAACCCTCAGTACAACGGTCCAATGGCGAAGTCGTACCCCTTCACCCTCGACCCGTTCCAGCAGGTTTCCATTT CCTGCCTGGAACGAAACGAGTCGGTTTTGGTCTCCGCGCATACCTCCGCCGGGAAAACTGCGGTGGCGGAGTACGCCATT GCAATGTCGTTTCGGGATAAGCAGAGGGTTATCTATACTTCGCCGTTGAAGGCGCTGAGTAACCAGAAGTACAGGGAGCT CAGCCAGGAGTTCAAGGATGTAGGGTTGATGACCGGAGACGTCACGCTCTCGCCGCACGCGACGTGTCTTGTAATGACCA CGGAGATTCTCAGGGGAATGCTGTATCGTGGCTCTGAGGTGTTGAAGGAGGTTGCTTGGGTTATCTTCGACGAGATTCAC TATATGAAGGATCGAGAGAGGGGTGTTGTTTGGGAAGAGAGTATTATCTTTCTGCCGCCTGCTATCAAAATGGTTTTCCT CTCTGCTACCATGTCCAATGCCACTGAGTTTGCAGAGTGGATTTGTAACATTCACAAGCAGCCTTGTCATGTGGTGTACA CTGATTTTCGCCCCACCCCTTTGCAGCACTATGTTTTCCCCATTGGTGGGAATGGGTTGTATTTGGTTGTTGATGAGAAT GAGCAGTTCAGGGAGGACAATTTCATGAAGCTGCAGGATACTTTCTCCAAGCAGAAGGTTGGTGATAGCGGCAGGGGTGC TAAGTCCAATGGCAGGTTCAGCAAAGGTGGCTCTGGTTCTGGTGGTTCTGACATTTTCAAAATTGTTAAGGTCAGCTCTC AGCTATTCCTTGTGTTGTTATCGATCGGACGAGAATTTTTCGTTCAACATGTGGACTATAAATATATATATTTTAGATCT AGGGCTATGAATACTTCTGTTGTGTTTTCGATAGTTTTTTATTTTATTTCTCTGTTATCAACTTATTTTGTTGAGGATCT TGTTCCGTTAAATCATAGTGATGGGAAGATGACTTAGTATTTTGTTAGCAGAGGCTACAGGTTTCTGTTTGTTAATGTCA TGACATATTTGCACTTTCTTAAGTTGATATTGTCATAAGTGGGGTTCTTGTTGAGCTCGTAGTTGAATGAAATTTGTAGG CAATATAATTTTCTTCTGCTCTGTCTGGTCTTCAAAATCCACATCTACATTAAGTACATTTTGTATATGAAGAGTCTAGT TTTATTAGCTAAATTGAAATAACCTTTTCCCCTGGTTGCCAAATGGGCAAATTTAGAAAATTTTATACTTTTCTGTTTGA AGCAGGCAAATATGTGTTAAAGCTGCCATCAATTCTTTAAATTTGTTCTTTAAGATGGAAATCCTGAATTTTTGAGTCAT GGAATAGAAGGTTTTGTCTTGGGCAGGTTAATAAGCAGTAGAGCATCTACTCTATATTGTAAAAAAACTTAAATTAGTAT GTGGACCTAATATAATTAATTGCTGAGTTTTTGATGGATTACATCCTTCTTAGCAAAGGGGAAAAGAAGGAAAAAGAGGA AACCGATAATAAACACATCAAAACCACAAAGCCCTCCTAATTAGTGCCATGACATGCTACAGTGATTAGGTGGCCATTTA AGCCATTTATTTCTTGCATTTGTGAGAGTATCTAATCAAATCAGCAGTTGCTTTGGGATAAGATTAGATGTTTGCCTTTA ATATGGGTATGGCACCTGATTTTTTTGAAGGAGTGTCCTTTAAGATATGTTGACGAATTGGTTTGCTTTACTACATTGAT GTCTATGGTTTTTTGGTGTGTACTTTTACTTTTCTCTTTTTTATTGATACAGCGGAAGTCGTACTAGGATTGCAAGCGCA AATCCTAAAAGAAAAGGGTTTCTGGAATCCACCAGAAAAGAAGAGAAAACTCTGGAATTTTATTATTAATCAAAAAGCTG AATAGGCTATGCCTTACAAGTGCTTAAATAGGAAAAGAAAATATCCTAATAGAAAAATAAATAATATCCTAAAAGATCCT AATTGAAAATAAATAAGTTCCTAAGCAAAAATAAACAAGATCCTAAAAGATCCTAATTGAAAATTAATAAAATCCTAATA AAATACTTAATTTTGTTTTGCGGGCCTGATACGGATTCAGATAGGCTAAAATCCGACCGGGCTCATCCGACGAGCGACGT CATCGTCGAAGCGCGCAGCCAGCCGCGCTACATCATTTATGGACGACTTATTTCCTGTTTACTTTTACTTGTGTGTGTGT GTGTGTATTGCTTTTTAGTTGAGTTAGAGTGTTTCCTGTTTTTCAGATGATCATGGAAAGGAAATTCCAACCTGTTATCA TCTTTAGCTTCAGTAGAAGAGAGTGTGAGCAGCACGCAATGTCTATGTCCAAGCTTGACTTCAATACCGACGATGAAAAG GATACAGTGGAACATATTTTTCGTAATGCAGTGCTCTGTTTGAATGAAGAAGATAGGAGCTTGCCTGCTATTGAGCTGAT GTTGCCACTTCTTCAGCGAGGAATTGCTGTCCATCATTCTGGCCTTCTTCCTGTTATCAAAGAATTGGTTGAACTTCTTT TCCAAGAAGGTCTTGTAAAGGCCCTCTTCGCTACTGAGACTGTAAGAATTTGTCCACCTTCTGATTTCTTTCCCTGTACA TTATTTTCTGATACTATTTTAGAATGAGACTCTGATGCACTTTTCTATAGTTCGCAATGGGTTTGAATATGCCAGCAAAA ACTGTTGTTTTCACTTCTGTTAAGAAATGGGATGGTGATAGTCACCGTTATATTGGATCTGGTGAATATATACAGGTGCG TGATGATTTATTTTTTTGGATGATGGTGATTATTTATTCATTCCTATCAAGATATTACCGTGCTGACTTTACTATTATCA ATATGCCACCTTTAGATGAGTGGAAGGGCCGGGCGCCGTGGCAAAGATGAGCGTGGAATTTGTATCATTATGATTGATGA GCAGGTGAGTGTTGAGGCTAGTGTATTTGGTTTTCTGTTGCTTCAATTTATGAACATCCGGTCATATTACTTTCCTCAAC TGATCTTATCTTTTCATCCACCCTGTGAATTGCCCATTCTTTATTTAGCCTTGTGGGTCTGGGATCTTTTGATGCAGTAA TTCATTCATAACTGCTCACATTACGCTGAGTAATATGTTTACGTCCTGCAACATATTGAGATCATATACGCGCATGCTTT TGTTGGTTTCAATCGTATGACGGGGGTACTAGTATACTGCTCTATCATCTGAATATTATGTTTGCATTCTGTTCTTAGCT ATATAACAAATTCTCTTCTTGGATTTTAGGCAGAAACTTGAATGATAATTGGTTTTGCATTGATCAACCCGGCACTTATC TGATTATTTTGTGCAGATGGAAATGAATAACCTCAAGGACATGGTTCTGGGTAAACCTGCTCCTTTAGTTAGTACATTCA GGCTTAGCTACTACTCAATTTTAAATTTGATGAGCCGTGCAGAAGGCCAGTTCACTGCCGAACATGTAATAAAGAATTCA TTTCATCAATTTCAATATGAAAAGGTTTGTACTGATCCATTTCCTTCAAAATCTTATTAGCTTATGTTGCACTATGGTGT TTAACTCATGGGCACCTTACTCTTGTTCAGGCCTTACCTGATATGGGAGAAAGGGTGTCAAAGTTGGAGCAGGAAGTAGC CTTACTCGATGCTTCAGGGGAGGTAATCTTTGTTCCTTTGCCATCAGTTTAGATTTCTTCATTATGTATTCTATGTTGTA TTAATATATTGATATTTGATTTAATACAAGTAATTACTTATGTAGGCCGAGGTATCTGAATATCATAAGCTAAAACTGGA AATAGCACAGCTTGAGAAGAAGATGATGGCACAAATTATAAGGCCTGAAATGATTCTTTATTTTCTTGTCCCTGGTCGAT TGGTAAGTAATAGTAGGCATCAGCTTGGAAATGCATTTGAATTATTTTTTCCCTTCTCTAATTAATCCTGAGAGTCAGTA TTAAATGAGTTTATGATATCATTGATGCATGAATATATATTAATAAATGTCAGGTATTTGTTAAGTTTTTTTATCCCTCT TGTGCCTTTGCTTGCAGTTGTTCATTTAAGGTTCTTCTGTTCTTAATTTGTCTTCTGCTGCTACTTTTTCCAGCACATTT AACTGAGATAGATGAATTTTTTTAACCTTGCAGATCAAAGTAAGAGAAGGTGCAACTGATTGGGGTTGGGGTGTTGTAGT CAATGTTGTTAAGAAACCTTCTGGTGGTGGTTATATAGTTGATACTTTACTACATTGTTCACCTGGCTCAAATGAAAACA GTTCACGACCAAAACCATGTCCGCCGCGGCCTGGAGAGAAAGGTGAAATGCATGTGGTAAGCTGACATCCCAAACAATTT TGCTACTTTTTGATGGCTCTCTATTGTAACTCCCTCCACATATCTGAAAAATTTCTATTACTTTCTTTTGATTGCTTCCT TTTGCAATAGGTCCCTGTTCAATTACCATTGATATCTTGTCTTAGTAAACTGAGGATATATATTCCTCCTGATCTTCGAC CCTTGGAGGCAAGGCAAAGTACACTCCTTGCTGTACAGGATATGGGCAACCGTTTCCCTCAAGGTATTCCAAAGCTTAAC CCTGTGAAGGTAATTATTTTCCAATCTCAACCTTGAATGCCTTTTCTGTATCATATCCACTTCTCTTCATTGTTGTTCAT CTTATGACTTTTCCATCTCATCCTCCTTCTTTAGTGGAGAAGATTCTTTAACACATGGTCATATTGAACTTGAGTGATCT TTAACAGAATCACAACATTATATATACATAATATTCTCTAAAATAAATTTCCAGGACATGGATGTTAAAGATCCAGAAAT AGTTGAACTTGTCAATCAGATAGAGGAACTTGAGAAAAAGTTGTTTGCTCATCCTATGCATAAGGTTTGTTAAAATGAAC TCTGGCCCCTATTTTGTATCTTATAGATGTAACATTGCTTGCTCTTTGGTTTGAATCTTTCCTTAATATTTTGCTGTAAC ATAGCATCAAAATGTGGATCAAATTAAAAGCTTTGAGAGGAAAGCAGAAGTGAATCATGAAATCCAGCAACTGAAGACAA AAATGCGGGATTCTCAGGTATTTCATTGCCCAGGCTTCGTTATTTGCTAAATTTTATTATTAAACCACATGATAGTATCT GCTATGCATTATATTTGTGCCCATGTGAATGAACAATTTAACATTGCATGAGATGTTAATATGTCAATATTATTAATGAC AAATTTTGAGTTCACTACTGTGGAATGATGACAATGATAACTGTATTCCTTTATATAATTTCCTAAACTATGGTATGGAT TCATTAGTAACTGAAAAACATGCATAAATTTTTCAGCTACAAAAATTTCGCGAAGAACTGAAGAATCGCTCACGAGTTTT AAAGAAGCTAGGTCATATTGATGCTGACGGTGTAGTTCAGTTGAAGGGACGGGCAGCCTGCTTGATTGACACAGGCGATG AACTCCTTGTCACCGAATTAATGTTCAACGGTGATTCAATATGCATTTCATTTTCTGCATAGTGCTTTCTGTAAAGCCTA CTGCATAATATGTAACTATTTTTCTTCTTCTTTTTTTCCATGCTCCCAATAGGTACTTTTAATGATTTAGACCATCATCA AGTGGCTGCCCTTGCAAGTTGTTTTATACCAGGAGATAAGTCGAATGAGCAGATACAACTGAGAACCGAGCTTGCGAGAC CACTACAACAGCTTCAAGACAGTGCAAGAAGGATAGCAGAGGTGTTTTATTATTTAACTTTGTATTTCTTGAGAATCTGT GAATTAAATTATAAGTGGGATCACTCCATGGTCACAGATACAACATGAATGCAAATTGGATATAAATGTGAATGAGTACG TGGAATCAACAGCAAGGCCATACTTGATGGATGTGATATACTCTTGGTCAAAGGTTAGTTATATATTTCTTCAGCTTGAG CGTGTTATCTACTTGTAAGTCATTTGCTCGATTTCTGCCAATGTAGTCAAAGTCTAAATTTTACCATGAATTGGGAAGGG GAATGAAAATCTTAGATTATCAAAATTGTAACATGAATTGTAAGATTTCATATATATATATATACATGTGTGTGTGTGTC TAGCATGAATAAGAAAAAACCCATTAAATCACTAAAAACACGTTATAAACTCACATTCATAATCAACAACCGACACAAGA AGGGTCTTGGACTTGATTGAACAAAGCAACACTGATTTACAGGTTTTCAAAGTTTATATTAATCTCTCGTCTTTCATTTC AAATTTGTCTTCCAGGGTGCAAATTTTTCGGATGTTATACAAATGACTGACATCTTTGAGGGAAGTATCATTAGGAGTGC TAGAAGGCTTGACGAGTTTCTGAATCAGGTATCCAAGTATCCACCCTCTAACTGTCAAACATGTGGTCCCATTTTTTTAT GTTAACTTTCTTAAAACTCGTGTCTTGCTAATAGCCCATTCACTAAGAAGTGGAAAAGGGCAAGAAAATGTGGTTAAGGT GGGGTTGGTGGAACATGGCTCAATAAGTGTGCTATTCTGGATAGTTACTAGTTCACACAGTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTATCTACATTACATATGGAACATTTGATATATGCTTGAAGTTTGTGGTGTACTTGCCATAAAAGC AGAAGGGATTTTCCCTGAGGGAAATCAGACATAGTTTACTTGATTATTGCATCTGAGTATGTTTTAGCAGTTCTTGAAAT TCATTTACCTCTGTTATTATTTTGGGACAAATGAAATTCATAGTTTCCCATCTATGTTCTTCAAGTATTGCAAAATATTC AGATTTTACCTTTAGAAGCTTATACCATAAATATCAGTAGGCTTGACTATTTTCCAAGTCATCTCTACGAAACATTTTCT GTCTATTTTATTGTTTGGAAACCAAAAGCATGTTTGCATTGACATTATGGATTTTTGGAGTTCTGATTGTCTTGCCTCTT TCCAGTTGCGTGCTGCTGCTAATGCAGTAGGAGAGGTTGACTTGGAGAAAAAATTTGCAGCAGCAAGTGAAAGCCTTCGA AGAGGTATTATGTTTGCAAATTCTCTGTATCTGTGACTTGTTTCCCTGCAGGCCATTCCCTATATTCATGGCTTTTCTGG GAGGCAGAAAGCTTTTATCTTCACATCCAACTTTCTGGGTGCGCCTAATTCCTTCTCTGGTAAATATTTTCGTTCAATTA TGATGCACACTGTATACAGTCACTGATAGTAAAAGGAGTGGTCGTAGAGTGATAGAAAAATCCAGTCAATAGAAGGTGTA ATTTATTAAGATTGTGACATCTTGTATCCATCTAGTTCAGAGTAGTAGCATGTTTCTCCTTTAAGTCATTCTTCAGAACC CCTTGTCTGCATCATGGCTTGGGGAGTGGGATGGCGAAGAAAGTAGTGTAAGCATAGTCATCAATTTGCAGATGAGTCAT TGTTGCCTGTAAAAACTGCTATTTCAAATTTTGATTGAGAGACCATCATTTTAGTGACTATTTGAATAATAGGATCGATT GAACTGAGAAGATTCTCCTACTTATATATATTTTGTTTTCATTTGAATTTGATTAAGTGGTCATGGGTTGAAATGATTCG CTTATTGTCATGTGATCCTAATTCTCTACATGCTTACATTTGTGCTGTTAAGTTATTATATACAAGATCCTAATTCTAGA CATTCTTCGTTTATAAAATTAAAAAAAAGCTAACATGTTCTAAGAAAAATATGGTTTTTGCACACCTGTTTTTCATCGTA ATCGCTACAAGTGGTTATATTTGATAAATTAAGAAACAAATTGGTTTCTGCATCTTTTTCTATTTACACACTCCAATTGC TTGGAAATTAAAAAATTACGTCTCTGTTTGAAGAGTTTCCATGTTGAGAGACGTTAGATAGAGATGGTCAATCTTCCCTC CTTTGGTGGAAGTTGAAGTGTGGGAGATCTTTAAGCGGTTCCTGCAAACCAACAAAAAACATCCGAC
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0439700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAAGGAATCTTCAACACTCGGAAAGCGAAGAGAATCTGAGCTCAACAGCGACACTCCAAATCCAATCCCAAAGAA ACCTCGCAGCAGAGAACGAACATGCGTCCACGAGGTCGCAGTTTCGAGCGGTTACCTCGCCACGAAGGAGGAAGCAATTC ACGGCACTCTCTCCAACCCTCAGTACAACGGTCCAATGGCGAAGTCGTACCCCTTCACCCTCGACCCGTTCCAGCAGGTT TCCATTTCCTGCCTGGAACGAAACGAGTCGGTTTTGGTCTCCGCGCATACCTCCGCCGGGAAAACTGCGGTGGCGGAGTA CGCCATTGCAATGTCGTTTCGGGATAAGCAGAGGGTTATCTATACTTCGCCGTTGAAGGCGCTGAGTAACCAGAAGTACA GGGAGCTCAGCCAGGAGTTCAAGGATGTAGGGTTGATGACCGGAGACGTCACGCTCTCGCCGCACGCGACGTGTCTTGTA ATGACCACGGAGATTCTCAGGGGAATGCTGTATCGTGGCTCTGAGGTGTTGAAGGAGGTTGCTTGGGTTATCTTCGACGA GATTCACTATATGAAGGATCGAGAGAGGGGTGTTGTTTGGGAAGAGAGTATTATCTTTCTGCCGCCTGCTATCAAAATGG TTTTCCTCTCTGCTACCATGTCCAATGCCACTGAGTTTGCAGAGTGGATTTGTAACATTCACAAGCAGCCTTGTCATGTG GTGTACACTGATTTTCGCCCCACCCCTTTGCAGCACTATGTTTTCCCCATTGGTGGGAATGGGTTGTATTTGGTTGTTGA TGAGAATGAGCAGTTCAGGGAGGACAATTTCATGAAGCTGCAGGATACTTTCTCCAAGCAGAAGGTTGGTGATAGCGGCA GGGGTGCTAAGTCCAATGGCAGGTTCAGCAAAGGTGGCTCTGGTTCTGGTGGTTCTGACATTTTCAAAATTGTTAAGATG ATCATGGAAAGGAAATTCCAACCTGTTATCATCTTTAGCTTCAGTAGAAGAGAGTGTGAGCAGCACGCAATGTCTATGTC CAAGCTTGACTTCAATACCGACGATGAAAAGGATACAGTGGAACATATTTTTCGTAATGCAGTGCTCTGTTTGAATGAAG AAGATAGGAGCTTGCCTGCTATTGAGCTGATGTTGCCACTTCTTCAGCGAGGAATTGCTGTCCATCATTCTGGCCTTCTT CCTGTTATCAAAGAATTGGTTGAACTTCTTTTCCAAGAAGGTCTTGTAAAGGCCCTCTTCGCTACTGAGACTTTCGCAAT GGGTTTGAATATGCCAGCAAAAACTGTTGTTTTCACTTCTGTTAAGAAATGGGATGGTGATAGTCACCGTTATATTGGAT CTGGTGAATATATACAGATGAGTGGAAGGGCCGGGCGCCGTGGCAAAGATGAGCGTGGAATTTGTATCATTATGATTGAT GAGCAGATGGAAATGAATAACCTCAAGGACATGGTTCTGGGTAAACCTGCTCCTTTAGTTAGTACATTCAGGCTTAGCTA CTACTCAATTTTAAATTTGATGAGCCGTGCAGAAGGCCAGTTCACTGCCGAACATGTAATAAAGAATTCATTTCATCAAT TTCAATATGAAAAGGCCTTACCTGATATGGGAGAAAGGGTGTCAAAGTTGGAGCAGGAAGTAGCCTTACTCGATGCTTCA GGGGAGGCCGAGGTATCTGAATATCATAAGCTAAAACTGGAAATAGCACAGCTTGAGAAGAAGATGATGGCACAAATTAT AAGGCCTGAAATGATTCTTTATTTTCTTGTCCCTGGTCGATTGATCAAAGTAAGAGAAGGTGCAACTGATTGGGGTTGGG GTGTTGTAGTCAATGTTGTTAAGAAACCTTCTGGTGGTGGTTATATAGTTGATACTTTACTACATTGTTCACCTGGCTCA AATGAAAACAGTTCACGACCAAAACCATGTCCGCCGCGGCCTGGAGAGAAAGGTGAAATGCATGTGGTCCCTGTTCAATT ACCATTGATATCTTGTCTTAGTAAACTGAGGATATATATTCCTCCTGATCTTCGACCCTTGGAGGCAAGGCAAAGTACAC TCCTTGCTGTACAGGATATGGGCAACCGTTTCCCTCAAGGTATTCCAAAGCTTAACCCTGTGAAGGACATGGATGTTAAA GATCCAGAAATAGTTGAACTTGTCAATCAGATAGAGGAACTTGAGAAAAAGTTGTTTGCTCATCCTATGCATAAGCATCA AAATGTGGATCAAATTAAAAGCTTTGAGAGGAAAGCAGAAGTGAATCATGAAATCCAGCAACTGAAGACAAAAATGCGGG ATTCTCAGCTACAAAAATTTCGCGAAGAACTGAAGAATCGCTCACGAGTTTTAAAGAAGCTAGGTCATATTGATGCTGAC GGTGTAGTTCAGTTGAAGGGACGGGCAGCCTGCTTGATTGACACAGGCGATGAACTCCTTGTCACCGAATTAATGTTCAA CGGTACTTTTAATGATTTAGACCATCATCAAGTGGCTGCCCTTGCAAGTTGTTTTATACCAGGAGATAAGTCGAATGAGC AGATACAACTGAGAACCGAGCTTGCGAGACCACTACAACAGCTTCAAGACAGTGCAAGAAGGATAGCAGAGATACAACAT GAATGCAAATTGGATATAAATGTGAATGAGTACGTGGAATCAACAGCAAGGCCATACTTGATGGATGTGATATACTCTTG GTCAAAGGGTGCAAATTTTTCGGATGTTATACAAATGACTGACATCTTTGAGGGAAGTATCATTAGGAGTGCTAGAAGGC TTGACGAGTTTCTGAATCAGTTGCGTGCTGCTGCTAATGCAGTAGGAGAGGTTGACTTGGAGAAAAAATTTGCAGCAGCA AGTGAAAGCCTTCGAAGAGGTATTATGTTTGCAAATTCTCTGTATCTGTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0439700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEKESSTLGKRRESELNSDTPNPIPKKPRSRERTCVHEVAVSSGYLATKEEAIHGTLSNPQYNGPMAKSYPFTLDPFQQV SISCLERNESVLVSAHTSAGKTAVAEYAIAMSFRDKQRVIYTSPLKALSNQKYRELSQEFKDVGLMTGDVTLSPHATCLV MTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCHV VYTDFRPTPLQHYVFPIGGNGLYLVVDENEQFREDNFMKLQDTFSKQKVGDSGRGAKSNGRFSKGGSGSGGSDIFKIVKM IMERKFQPVIIFSFSRRECEQHAMSMSKLDFNTDDEKDTVEHIFRNAVLCLNEEDRSLPAIELMLPLLQRGIAVHHSGLL PVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMID EQMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDMGERVSKLEQEVALLDAS GEAEVSEYHKLKLEIAQLEKKMMAQIIRPEMILYFLVPGRLIKVREGATDWGWGVVVNVVKKPSGGGYIVDTLLHCSPGS NENSSRPKPCPPRPGEKGEMHVVPVQLPLISCLSKLRIYIPPDLRPLEARQSTLLAVQDMGNRFPQGIPKLNPVKDMDVK DPEIVELVNQIEELEKKLFAHPMHKHQNVDQIKSFERKAEVNHEIQQLKTKMRDSQLQKFREELKNRSRVLKKLGHIDAD GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQH ECKLDINVNEYVESTARPYLMDVIYSWSKGANFSDVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEVDLEKKFAAA SESLRRGIMFANSLYL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 34 34 - –
MobiDBLite
mobidb-lite
1 17 17 - –
PIRSF
PIRSF005198
2 976 975 0.0
IPR016438
PANTHER
PTHR12131:SF13
5 976 972 0.0 –
PANTHER
PTHR12131
5 976 972 0.0 –
CDD
cd18024
35 246 212 1.22338E-147 –
Gene3D
G3DSA:3.40.50.300
45 246 202 2.2E-78 –
SMART
SM00487
70 253 184 4.1E-35
IPR014001
Pfam
PF00270
76 222 147 2.3E-18
IPR011545
ProSiteProfiles
PS51192
82 238 157 24.844
IPR014001
SUPERFAMILY
SSF52540
85 482 398 8.42E-47
IPR027417
CDD
cd18795
246 480 235 1.21807E-60 –
Gene3D
G3DSA:3.40.50.300
247 500 254 2.0E-83 –
MobiDBLite
mobidb-lite
287 309 23 - –
ProSiteProfiles
PS51194
313 514 202 12.944
IPR001650
Pfam
PF00271
367 468 102 9.1E-7
IPR001650
SMART
SM00490
379 468 90 1.0E-16
IPR001650
Gene3D
G3DSA:1.10.3380.30
507 966 460 6.4E-148 –
Pfam
PF13234
524 773 250 2.8E-69
IPR025696
Gene3D
G3DSA:1.20.1500.20
531 774 244 6.4E-148 –
Coils
Coil
568 588 21 - –
CDD
cd13154
595 712 118 2.80508E-45 –
Gene3D
G3DSA:2.40.30.300
597 707 111 6.4E-148 –
Coils
Coil
758 778 21 - –
SMART
SM01142
798 976 179 2.6E-83
IPR012961
Pfam
PF08148
801 971 171 8.9E-48
IPR012961

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0003724
Molecular function RNA helicase activity Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a RNA helix.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006401
Biological process RNA catabolic process The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0439700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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