Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0439700 |
| Transcript ID | LotjaGi4g1v0439700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase family protein; TAIR: AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp|Q9ZVW2|HEN2_ARATH DExH-box ATP-dependent RNA helicase DExH10; TrEMBL-Plants: tr|I1KPQ5|I1KPQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81338415..81345976) extracted from Lotus japonicus Gifu genome v1.2.
TTCGAACCACTGTTGCAGCAAGCACTAGCAGCTGAGGAAGAAAATGGAGAAGGAATCTTCAACACTCGGAAAGCGAAGAG AATCTGAGCTCAACAGCGACACTCCAAATCCAATCCCAAAGAAACCTCGCAGCAGAGAACGAACATGCGTCCACGAGGTC GCAGTTTCGAGCGGTTACCTCGCCACGAAGGAGGAAGCAATTCACGGCACTCTCTCCAACCCTCAGTACAACGGTCCAAT GGCGAAGTCGTACCCCTTCACCCTCGACCCGTTCCAGCAGGTTTCCATTTCCTGCCTGGAACGAAACGAGTCGGTTTTGG TCTCCGCGCATACCTCCGCCGGGAAAACTGCGGTGGCGGAGTACGCCATTGCAATGTCGTTTCGGGATAAGCAGAGGGTT ATCTATACTTCGCCGTTGAAGGCGCTGAGTAACCAGAAGTACAGGGAGCTCAGCCAGGAGTTCAAGGATGTAGGGTTGAT GACCGGAGACGTCACGCTCTCGCCGCACGCGACGTGTCTTGTAATGACCACGGAGATTCTCAGGGGAATGCTGTATCGTG GCTCTGAGGTGTTGAAGGAGGTTGCTTGGGTTATCTTCGACGAGATTCACTATATGAAGGATCGAGAGAGGGGTGTTGTT TGGGAAGAGAGTATTATCTTTCTGCCGCCTGCTATCAAAATGGTTTTCCTCTCTGCTACCATGTCCAATGCCACTGAGTT TGCAGAGTGGATTTGTAACATTCACAAGCAGCCTTGTCATGTGGTGTACACTGATTTTCGCCCCACCCCTTTGCAGCACT ATGTTTTCCCCATTGGTGGGAATGGGTTGTATTTGGTTGTTGATGAGAATGAGCAGTTCAGGGAGGACAATTTCATGAAG CTGCAGGATACTTTCTCCAAGCAGAAGGTTGGTGATAGCGGCAGGGGTGCTAAGTCCAATGGCAGGTTCAGCAAAGGTGG CTCTGGTTCTGGTGGTTCTGACATTTTCAAAATTGTTAAGGTCAGCTCTCAGCTATTCCTTGTGTTGTTATCGATCGGAC GAGAATTTTTCGTTCAACATGTGGACTATAAATATATATATTTTAGATCTAGGGCTATGAATACTTCTGTTGTGTTTTCG ATAGTTTTTTATTTTATTTCTCTGTTATCAACTTATTTTGTTGAGGATCTTGTTCCGTTAAATCATAGTGATGGGAAGAT GACTTAGTATTTTGTTAGCAGAGGCTACAGGTTTCTGTTTGTTAATGTCATGACATATTTGCACTTTCTTAAGTTGATAT TGTCATAAGTGGGGTTCTTGTTGAGCTCGTAGTTGAATGAAATTTGTAGGCAATATAATTTTCTTCTGCTCTGTCTGGTC TTCAAAATCCACATCTACATTAAGTACATTTTGTATATGAAGAGTCTAGTTTTATTAGCTAAATTGAAATAACCTTTTCC CCTGGTTGCCAAATGGGCAAATTTAGAAAATTTTATACTTTTCTGTTTGAAGCAGGCAAATATGTGTTAAAGCTGCCATC AATTCTTTAAATTTGTTCTTTAAGATGGAAATCCTGAATTTTTGAGTCATGGAATAGAAGGTTTTGTCTTGGGCAGGTTA ATAAGCAGTAGAGCATCTACTCTATATTGTAAAAAAACTTAAATTAGTATGTGGACCTAATATAATTAATTGCTGAGTTT TTGATGGATTACATCCTTCTTAGCAAAGGGGAAAAGAAGGAAAAAGAGGAAACCGATAATAAACACATCAAAACCACAAA GCCCTCCTAATTAGTGCCATGACATGCTACAGTGATTAGGTGGCCATTTAAGCCATTTATTTCTTGCATTTGTGAGAGTA TCTAATCAAATCAGCAGTTGCTTTGGGATAAGATTAGATGTTTGCCTTTAATATGGGTATGGCACCTGATTTTTTTGAAG GAGTGTCCTTTAAGATATGTTGACGAATTGGTTTGCTTTACTACATTGATGTCTATGGTTTTTTGGTGTGTACTTTTACT TTTCTCTTTTTTATTGATACAGCGGAAGTCGTACTAGGATTGCAAGCGCAAATCCTAAAAGAAAAGGGTTTCTGGAATCC ACCAGAAAAGAAGAGAAAACTCTGGAATTTTATTATTAATCAAAAAGCTGAATAGGCTATGCCTTACAAGTGCTTAAATA GGAAAAGAAAATATCCTAATAGAAAAATAAATAATATCCTAAAAGATCCTAATTGAAAATAAATAAGTTCCTAAGCAAAA ATAAACAAGATCCTAAAAGATCCTAATTGAAAATTAATAAAATCCTAATAAAATACTTAATTTTGTTTTGCGGGCCTGAT ACGGATTCAGATAGGCTAAAATCCGACCGGGCTCATCCGACGAGCGACGTCATCGTCGAAGCGCGCAGCCAGCCGCGCTA CATCATTTATGGACGACTTATTTCCTGTTTACTTTTACTTGTGTGTGTGTGTGTGTATTGCTTTTTAGTTGAGTTAGAGT GTTTCCTGTTTTTCAGATGATCATGGAAAGGAAATTCCAACCTGTTATCATCTTTAGCTTCAGTAGAAGAGAGTGTGAGC AGCACGCAATGTCTATGTCCAAGCTTGACTTCAATACCGACGATGAAAAGGATACAGTGGAACATATTTTTCGTAATGCA GTGCTCTGTTTGAATGAAGAAGATAGGAGCTTGCCTGCTATTGAGCTGATGTTGCCACTTCTTCAGCGAGGAATTGCTGT CCATCATTCTGGCCTTCTTCCTGTTATCAAAGAATTGGTTGAACTTCTTTTCCAAGAAGGTCTTGTAAAGGCCCTCTTCG CTACTGAGACTGTAAGAATTTGTCCACCTTCTGATTTCTTTCCCTGTACATTATTTTCTGATACTATTTTAGAATGAGAC TCTGATGCACTTTTCTATAGTTCGCAATGGGTTTGAATATGCCAGCAAAAACTGTTGTTTTCACTTCTGTTAAGAAATGG GATGGTGATAGTCACCGTTATATTGGATCTGGTGAATATATACAGGTGCGTGATGATTTATTTTTTTGGATGATGGTGAT TATTTATTCATTCCTATCAAGATATTACCGTGCTGACTTTACTATTATCAATATGCCACCTTTAGATGAGTGGAAGGGCC GGGCGCCGTGGCAAAGATGAGCGTGGAATTTGTATCATTATGATTGATGAGCAGGTGAGTGTTGAGGCTAGTGTATTTGG TTTTCTGTTGCTTCAATTTATGAACATCCGGTCATATTACTTTCCTCAACTGATCTTATCTTTTCATCCACCCTGTGAAT TGCCCATTCTTTATTTAGCCTTGTGGGTCTGGGATCTTTTGATGCAGTAATTCATTCATAACTGCTCACATTACGCTGAG TAATATGTTTACGTCCTGCAACATATTGAGATCATATACGCGCATGCTTTTGTTGGTTTCAATCGTATGACGGGGGTACT AGTATACTGCTCTATCATCTGAATATTATGTTTGCATTCTGTTCTTAGCTATATAACAAATTCTCTTCTTGGATTTTAGG CAGAAACTTGAATGATAATTGGTTTTGCATTGATCAACCCGGCACTTATCTGATTATTTTGTGCAGATGGAAATGAATAA CCTCAAGGACATGGTTCTGGGTAAACCTGCTCCTTTAGTTAGTACATTCAGGCTTAGCTACTACTCAATTTTAAATTTGA TGAGCCGTGCAGAAGGCCAGTTCACTGCCGAACATGTAATAAAGAATTCATTTCATCAATTTCAATATGAAAAGGTTTGT ACTGATCCATTTCCTTCAAAATCTTATTAGCTTATGTTGCACTATGGTGTTTAACTCATGGGCACCTTACTCTTGTTCAG GCCTTACCTGATATGGGAGAAAGGGTGTCAAAGTTGGAGCAGGAAGTAGCCTTACTCGATGCTTCAGGGGAGGTAATCTT TGTTCCTTTGCCATCAGTTTAGATTTCTTCATTATGTATTCTATGTTGTATTAATATATTGATATTTGATTTAATACAAG TAATTACTTATGTAGGCCGAGGTATCTGAATATCATAAGCTAAAACTGGAAATAGCACAGCTTGAGAAGAAGATGATGGC ACAAATTATAAGGCCTGAAATGATTCTTTATTTTCTTGTCCCTGGTCGATTGGTAAGTAATAGTAGGCATCAGCTTGGAA ATGCATTTGAATTATTTTTTCCCTTCTCTAATTAATCCTGAGAGTCAGTATTAAATGAGTTTATGATATCATTGATGCAT GAATATATATTAATAAATGTCAGGTATTTGTTAAGTTTTTTTATCCCTCTTGTGCCTTTGCTTGCAGTTGTTCATTTAAG GTTCTTCTGTTCTTAATTTGTCTTCTGCTGCTACTTTTTCCAGCACATTTAACTGAGATAGATGAATTTTTTTAACCTTG CAGATCAAAGTAAGAGAAGGTGCAACTGATTGGGGTTGGGGTGTTGTAGTCAATGTTGTTAAGAAACCTTCTGGTGGTGG TTATATAGTTGATACTTTACTACATTGTTCACCTGGCTCAAATGAAAACAGTTCACGACCAAAACCATGTCCGCCGCGGC CTGGAGAGAAAGGTGAAATGCATGTGGTAAGCTGACATCCCAAACAATTTTGCTACTTTTTGATGGCTCTCTATTGTAAC TCCCTCCACATATCTGAAAAATTTCTATTACTTTCTTTTGATTGCTTCCTTTTGCAATAGGTCCCTGTTCAATTACCATT GATATCTTGTCTTAGTAAACTGAGGATATATATTCCTCCTGATCTTCGACCCTTGGAGGCAAGGCAAAGTACACTCCTTG CTGTACAGGATATGGGCAACCGTTTCCCTCAAGGTATTCCAAAGCTTAACCCTGTGAAGGTAATTATTTTCCAATCTCAA CCTTGAATGCCTTTTCTGTATCATATCCACTTCTCTTCATTGTTGTTCATCTTATGACTTTTCCATCTCATCCTCCTTCT TTAGTGGAGAAGATTCTTTAACACATGGTCATATTGAACTTGAGTGATCTTTAACAGAATCACAACATTATATATACATA ATATTCTCTAAAATAAATTTCCAGGACATGGATGTTAAAGATCCAGAAATAGTTGAACTTGTCAATCAGATAGAGGAACT TGAGAAAAAGTTGTTTGCTCATCCTATGCATAAGGTTTGTTAAAATGAACTCTGGCCCCTATTTTGTATCTTATAGATGT AACATTGCTTGCTCTTTGGTTTGAATCTTTCCTTAATATTTTGCTGTAACATAGCATCAAAATGTGGATCAAATTAAAAG CTTTGAGAGGAAAGCAGAAGTGAATCATGAAATCCAGCAACTGAAGACAAAAATGCGGGATTCTCAGGTATTTCATTGCC CAGGCTTCGTTATTTGCTAAATTTTATTATTAAACCACATGATAGTATCTGCTATGCATTATATTTGTGCCCATGTGAAT GAACAATTTAACATTGCATGAGATGTTAATATGTCAATATTATTAATGACAAATTTTGAGTTCACTACTGTGGAATGATG ACAATGATAACTGTATTCCTTTATATAATTTCCTAAACTATGGTATGGATTCATTAGTAACTGAAAAACATGCATAAATT TTTCAGCTACAAAAATTTCGCGAAGAACTGAAGAATCGCTCACGAGTTTTAAAGAAGCTAGGTCATATTGATGCTGACGG TGTAGTTCAGTTGAAGGGACGGGCAGCCTGCTTGATTGACACAGGCGATGAACTCCTTGTCACCGAATTAATGTTCAACG GTGATTCAATATGCATTTCATTTTCTGCATAGTGCTTTCTGTAAAGCCTACTGCATAATATGTAACTATTTTTCTTCTTC TTTTTTTCCATGCTCCCAATAGGTACTTTTAATGATTTAGACCATCATCAAGTGGCTGCCCTTGCAAGTTGTTTTATACC AGGAGATAAGTCGAATGAGCAGATACAACTGAGAACCGAGCTTGCGAGACCACTACAACAGCTTCAAGACAGTGCAAGAA GGATAGCAGAGGTGTTTTATTATTTAACTTTGTATTTCTTGAGAATCTGTGAATTAAATTATAAGTGGGATCACTCCATG GTCACAGATACAACATGAATGCAAATTGGATATAAATGTGAATGAGTACGTGGAATCAACAGCAAGGCCATACTTGATGG ATGTGATATACTCTTGGTCAAAGGTTAGTTATATATTTCTTCAGCTTGAGCGTGTTATCTACTTGTAAGTCATTTGCTCG ATTTCTGCCAATGTAGTCAAAGTCTAAATTTTACCATGAATTGGGAAGGGGAATGAAAATCTTAGATTATCAAAATTGTA ACATGAATTGTAAGATTTCATATATATATATATACATGTGTGTGTGTGTCTAGCATGAATAAGAAAAAACCCATTAAATC ACTAAAAACACGTTATAAACTCACATTCATAATCAACAACCGACACAAGAAGGGTCTTGGACTTGATTGAACAAAGCAAC ACTGATTTACAGGTTTTCAAAGTTTATATTAATCTCTCGTCTTTCATTTCAAATTTGTCTTCCAGGGTGCAAATTTTTCG GATGTTATACAAATGACTGACATCTTTGAGGGAAGTATCATTAGGAGTGCTAGAAGGCTTGACGAGTTTCTGAATCAGGT ATCCAAGTATCCACCCTCTAACTGTCAAACATGTGGTCCCATTTTTTTATGTTAACTTTCTTAAAACTCGTGTCTTGCTA ATAGCCCATTCACTAAGAAGTGGAAAAGGGCAAGAAAATGTGGTTAAGGTGGGGTTGGTGGAACATGGCTCAATAAGTGT GCTATTCTGGATAGTTACTAGTTCACACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCTACATTACATA TGGAACATTTGATATATGCTTGAAGTTTGTGGTGTACTTGCCATAAAAGCAGAAGGGATTTTCCCTGAGGGAAATCAGAC ATAGTTTACTTGATTATTGCATCTGAGTATGTTTTAGCAGTTCTTGAAATTCATTTACCTCTGTTATTATTTTGGGACAA ATGAAATTCATAGTTTCCCATCTATGTTCTTCAAGTATTGCAAAATATTCAGATTTTACCTTTAGAAGCTTATACCATAA ATATCAGTAGGCTTGACTATTTTCCAAGTCATCTCTACGAAACATTTTCTGTCTATTTTATTGTTTGGAAACCAAAAGCA TGTTTGCATTGACATTATGGATTTTTGGAGTTCTGATTGTCTTGCCTCTTTCCAGTTGCGTGCTGCTGCTAATGCAGTAG GAGAGGTTGACTTGGAGAAAAAATTTGCAGCAGCAAGTGAAAGCCTTCGAAGAGGTATTATGTTTGCAAATTCTCTGTAT CTGTGACTTGTTTCCCTGCAGGCCATTCCCTATATTCATGGCTTTTCTGGGAGGCAGAAAGCTTTTATCTTCACATCCAA CTTTCTGGGTGCGCCTAATTCCTTCTCTGGTAAATATTTTCGTTCAATTATGATGCACACTGTATACAGTCACTGATAGT AAAAGGAGTGGTCGTAGAGTGATAGAAAAATCCAGTCAATAG
CDS sequence (LotjaGi4g1v0439700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGGAATCTTCAACACTCGGAAAGCGAAGAGAATCTGAGCTCAACAGCGACACTCCAAATCCAATCCCAAAGAA ACCTCGCAGCAGAGAACGAACATGCGTCCACGAGGTCGCAGTTTCGAGCGGTTACCTCGCCACGAAGGAGGAAGCAATTC ACGGCACTCTCTCCAACCCTCAGTACAACGGTCCAATGGCGAAGTCGTACCCCTTCACCCTCGACCCGTTCCAGCAGGTT TCCATTTCCTGCCTGGAACGAAACGAGTCGGTTTTGGTCTCCGCGCATACCTCCGCCGGGAAAACTGCGGTGGCGGAGTA CGCCATTGCAATGTCGTTTCGGGATAAGCAGAGGGTTATCTATACTTCGCCGTTGAAGGCGCTGAGTAACCAGAAGTACA GGGAGCTCAGCCAGGAGTTCAAGGATGTAGGGTTGATGACCGGAGACGTCACGCTCTCGCCGCACGCGACGTGTCTTGTA ATGACCACGGAGATTCTCAGGGGAATGCTGTATCGTGGCTCTGAGGTGTTGAAGGAGGTTGCTTGGGTTATCTTCGACGA GATTCACTATATGAAGGATCGAGAGAGGGGTGTTGTTTGGGAAGAGAGTATTATCTTTCTGCCGCCTGCTATCAAAATGG TTTTCCTCTCTGCTACCATGTCCAATGCCACTGAGTTTGCAGAGTGGATTTGTAACATTCACAAGCAGCCTTGTCATGTG GTGTACACTGATTTTCGCCCCACCCCTTTGCAGCACTATGTTTTCCCCATTGGTGGGAATGGGTTGTATTTGGTTGTTGA TGAGAATGAGCAGTTCAGGGAGGACAATTTCATGAAGCTGCAGGATACTTTCTCCAAGCAGAAGGTTGGTGATAGCGGCA GGGGTGCTAAGTCCAATGGCAGGTTCAGCAAAGGTGGCTCTGGTTCTGGTGGTTCTGACATTTTCAAAATTGTTAAGATG ATCATGGAAAGGAAATTCCAACCTGTTATCATCTTTAGCTTCAGTAGAAGAGAGTGTGAGCAGCACGCAATGTCTATGTC CAAGCTTGACTTCAATACCGACGATGAAAAGGATACAGTGGAACATATTTTTCGTAATGCAGTGCTCTGTTTGAATGAAG AAGATAGGAGCTTGCCTGCTATTGAGCTGATGTTGCCACTTCTTCAGCGAGGAATTGCTGTCCATCATTCTGGCCTTCTT CCTGTTATCAAAGAATTGGTTGAACTTCTTTTCCAAGAAGGTCTTGTAAAGGCCCTCTTCGCTACTGAGACTTTCGCAAT GGGTTTGAATATGCCAGCAAAAACTGTTGTTTTCACTTCTGTTAAGAAATGGGATGGTGATAGTCACCGTTATATTGGAT CTGGTGAATATATACAGATGAGTGGAAGGGCCGGGCGCCGTGGCAAAGATGAGCGTGGAATTTGTATCATTATGATTGAT GAGCAGATGGAAATGAATAACCTCAAGGACATGGTTCTGGGTAAACCTGCTCCTTTAGTTAGTACATTCAGGCTTAGCTA CTACTCAATTTTAAATTTGATGAGCCGTGCAGAAGGCCAGTTCACTGCCGAACATGTAATAAAGAATTCATTTCATCAAT TTCAATATGAAAAGGCCTTACCTGATATGGGAGAAAGGGTGTCAAAGTTGGAGCAGGAAGTAGCCTTACTCGATGCTTCA GGGGAGGCCGAGGTATCTGAATATCATAAGCTAAAACTGGAAATAGCACAGCTTGAGAAGAAGATGATGGCACAAATTAT AAGGCCTGAAATGATTCTTTATTTTCTTGTCCCTGGTCGATTGATCAAAGTAAGAGAAGGTGCAACTGATTGGGGTTGGG GTGTTGTAGTCAATGTTGTTAAGAAACCTTCTGGTGGTGGTTATATAGTTGATACTTTACTACATTGTTCACCTGGCTCA AATGAAAACAGTTCACGACCAAAACCATGTCCGCCGCGGCCTGGAGAGAAAGGTGAAATGCATGTGGTCCCTGTTCAATT ACCATTGATATCTTGTCTTAGTAAACTGAGGATATATATTCCTCCTGATCTTCGACCCTTGGAGGCAAGGCAAAGTACAC TCCTTGCTGTACAGGATATGGGCAACCGTTTCCCTCAAGGTATTCCAAAGCTTAACCCTGTGAAGGACATGGATGTTAAA GATCCAGAAATAGTTGAACTTGTCAATCAGATAGAGGAACTTGAGAAAAAGTTGTTTGCTCATCCTATGCATAAGCATCA AAATGTGGATCAAATTAAAAGCTTTGAGAGGAAAGCAGAAGTGAATCATGAAATCCAGCAACTGAAGACAAAAATGCGGG ATTCTCAGCTACAAAAATTTCGCGAAGAACTGAAGAATCGCTCACGAGTTTTAAAGAAGCTAGGTCATATTGATGCTGAC GGTGTAGTTCAGTTGAAGGGACGGGCAGCCTGCTTGATTGACACAGGCGATGAACTCCTTGTCACCGAATTAATGTTCAA CGGTACTTTTAATGATTTAGACCATCATCAAGTGGCTGCCCTTGCAAGTTGTTTTATACCAGGAGATAAGTCGAATGAGC AGATACAACTGAGAACCGAGCTTGCGAGACCACTACAACAGCTTCAAGACAGTGCAAGAAGGATAGCAGAGATACAACAT GAATGCAAATTGGATATAAATGTGAATGAGTACGTGGAATCAACAGCAAGGCCATACTTGATGGATGTGATATACTCTTG GTCAAAGGGTGCAAATTTTTCGGATGTTATACAAATGACTGACATCTTTGAGGGAAGTATCATTAGGAGTGCTAGAAGGC TTGACGAGTTTCTGAATCAGTTGCGTGCTGCTGCTAATGCAGTAGGAGAGGTTGACTTGGAGAAAAAATTTGCAGCAGCA AGTGAAAGCCTTCGAAGAGGTATTATGTTTGCAAATTCTCTGTATCTGTGA
Protein sequence (LotjaGi4g1v0439700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKESSTLGKRRESELNSDTPNPIPKKPRSRERTCVHEVAVSSGYLATKEEAIHGTLSNPQYNGPMAKSYPFTLDPFQQV SISCLERNESVLVSAHTSAGKTAVAEYAIAMSFRDKQRVIYTSPLKALSNQKYRELSQEFKDVGLMTGDVTLSPHATCLV MTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCHV VYTDFRPTPLQHYVFPIGGNGLYLVVDENEQFREDNFMKLQDTFSKQKVGDSGRGAKSNGRFSKGGSGSGGSDIFKIVKM IMERKFQPVIIFSFSRRECEQHAMSMSKLDFNTDDEKDTVEHIFRNAVLCLNEEDRSLPAIELMLPLLQRGIAVHHSGLL PVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMID EQMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDMGERVSKLEQEVALLDAS GEAEVSEYHKLKLEIAQLEKKMMAQIIRPEMILYFLVPGRLIKVREGATDWGWGVVVNVVKKPSGGGYIVDTLLHCSPGS NENSSRPKPCPPRPGEKGEMHVVPVQLPLISCLSKLRIYIPPDLRPLEARQSTLLAVQDMGNRFPQGIPKLNPVKDMDVK DPEIVELVNQIEELEKKLFAHPMHKHQNVDQIKSFERKAEVNHEIQQLKTKMRDSQLQKFREELKNRSRVLKKLGHIDAD GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQH ECKLDINVNEYVESTARPYLMDVIYSWSKGANFSDVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEVDLEKKFAAA SESLRRGIMFANSLYL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 34 | 34 | - | – | |
| MobiDBLite | 1 | 17 | 17 | - | – | |
| PIRSF | 2 | 976 | 975 | 0.0 | ||
| PANTHER | 5 | 976 | 972 | 0.0 | – | |
| PANTHER | 5 | 976 | 972 | 0.0 | – | |
| CDD | 35 | 246 | 212 | 1.22338E-147 | – | |
| Gene3D | 45 | 246 | 202 | 2.2E-78 | – | |
| SMART | 70 | 253 | 184 | 4.1E-35 | ||
| Pfam | 76 | 222 | 147 | 2.3E-18 | ||
| ProSiteProfiles | 82 | 238 | 157 | 24.844 | ||
| SUPERFAMILY | 85 | 482 | 398 | 8.42E-47 | ||
| CDD | 246 | 480 | 235 | 1.21807E-60 | – | |
| Gene3D | 247 | 500 | 254 | 2.0E-83 | – | |
| MobiDBLite | 287 | 309 | 23 | - | – | |
| ProSiteProfiles | 313 | 514 | 202 | 12.944 | ||
| Pfam | 367 | 468 | 102 | 9.1E-7 | ||
| SMART | 379 | 468 | 90 | 1.0E-16 | ||
| Gene3D | 507 | 966 | 460 | 6.4E-148 | – | |
| Pfam | 524 | 773 | 250 | 2.8E-69 | ||
| Gene3D | 531 | 774 | 244 | 6.4E-148 | – | |
| Coils | 568 | 588 | 21 | - | – | |
| CDD | 595 | 712 | 118 | 2.80508E-45 | – | |
| Gene3D | 597 | 707 | 111 | 6.4E-148 | – | |
| Coils | 758 | 778 | 21 | - | – | |
| SMART | 798 | 976 | 179 | 2.6E-83 | ||
| Pfam | 801 | 971 | 171 | 8.9E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | RNA helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | RNA catabolic process | The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. |
Expression pattern of LotjaGi4g1v0439700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…