Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0238400 |
Transcript ID | LotjaGi5g1v0238400.4 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | ABC transporter B family protein; TAIR: AT3G62150.1 P-glycoprotein 21; Swiss-Prot: sp|Q9M1Q9|AB21B_ARATH ABC transporter B family member 21; TrEMBL-Plants: tr|I1JBB1|I1JBB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0238400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54650424..54656357) extracted from Lotus japonicus Gifu genome v1.2.
ATTGAAGGCAGTGATCCAACATGAGTGTGGAAGAAGATGGAGTGAATAATAAGCATGATGAGACAACGAATCCTGCAGAG ACTAGCACAAATGGGGAGAAGGAAGGAAAGAGCAAACAGAAAGAAAAACAGGAGACAGTTCCATTTCACAGATTGTTCTC ATTTGCAGACTCCACCGACATTCTGTTGATGTGTATTGGAACCATTGGTGCTGTTGGAAATGGAATGGGTTTGCCTCTCA TGACATTGCTCTTTGGTCAAATGATTGATAGCTTTGGAAGTAACCAGAGAAACCCTGATGTAGTGGAACAAGTGTCCAAG GTATGACAAGTCTTAGTTACTAATAGTATATGTTCGGTTCTACCGTAAAATGCTCTAGAATCACTTCTGGTTAGAAGCTA CGAGTTTTAATTCTGGTGCAAATTGTGAAATCAAACATACTATATAGATGAAATTTGTCTTTACTTTGCTGACATGCTTT TGAACCTTTGATTAGAGTTAATTAGTTACATGATAAAATTGCAGGTCTCTTTGAAATTTGTATACTTGGCAATAGGATGT GGGGTTGCAGCTTTCCTTCGTAAGTGCATTTTGTAATTAATATCACTGTGGTTTTTCATTTTCCATGAAGAATTTTAATT AATCTCTCCAGTTTTTGAGATTTGATGAAAAGACAGCTAACATGAGAGAACCATTTCAATTTTCAGAGGTGTCATGTTGG ATGGTCACAGGGGAAAGACAAGCTGCAAGAATAAGGGGATTGTATTTGAAAACTATACTGAGACAAGATGTGGCTTTCTT TGATAAGGAAACAAACACAGGAGAGGTGATAGGGAGAATGTCAGGGGACACGGTTCTCATACAAGATGCCATGGGTGAGA AGGTATTATAATATGCTATGCTATGAGAGCAAAATTCTAGACTTGAATGAAAACTATTAGCAAACAAGTGTTTTGATTCC ACTGAATACTTGCTTTTATTGAAAACAGGTTGGGAAATTTCTGCAGCTAATAGCAACATTCATTGGGGGATTTATCATTG CCTTCATCAAAGGGTGGCTTCTTACTGTTGTCATGTTGTCCACTCTTCCACTTCTTGTTGTGTCAGGTGCTGCCATGGCT GTCATCATAGGCAGGATGGCTTCTCGAGGTCAAACTGCTTATGCGAAAGCAGGACATGTAGTTGAACAGACAATTGGCTC AATAAGAACGGTAAGTTGTTGTTAAACCAAAGTAGATATCAGAAGATTGAGATATTATATAATTTCTCACTAGAATGCAC TTGTGTCTTTACTTCTATGTATGTTTTCAGGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTAACTGATTATAGCAAATT TCTCGTAGATGCTTACAAATCAGGAGTTCATGAAGGCTCCACAGCTGGAATAGGCCTAGGAACAGTTATGTTTGTAATTT TTGGTGGTTATGCTTTGGCTGTGTGGTTTGGTGCAAAGATGATAATGGAAAAAGGATATAATGGCGGCACAGTGATTAAT GTGATTATTGCAGTTTTAACTTCCTCCATGTAAGTAGCTTCATTTATATGTATTTCCTCTACTAAGGAAGTTTGAAAGTT CCATATTTCTTTATTGAAACCTCAACTCATTCACTTTTTTTCAAATGGATGTGTATTTTAGGTCTCTTGGACAGGCATCT CCTAGCTTGAGTGCTTTTGCTGCAGGCCAGGCTGCAGCTTACAAAATGTTTGAAACAATTAAAAGGAAGCCAGAGATAGA TGCATCCGATCCTAGTGGAAAAATATTAGAGGACATTAGAGGTGAAGTAGAGTTAAGGGATGTTTATTTCAGTTATCCAG CCAGACCGGAGGAGCTGATATTCAATGAATTCTCTCTTCATATATCTAGCGGTACAACTGCAGCATTAGTTGGACAAAGT GGAAGTGGCAAGTCCACAGTCATCAGTTTGATAGAAAGATTTTATGATCCACATGCAGGTGCAGTTCTTATTGATGGTAT TAACCTGAAAGAATTTCAGCTTAGGTGGATCAGAGGAAAAATTGGCCTTGTTAGTCAGGAGCCTGTGTTGTTTGCATCTA GCATTAAGGAAAATATTGCATATGGAAAGGATGGAGCAACGGTTGAAGAGATAAGACATGCATCTGAACTTGCAAATGCT GCTAAGTTCATTGATAAATTGCCTCAGGTTAGGTTCTATCTAGAGTACTTTAATTTCAAAGCTAGTTCTAGAATTTAATC TTGAAACTTGTTAAGTAACCTTGAAATTTTTCCATTGCATGCAGGGATTGGACACAATGGTTGGTGAGCATGGAACTCAG TTATCTGGTGGACAAAAGCAGCGCATTGCGATTGCAAGAGCAATCCTAAAAGATCCAAGAATTCTACTTCTAGATGAAGC AACAAGCGCACTTGATTCGGAGTCTGAAAGGGTAGTGCAAGAGGCTCTAGACAGGATCATGGGAAACAGAACTACAATTA TTGTGGCACATCGCTTGAGCACTGTGAGGAATGCTGATATGATTGCTGTAATTCACAGAGGGAAGATGGTCGAAAAAGGT ACCACACAACACTTTTAGAAAAAAAAAAGGCTTTTTTTCATTGATTCAACCATTGATCACAAATAGGAAAATTTTCTTGT ATACATATCTTACTATAACTTTGTTTATATTAATCAGGGACACACTCAGAATTACTCAAGGATCCCGAGGGAGCTTACTC TCAATTAATACGATTACAGGAAGTAAACAAGGTATCAGAAGAAACTGCAGACCATCACAACAAGAATGAACTTTCTGTAG AATCATTTAGACAATCTAGTCAAAGGAGATCACTTCAAAAATCCATTAGCCGAGGATCATCTTTAGGGAACAGTAGCCAC CATTCATTTTCAGTTTCTTTTGGTCTACCTACAGTGGTTAATGCCTCTGATCCTGAACAAGAAAACTTACAACCCAAGGA AAAAGCACCAGAGGTTCCACTACGTCGCCTTGCTTCCCTCAACAAGCCAGAGATTCTTGTTCTTTTCCTAGGATGTTTAG CTGCAGTAGGAAATGGTGTTATATTTCCAATATTTGGCGTATTGATTTCCAGTGTCATCAAAACATTCTATGAACCATTC GATGAGATGAAGAAGGATTCCAAGTTTTGGGCAATAATGTTTATGATCCTTGGTATAGCATCATTGCTAGTGATTCCAGC ACGATCTTACTTTTTCTCTGTGGCTGGATGCAAGTTAATCCAACGTATCAGGTTAATATGTTTTGAGAAGGTGGTTAACA TGGAGGTCAGTTGGTTTGATGAGCCTGAGAACTCGAGCGGTGCTGTTGGTGCAAGGCTCTCAGCAGATGCTGCTTCTGTT CGTGCCCTTGTTGGTGATGCTCTAGGACTATTAGTTCAAAATATAGCAACTTTATTGGCAGGTTTGATTATTGCATTCGT TGCAAGCTGGGAGCTAGCATTTATTATTCTTGTCTTGATCCCCTTGATTGGAGTAAATGGCTATGTTCAAATGAAATTCA TGAAGGGATTCAGCGCAGATGCAAAGGTGAGTACCATTCTCCATTGCTATACATGAATAGTTGTATTATTAAGATAATGT ATGAGATAAATTCTCAATATGGAAATGGGAATTGTTGCAGATGATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAG TTGGGAGCATAAGAACTGTAGCGTCTTTCTGTGCTGAGGATAAGGTTATGGAACTATACAGGAAGAAATGTGAGGGACCT ATGAAAACTGGGATAAGGCAGGGTGTGATAAGTGGATCAGGATTCGGGGTTTCATTTTTCTTACTATTTTGTGTCTACGC AACCAGTTTCTATGCAGGAGCTAGACTTGTGGATGCTGAGAAGGCAACATTCTCAGATGTTTTTCGGGTACTAACTCTTT CATACTTATCATACTTACATCAACACTTGGTTTCTCCATTTGAAAATGTAGATATTTTCATGTGTTGCAGGTTTTCTTTG CTTTAACCATGGCAGCTATTGGCATTTCTCAATCAAGCTCCTTTGCTCCGGACTCAAGCAAAGCCAAGTCAGCTACCGCT TCTATTTTTGGAATGATTGACAAGAAGTCAGAGATTGATCCAAGTGATGAGTCTGGTACCACCCTTGACAATGTTAAAGG GGAAATTGAGCTTCGTCATGTGAGCTTCAAGTATCCATCTAGGCCGGATATACAAATTCTCCGAGACCTCAACTTGGCTA TCCATTCTGGCAAGGTAAAGCTCACTTTAATATCTTTAAACTCCTTTCATTTCAAAGTACAACTGAGAGTTGAAAACGTA AGTTGTGTTACTTGTTGCATCTAACTTTTATTATCAAAATTGTTATTGCCTCAGACGGTGGCTCTTGTTGGTGAAAGTGG GAGTGGGAAATCCACAGTGATTGCCTTGTTGCAGAGATTTTATAATCCTGATTCAGGTGAAATCACTCTTGATGGGATAG AAATCCGAGAGTTACAACTCAAGTGGTTAAGGCAACAGATGGGGCTTGTGAGCCAAGAGCCAGTGTTATTCAATAACACT ATCCGTGCCAACATTGCCTATGGAAAAGGAGGCAATGCAACTGAAGCAGAAATCACGTCTGCATCAGAACTTGCCAATGC ACACAGGTTTATCAGTGGGTTACAACAGGTAAGAATTAATTAAAACACCCCTTAACCTTTTTTTTGTCTTTAACTTTTTT TTAGCTGCAATAGAAATACCTTTAACTGACCTATTTAGTGTGTTTAGATTAGCTTATTGTTCCTCAAAATTGATTTTGGA ATTTAGAAATTACTCACATAAGTTCTTTCCATTAAGACTTTGTCTTTAGAATCATTTGTAAAAGGACTTCCAAACATATT ATTCTCTTTTAAGCATCTTTTCAAAAGTTTCTCATCTTAGCTTTTAAAATAAGTGCTTATACTTCTTACAATCTAATTGA ATTTGTTTCGGTGAAATTCTCAAGTAAACACTTATGTGATGAATACTTATTATCATAAACTTTTAATTAAGCTATGTAAT TAGGGTGTGTTTCAAAAAGTAATTTAATTAAACACTTAATGCAATAATAAGTGTTTATCGCATGAGTGTTTATTCATAAT TTAATTTGAGAATATATTTTAATAAGTTCAAAATGAGTATTATAGATGCTTAACCATACACTATTGCAAGTAACTTATGA AAAATAAGTTCAAAATAACTTATCATTATATCATAAGTTATTTGCATAAACTCATCAGATACTCCGCGTAAATGCTTATG CTACAAAATAAAGTTATTTCAAACGCACCTTTATACATTTAATAATTTTATGTTCATATATGTATTTCACATCCACCTTA CATGAATAAGAAGAAAAATGAGAGAAATGAGTGATATAAATATAACATAAAATATAAACAAATAAGAAAAATGTGTGGAA ATGAAATATGAGAGAAAATAAAGTGTGTATGAATCATTATTTTAATACATTATCTTTGCAACATTTTTATGTGGAATTGC TTGCTGTTCTTAATGGGCGGAACTGTTGACATTGGAAATTGTGGTTTGACTTAACAGGGTTATGATACCATAGTGGGAGA AAGGGGGACCCAATTATCTGGTGGGCAGAAGCAAAGGGTTGCTATTGCACGTGCCATCATCAAAAGTCCAAAGATATTGC TCCTAGATGAGGCCACAAGTGCATTAGATGCAGAATCAGAAAGAGTTGTTCAAGATGCATTGGACAAAGTCATGGTTAAT AGGACCACAGTGGTGGTGGCACATCGTTTGTCCACAATAAAAAATGCAGATGTGATTGCTGTTGTCAAGAATGGGGTTAT AGTGGAGAAAGGAAGGCATGAAACGCTCATTAATGTCAAGGATGGGTTTTATGCTTCCTTGGTTCAACTCCATACAAGTG CTTCAACTGTATAA
CDS sequence (LotjaGi5g1v0238400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGTGGAAGAAGATGGAGTGAATAATAAGCATGATGAGACAACGAATCCTGCAGAGACTAGCACAAATGGGGAGAA GGAAGGAAAGAGCAAACAGAAAGAAAAACAGGAGACAGTTCCATTTCACAGATTGTTCTCATTTGCAGACTCCACCGACA TTCTGTTGATGTGTATTGGAACCATTGGTGCTGTTGGAAATGGAATGGGTTTGCCTCTCATGACATTGCTCTTTGGTCAA ATGATTGATAGCTTTGGAAGTAACCAGAGAAACCCTGATGTAGTGGAACAAGTGTCCAAGGTCTCTTTGAAATTTGTATA CTTGGCAATAGGATGTGGGGTTGCAGCTTTCCTTCAGGTGTCATGTTGGATGGTCACAGGGGAAAGACAAGCTGCAAGAA TAAGGGGATTGTATTTGAAAACTATACTGAGACAAGATGTGGCTTTCTTTGATAAGGAAACAAACACAGGAGAGGTGATA GGGAGAATGTCAGGGGACACGGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAAATTTCTGCAGCTAATAGCAAC ATTCATTGGGGGATTTATCATTGCCTTCATCAAAGGGTGGCTTCTTACTGTTGTCATGTTGTCCACTCTTCCACTTCTTG TTGTGTCAGGTGCTGCCATGGCTGTCATCATAGGCAGGATGGCTTCTCGAGGTCAAACTGCTTATGCGAAAGCAGGACAT GTAGTTGAACAGACAATTGGCTCAATAAGAACGGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTAACTGATTATAGCAA ATTTCTCGTAGATGCTTACAAATCAGGAGTTCATGAAGGCTCCACAGCTGGAATAGGCCTAGGAACAGTTATGTTTGTAA TTTTTGGTGGTTATGCTTTGGCTGTGTGGTTTGGTGCAAAGATGATAATGGAAAAAGGATATAATGGCGGCACAGTGATT AATGTGATTATTGCAGTTTTAACTTCCTCCATGTCTCTTGGACAGGCATCTCCTAGCTTGAGTGCTTTTGCTGCAGGCCA GGCTGCAGCTTACAAAATGTTTGAAACAATTAAAAGGAAGCCAGAGATAGATGCATCCGATCCTAGTGGAAAAATATTAG AGGACATTAGAGGTGAAGTAGAGTTAAGGGATGTTTATTTCAGTTATCCAGCCAGACCGGAGGAGCTGATATTCAATGAA TTCTCTCTTCATATATCTAGCGGTACAACTGCAGCATTAGTTGGACAAAGTGGAAGTGGCAAGTCCACAGTCATCAGTTT GATAGAAAGATTTTATGATCCACATGCAGGTGCAGTTCTTATTGATGGTATTAACCTGAAAGAATTTCAGCTTAGGTGGA TCAGAGGAAAAATTGGCCTTGTTAGTCAGGAGCCTGTGTTGTTTGCATCTAGCATTAAGGAAAATATTGCATATGGAAAG GATGGAGCAACGGTTGAAGAGATAAGACATGCATCTGAACTTGCAAATGCTGCTAAGTTCATTGATAAATTGCCTCAGGG ATTGGACACAATGGTTGGTGAGCATGGAACTCAGTTATCTGGTGGACAAAAGCAGCGCATTGCGATTGCAAGAGCAATCC TAAAAGATCCAAGAATTCTACTTCTAGATGAAGCAACAAGCGCACTTGATTCGGAGTCTGAAAGGGTAGTGCAAGAGGCT CTAGACAGGATCATGGGAAACAGAACTACAATTATTGTGGCACATCGCTTGAGCACTGTGAGGAATGCTGATATGATTGC TGTAATTCACAGAGGGAAGATGGTCGAAAAAGGGACACACTCAGAATTACTCAAGGATCCCGAGGGAGCTTACTCTCAAT TAATACGATTACAGGAAGTAAACAAGGTATCAGAAGAAACTGCAGACCATCACAACAAGAATGAACTTTCTGTAGAATCA TTTAGACAATCTAGTCAAAGGAGATCACTTCAAAAATCCATTAGCCGAGGATCATCTTTAGGGAACAGTAGCCACCATTC ATTTTCAGTTTCTTTTGGTCTACCTACAGTGGTTAATGCCTCTGATCCTGAACAAGAAAACTTACAACCCAAGGAAAAAG CACCAGAGGTTCCACTACGTCGCCTTGCTTCCCTCAACAAGCCAGAGATTCTTGTTCTTTTCCTAGGATGTTTAGCTGCA GTAGGAAATGGTGTTATATTTCCAATATTTGGCGTATTGATTTCCAGTGTCATCAAAACATTCTATGAACCATTCGATGA GATGAAGAAGGATTCCAAGTTTTGGGCAATAATGTTTATGATCCTTGGTATAGCATCATTGCTAGTGATTCCAGCACGAT CTTACTTTTTCTCTGTGGCTGGATGCAAGTTAATCCAACGTATCAGGTTAATATGTTTTGAGAAGGTGGTTAACATGGAG GTCAGTTGGTTTGATGAGCCTGAGAACTCGAGCGGTGCTGTTGGTGCAAGGCTCTCAGCAGATGCTGCTTCTGTTCGTGC CCTTGTTGGTGATGCTCTAGGACTATTAGTTCAAAATATAGCAACTTTATTGGCAGGTTTGATTATTGCATTCGTTGCAA GCTGGGAGCTAGCATTTATTATTCTTGTCTTGATCCCCTTGATTGGAGTAAATGGCTATGTTCAAATGAAATTCATGAAG GGATTCAGCGCAGATGCAAAGATGATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGGAGCATAAGAACTGT AGCGTCTTTCTGTGCTGAGGATAAGGTTATGGAACTATACAGGAAGAAATGTGAGGGACCTATGAAAACTGGGATAAGGC AGGGTGTGATAAGTGGATCAGGATTCGGGGTTTCATTTTTCTTACTATTTTGTGTCTACGCAACCAGTTTCTATGCAGGA GCTAGACTTGTGGATGCTGAGAAGGCAACATTCTCAGATGTTTTTCGGGTTTTCTTTGCTTTAACCATGGCAGCTATTGG CATTTCTCAATCAAGCTCCTTTGCTCCGGACTCAAGCAAAGCCAAGTCAGCTACCGCTTCTATTTTTGGAATGATTGACA AGAAGTCAGAGATTGATCCAAGTGATGAGTCTGGTACCACCCTTGACAATGTTAAAGGGGAAATTGAGCTTCGTCATGTG AGCTTCAAGTATCCATCTAGGCCGGATACGGTGGCTCTTGTTGGTGAAAGTGGGAGTGGGAAATCCACAGTGATTGCCTT GTTGCAGAGATTTTATAATCCTGATTCAGGTGAAATCACTCTTGATGGGATAGAAATCCGAGAGTTACAACTCAAGTGGT TAAGGCAACAGATGGGGCTTGTGAGCCAAGAGCCAGTGTTATTCAATAACACTATCCGTGCCAACATTGCCTATGGAAAA GGAGGCAATGCAACTGAAGCAGAAATCACGTCTGCATCAGAACTTGCCAATGCACACAGGTTTATCAGTGGGTTACAACA GGGTTATGATACCATAGTGGGAGAAAGGGGGACCCAATTATCTGGTGGGCAGAAGCAAAGGGTTGCTATTGCACGTGCCA TCATCAAAAGTCCAAAGATATTGCTCCTAGATGAGGCCACAAGTGCATTAGATGCAGAATCAGAAAGAGTTGTTCAAGAT GCATTGGACAAAGTCATGGTTAATAGGACCACAGTGGTGGTGGCACATCGTTTGTCCACAATAAAAAATGCAGATGTGAT TGCTGTTGTCAAGAATGGGGTTATAGTGGAGAAAGGAAGGCATGAAACGCTCATTAATGTCAAGGATGGGTTTTATGCTT CCTTGGTTCAACTCCATACAAGTGCTTCAACTGTATAA
Protein sequence (LotjaGi5g1v0238400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVEEDGVNNKHDETTNPAETSTNGEKEGKSKQKEKQETVPFHRLFSFADSTDILLMCIGTIGAVGNGMGLPLMTLLFGQ MIDSFGSNQRNPDVVEQVSKVSLKFVYLAIGCGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVI GRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFIIAFIKGWLLTVVMLSTLPLLVVSGAAMAVIIGRMASRGQTAYAKAGH VVEQTIGSIRTVASFTGEKQAVTDYSKFLVDAYKSGVHEGSTAGIGLGTVMFVIFGGYALAVWFGAKMIMEKGYNGGTVI NVIIAVLTSSMSLGQASPSLSAFAAGQAAAYKMFETIKRKPEIDASDPSGKILEDIRGEVELRDVYFSYPARPEELIFNE FSLHISSGTTAALVGQSGSGKSTVISLIERFYDPHAGAVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKENIAYGK DGATVEEIRHASELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDSESERVVQEA LDRIMGNRTTIIVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEVNKVSEETADHHNKNELSVES FRQSSQRRSLQKSISRGSSLGNSSHHSFSVSFGLPTVVNASDPEQENLQPKEKAPEVPLRRLASLNKPEILVLFLGCLAA VGNGVIFPIFGVLISSVIKTFYEPFDEMKKDSKFWAIMFMILGIASLLVIPARSYFFSVAGCKLIQRIRLICFEKVVNME VSWFDEPENSSGAVGARLSADAASVRALVGDALGLLVQNIATLLAGLIIAFVASWELAFIILVLIPLIGVNGYVQMKFMK GFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKTGIRQGVISGSGFGVSFFLLFCVYATSFYAG ARLVDAEKATFSDVFRVFFALTMAAIGISQSSSFAPDSSKAKSATASIFGMIDKKSEIDPSDESGTTLDNVKGEIELRHV SFKYPSRPDTVALVGESGSGKSTVIALLQRFYNPDSGEITLDGIEIRELQLKWLRQQMGLVSQEPVLFNNTIRANIAYGK GGNATEAEITSASELANAHRFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQD ALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINVKDGFYASLVQLHTSASTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 37 | 37 | - | – | |
Phobius | 1 | 53 | 53 | - | – | |
PANTHER | 33 | 1262 | 1230 | 0.0 | – | |
PANTHER | 33 | 1262 | 1230 | 0.0 | ||
SUPERFAMILY | 38 | 364 | 327 | 2.49E-58 | ||
Gene3D | 46 | 636 | 591 | 1.5E-238 | ||
TMHMM | 54 | 76 | 23 | - | – | |
Phobius | 54 | 78 | 25 | - | – | |
CDD | 57 | 341 | 285 | 4.77744E-114 | – | |
Pfam | 57 | 331 | 275 | 2.2E-61 | ||
ProSiteProfiles | 59 | 345 | 287 | 47.174 | ||
Phobius | 79 | 104 | 26 | - | – | |
Phobius | 105 | 125 | 21 | - | – | |
TMHMM | 105 | 127 | 23 | - | – | |
Phobius | 126 | 180 | 55 | - | – | |
TMHMM | 178 | 197 | 20 | - | – | |
Phobius | 181 | 201 | 21 | - | – | |
Phobius | 202 | 206 | 5 | - | – | |
TMHMM | 202 | 224 | 23 | - | – | |
Phobius | 207 | 228 | 22 | - | – | |
Phobius | 229 | 282 | 54 | - | – | |
Phobius | 283 | 304 | 22 | - | – | |
TMHMM | 284 | 306 | 23 | - | – | |
Phobius | 305 | 315 | 11 | - | – | |
Phobius | 316 | 334 | 19 | - | – | |
TMHMM | 321 | 343 | 23 | - | – | |
Phobius | 335 | 709 | 375 | - | – | |
SUPERFAMILY | 370 | 618 | 249 | 2.38E-87 | ||
Gene3D | 373 | 621 | 249 | 1.5E-238 | – | |
CDD | 380 | 618 | 239 | 1.04564E-135 | – | |
ProSiteProfiles | 380 | 616 | 237 | 24.61 | ||
Pfam | 399 | 547 | 149 | 1.3E-33 | ||
SMART | 407 | 593 | 187 | 2.0E-15 | ||
ProSitePatterns | 519 | 533 | 15 | - | ||
MobiDBLite | 623 | 637 | 15 | - | – | |
MobiDBLite | 623 | 644 | 22 | - | – | |
SUPERFAMILY | 695 | 1020 | 326 | 1.06E-59 | ||
Gene3D | 696 | 1001 | 306 | 2.4E-79 | ||
CDD | 703 | 1018 | 316 | 4.48833E-130 | – | |
Phobius | 710 | 734 | 25 | - | – | |
TMHMM | 710 | 732 | 23 | - | – | |
Pfam | 713 | 985 | 273 | 9.4E-58 | ||
ProSiteProfiles | 714 | 1000 | 287 | 44.902 | ||
Phobius | 735 | 753 | 19 | - | – | |
Phobius | 754 | 777 | 24 | - | – | |
TMHMM | 755 | 777 | 23 | - | – | |
Phobius | 778 | 826 | 49 | - | – | |
Phobius | 827 | 851 | 25 | - | – | |
TMHMM | 833 | 852 | 20 | - | – | |
Phobius | 852 | 856 | 5 | - | – | |
TMHMM | 857 | 874 | 18 | - | – | |
Phobius | 857 | 874 | 18 | - | – | |
Phobius | 875 | 935 | 61 | - | – | |
Phobius | 936 | 955 | 20 | - | – | |
TMHMM | 936 | 958 | 23 | - | – | |
Phobius | 956 | 974 | 19 | - | – | |
Phobius | 975 | 995 | 21 | - | – | |
Phobius | 996 | 1265 | 270 | - | – | |
Gene3D | 1002 | 1027 | 26 | 1.7E-129 | ||
ProSiteProfiles | 1018 | 1257 | 240 | 21.429 | ||
SUPERFAMILY | 1025 | 1258 | 234 | 1.93E-83 | ||
Gene3D | 1028 | 1262 | 235 | 1.7E-129 | – | |
CDD | 1035 | 1258 | 224 | 4.09841E-126 | – | |
Pfam | 1047 | 1188 | 142 | 2.7E-33 | ||
SMART | 1047 | 1240 | 194 | 5.0E-17 | ||
ProSitePatterns | 1160 | 1174 | 15 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0238400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…