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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0235200 |
| Transcript ID | LotjaGi6g1v0235200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA ligase; TAIR: AT5G57160.1 DNA ligase IV; Swiss-Prot: sp|Q9LL84|DNLI4_ARATH DNA ligase 4; TrEMBL-Plants: tr|K7MBU8|K7MBU8_SOYBN DNA ligase; Found in the gene: LotjaGi6g1v0235200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:54499906..54514392) extracted from Lotus japonicus Gifu genome v1.2.
GATTCCATAACTCGTGTTAAGGAAGTCGTTGGTTTCATCCTTCACTTTCAGTCAGGGTGTTGAGTTTTGACTCTTGATTC CAGTCACATGATCAGAATCATCTCCCATCCTTGGCGGTTACTCTTCCAAATTCGAATTCGCGCTCACTGAAACCCGACTT CAACCTCATCGCCGCCGTACCAGAGAGAGCGCACGCTGAAAATGACGACGGAGCAGACGAAGTTCAGCGTGCTCTGCAGC CTATTCACATGGACGCAGAGAACCAAGTCGCCGGCGAAGAAGCGTTCCAAGTTCCGCAAGTTCCTCGACTCCTTCTGCAG AGACGCTAACTACTTCCCCGCCATTCGCCTCATCCTCCCTAACCTCGACCGCGAACGCGGCTCCTACGGCCTCAAAGAGT CCGTCCTCGCCACCTCCCTCATCGACGCTCTCGGTATGGCTAGGGATTCTCAGGATGCTCTCCGCCTCATCAATTGGCGT AAAGGCGGTGCTAAAACTGGTGCTAGTGCCGGCAATTTCGCACTCGTCGCCTCTGAGGTTGGATTCTCTTCTCTGAGCAT TTTGTATTGTGTGAGTGCATAGGGTTTTGGTGGCGGTTTTTGTTGTTGTTGTTGAAAATTGAATGTGAGTATTGTTGTTG GTTCTGAGGCAGGTGCTGCAGCTTAGGCAAGGGACTGCTTCTGGTGGTTTGACGATAAAGGAGTTGAATGACTTGCTTGA TCAATTGGCTTCGAGCGAAAACAGGTATATGGCTTTCGCTTTGATTGTTTCCGCGCTTCATTATTGTTTCTATTTGTTCT TTCGTTATTGCGGTTGCTTTTGCTGTATGTGTGTGATTGTGTGTATGCCTAAGGTCTGTTGATAGTGCTAGGGGATGGAA GTGTTTACATCATCTGAAGTTGTGATGGATGGGGAAGAATCTTTTATTATTACTATTATTGTTACTAATATGAAAAATAG GCGAGGAGTAGATAAAGAAAAAATAACTTTGAAGTTAAATGTTGAATTGAAAGTTTTAGTTCACCCTGCAAAAAATTGAT GCTGCAAGAATTTCTCTTTAAGTCATTCTTTATGATTGTTTGTGAGCATTGAGGCGTTCCAAATTAGTCCAATATCAAAC AACTAGAAGGAACTGAGTCTCGGGTTTAAGTCTTGTATGGAGAAAAACTTCGTAGAGAGAGCTAGCCTCATCGCGCTGTG GATGTTCCTGGCTCGTACAAGATTGGCTTTCGTGGAGGATAACTGTTACAAAGTGTTTCTGAGCTCTGCCACGTGCTAGG ACTAGGATATCTTTTTACTAGCTATTGGATAAGTTCTTAAACTCATCCCTGGGGGTCTACTATGAGGCAAATTGGACACC GAATTGACTATCATGAAACTCTGGCTTCTGGGTATTGAAGAAGCTAAAGCATAATGTTAAAAACTGAGACAGTTTTTCTT AGAAGCAGCACCAAGTACTGTTTGTTCTGATGTTTCTGAAGAAGATAACAACATCAATAGATAAAACCTTTGTCCCACTT TGCTTACTAGGTGGGGTTTGGACCAAATGACACCATTGTTTTATTCTTTTAAGAGGATCTGTTGTTGTTCTCTTATATGG TTCTCTTGTTTTTCTTAAATGAATTTTCTCTAACTTGAAAGAAGTCATTTAATGAAAATTCAGGATCAGTACACTATACT GGAACAAGACTTATTCTTCCATCTATATAGTTAAGTATGGTCATTGGAAATCTATTTCCAATCACTTGTAAGTTGTTTAT GCATCTCTTATCTATGGAAAAGACTGGCAACTAGCTCTAGCTCCAGCTGTCTAGGTTTTCCATCCTCCCACAATGCCTCC TATAAAGAGCTAGGTTCAAATGAGAGCGCTGCAGTCACTTCCCTTCTTAGAGAAGCAAAATAGCAGTATTGAACTCTCTT AATATTCAAATTCCTAATCCAACTTGTTATGAATTATGATAGTTTGCAGCAAATTTCTTCTCCATTGACAAGACAGAGTT CTTCCTTCCTTTCCATCCAAAGATAAAAATAACAAATAGTAATAACTAAGGAGAAGAATGCTTTTTACTGTAGTTTTTAC TTAATTCTTGTATGGCTTGACTATTATTACAGGGCTGAGAAGAATCTGGTTCTTTCTACCCTTATCAGAAAGACAAATGC ACAGGAAATGAAGTGGATTATCATGATAATTCTCAAAGGTGTTTCTCATTTACGCCTGTAAATTGATTTAATACATTTAA TGAGCTTTGAGCATGTAACTAAATTTTGTTGCAGATCTAAAGCTGGGAATTAGTGAAAAAAGCATTTTCCATGAATTCCA TCCAGATGCCGAAGACTTGTTTAATGTTACATGTGACTTAAAATTAGTTTGTGAAAAGCTAAAGGATCGGAACCAGCGCC ATAAACGGCAGGTTAGTTGTGATTTAGAAATTAGTTTTGGAACTCTACAGCTTACAAGTTACAACGATGGCAATTACAAC CTTTAATTTTTTAACTCGGGCTCTAAACAAGCCAAGATTGAGCTGAACACTTGCATTGTAATGCTAAACTCAGAAATGAA TAGCCAAAACGGTGTGTTCTCCTCCTGATTTATAATTCTCATAATACAAGCTGATATTCAGCCTTGTAAATCAGCTGAAC TGTATGTATACGTATATGAGAACAGAATAACATTCTCTTGTAAGACCTTTGAATGGCCACAAGTCTAACTCTAAGTTGGC TGATAGACCTAACTCCTAAGTATTTGTGTAGGACAATGGACCTAAACCTTTAAATTGACCACCAAATATATATTTTAAAA AATTAGAACAAAAATTCAATACATCAATAAGTCCTTATAAAGGGTAGAGCAATCCTCACCCATGAGCTAGCTTTTGGGGT AGAGTCTACCTAGATCCGTTTATTGGATGTGTGTAGTGCAATCCTCACCCTTGAGCTAGCTTTTGGAGTAGAGTTAGGTC TAGCCTGATTTCTAATAGTCTGAAAGACTTTTTAAATAACATAAAGCCCAACATTTTTTGTTACATAGGCTTTCACTAAA CTGTTATTCTAGCTTATTTACTGAATAGTCCCATGTCTGGTCAAGCTAGATCTAATGCAAACTCGGCCATAAGCCGCCTT ACCTTTTCCCACCCTTGAATCTTGAGCATTGTTAGGGAAAATAAAAGATAGTAACATAAATGGAAAGTTTTGTAACTGCT CATTACTACTTATAGTCTTATATATGCATGGCTTCTTTTCTTTTACAGGATATTGAAGTTGGAAAAGCTGTGCGCCCTCA ATTAGCTAAGAGAGTTGCTAATGCAGCTGAAGCATGGAAAAAGGTTTGCTGCACTTAGCCATTTAATCAATCATTTATGC CTCAACCAAATCACTTGTCATACTTGTGTCTTTTCTTTTGGCTACATAATATGGAGATGGGGGACGTTGGCCACATTTAG GCTTGGTAAACCTGAAGTTGTATGCTACTTGACCCTCAGGTTGATGACTTGTTCCCTTATTTGATTAGTATAGGAGTCTA GTATTTAGCCTAGTTTTGCTGTAAATAGGGGTCTGTGCTTCATCTTCTGGTTCACATCATTATACCCCAATGTCATTGTT AAAGAATATCATTGGAAGTCTCCTTTCTTTCTTTACTTCCTTCCCTACCTAAAACCCATAATTTCAACATCAATGACCAT CTATTCCATCTTATATTGTGGCAACAAGATTATATTCTCTTTTATTCAAAGTGATTTTCAACACAATGAAGCTGAGGGCT GTAGCAACTTTATTTTGAACTATTCAATAGAAAGTGCATGATTTCATGCATAGTGAATCCATTAGTTTGACCTTTATTAC TCACTTGTTTTTTTGTATGTTTCCTCTTTTATTTAGCTTCATGGGAAGGAAGTTGTTGTTGAGTGCAAATTTGATGGTGA TCGCATTCAAATTCATAAAAATGGAACAGAGATACATTTCTTCTCAAGGTAAGTGCAAATGTGTATTTTGTATCTGAATG TTTTTTTTTTTAACTTCAACTTGTGCCCCCCACCCTCCAGACTTTCTGTGCATTGGTGTGTGTTATTTCTGATTTTGAAA CCTTAGAATGCTCAGTGAATTGTTTTATATTTATATGGCAACTTATACATCAAAGTAGCTAGCTGAGGGAACATGTTGTG GCTATTGTTCTTTGATTTTCTGGATTCTCAACAAGGCGGAGATTTCTAAAAATGTTATGCACTATATTTTTTTACATATT CTTGCCACGGATAGGTCTTGTTGTTTACATTTTCACCCACTATTGCAGGAACTTTCTTGATCATTCTGAATATGCACATG CAATGTCAGCAATCATAATACAAAACATTCTTGTAGACAGGTGAGCATTTATATTGTGTTTCATACATTGCAATTTTGTT TGTTTTGAACAATTTCTATCCATTCTTTTATTCTTGCTAGTGGGAAGGTGCATGCAACTATAATTTTGGAGGAGGGGGGA TGTCTGACATTAAATATATAATATATAGGCAAAGGGGTTGATGTGGGTTTGGTTCTGTTTTCAAAATTAAAATATCAAGA AATCTGATACTAAAATGACTAGAAATTTCAACAATACTGCTGGTTGGGTTTCCTTTCTTCCAATTTCAGTATCTGTTTTA TTATGTTTACTTTTGGGCACAATATTGCTTAGCATTGATCTTTGTTATTTTCCCTTCTTCATCATTAACAAAATTTCCGC ATTGATATAAAAAATGCAGACAAACTCTACTGTTATAAAAACAGGATTCCTTCACTCTTGCCTTTTTTTATATAATTCCT TGAATATGCGAATACTATTCCAATACATGAAGTGCATCCTTGAATAATACAGTGATACTTATATTATTTATTTATTTATT TATTTTTCCATATGATCTTATTTAGGTGTATCCTTGATGGTGAAATGTTGGTCTGGGACACATCCTTGAATCGTTTTGCT GAGTTTGGCTCAAATCAGGAAATAGGCATGTGTACTTTAATAAGGCTTAGTCACTGTAAAGCTTTAATTTTCAGTAGCGT TTGCCTTTTAATATTCTTTGTTCTTGGCAGCCAAGGCAGCAAGGGATGGACTTGATAGTCATAGAAAGGTTCTTTACTTT CAATCTTCTTTATTTTTATTTTTGTATTAGAAAATATCAAGTTTAATTTGAACTTTTTCTTTGTCCTTTCTTGATGCAGT TATGCTGTATCCTTCTCTCTGGACAACTCAAGTATTAATTCCAACTATTAGGAAATGCGATATGATTTTGGTTTCAATGG TAAAATGAGCATCTAATTCTGTATGTTATGATAAATTTCTAATGCAAGAAACATTTATATCTAATATTCCTTGACTTGAG AATGGTTAGATGTTGCATTTGATATTCTTTATTTTGGAGATACTAGTGTGATTCACCAAACTTTAAAGGAACGGCATGAG ATTCTTCGTAGAGTCGTGAGGCCAATGAAGGGCCAATTGGAAATTTTAGTACCTAATGGTGGTATCAACAGTCACCGTTC TTCTGGTAAGATTCTCCTGGGATGTGTCTTATTGTATGTACTTTAAGAAAAAAAACATGTACTTTAAGAAAAAAAACTTT TTTCTTCTTGCATGTTGCAATTATTCAGCTGATCCATAAATTGGATTTGTTTGCTTACTACTTGATTAAGTATTCTTCTT GTTTTGATATCATATTATTATATTATTGTTTTTGTTGTTGCTATCTAGTCTGGTTGGTGCCTCTTCAGATCTGGGAATAG GAGGGCTAACCGCATTTGTTACTTACCTTACTGATTATAATGTCCATGTGGATTCAATTATCTCATATCCTTCACTCCAG CTTTAATGCCACATCGCTTGAATTGAATTATTTTGTGGACCATATAAATGAAGTCTTGAGACATGTTTCAAAGAGGGGAG AGTATTAGGAACCCAGAGAAGAAAAAATGAAAGATTGATTGAAAGAATAAAAAGAAAAGACTATTTTACCGAGATTGAAT ACAAGCTGGAGGATAGAATTATCAACCAGCTAACTGTTACACTAACAGTTAACTGATACTTACTCTTTTTCTTTAACTAA CTAACTGATCATTCTGCTATCTAACCATAACAACTATTGGCTAGTTAGTTACACAAACTACCTCTTCTTAAGAGGTCTAA TTCCTATCACAGTGCCAAACGTAAATCTGTCCCTGCTTGTAAGGCATACTGTTGGCGCTTTATGCTTTGGATGAGCCTTG GCTCTGTATTAAATAAATAAATTCAGCATTTTAGTCGTAGAGTTTTATCATTAATGATACTACATTTTATGACCACCTCT CATATCTTGCCATATTATTGCAATGTCAGTCCAAATTATTATATATATTGTTTTGGATGTGCAGCTTCTTGTCTCAAGTG TGCATCAAGAGTTTGACTAGAAATATGCATATCTTGGATACTCTTTTTACTATCTGTATCCACATTTGTTAATTTTCACA TTATTTTCTCTTCATTGATGCAATAAGTTAGTGGATTCTTGAATAACATTTTTGCAACGTGTTTATTGATTAAACGACCT CTTAACCATGTTTTTATGCAGGTGAACCATGTTGGTCATTTATTGCTCATAATGTGGATGAAGTTGAGAGATTTTTCAAA GAAACCATTGAAAATAGGTCAGCAAATACCCTAATTCATTTTGCCACCCAAGTTATGTATGGATATTTAAAGCCCTCAAG GATTTGGACTATGCCTAACTCTACCGAAAAAACTAGATTAGTGGTGAGGATTGTGCTACCATTCATAAGGATTTATTTGG TTGCATCTTAGTTAATGTGAGACTTCAACACTCCCCCTCACACCCAGAACTGGACATCTAGAGTGTGAAGTTTGCAGGAC TAAACATTTGAAGGTGCCCAAGATATAGGATAGGCTCTGATACTATCCTAAGAATTTGGACTAGGCCTAAATTTACCCCA AAATTTAGCTTAGGGGTGATGATTTTCCTACCATTTTAAAGATTTATTCGGCCATATCTCACGTCAATGTGGAACCTTAA CTAGATTTATGTATTCATTAGTCTTTTGGGGCATCCCAAACATCATGAGATTTAGTATTTAACTAGTTTTCCTATTATGC CTTGGGTCCTCTTATAAATTACCTGTTTTTCTAAATTCTAAGAGATTCTAATACATGACGATTAATTACTAAAAGTACAG AAAAGAAGGCATTGCACATGGTTCTTAAGAATTTTCATTTTTCTCCTTTATTTAGAGATGAGGGAATTGTTGTAAAAGAC CTCAGCTCCAAATGGGAACCTAGTGATCGCAGTGGAAAGTGGCTGAAATTGAAGCCTGAATACATTCAAGCTGGTTCTGA TCTAGATGTACTCATCATAGGTATATATGGTTTTGGTTCTTGTATTTATATACATCCTGAAGCAGCTTGTTTAACATTGT TATTTTGACTATGCTGTTTTTGACAATTTGTAGGTGGCTACTATGGCTCTGGACGACGTGGAGGAGAGGTTTGGTCATTT CTCCTCAGCATTTGAATTTTTTAAAAAATTATTCGTTGGATCTTAGAATGAACTTCTAAGGGCTTGCTTTACATTTCAGG TTGCTCAATTCTTGGTTGGCCTTGCAGAGCGTCCATCTCCAAATACACATCCCAAGCGGTATAAATGTTTTAGCGCTTAC ATTACACGTGCTTTTGGTCCTATTTGAACAATGCACTAGCTTGTTTTATATTATATTTCATTAATGGATTTATATTATAT TTAAAAGATGCTTCTTCACCCAATAACCCTTTTGGGCTTGAAGTATGAACAATGCGCTAGCCTGTTTTTATTTATGTGCA TAGCTATCTATGCATCGTTCAATTAATCAGGTACTTCTTTGTGTTGCAGATTTATCTCCTTTTGCCGGGTTGGTACTGGA CTTTCTGATGATGAGCTTGATGCTGTAATATCAAAACTAAAACCTTACTTCAGGTAGGTTATATGCGTGTGTGTGAAAAC ATTCCATGCGGATGCGGTGACATTTAGTATTAGTACTTTTAACAAATATTTTCAACAATTGGTTTGATTTCTGCGTCCTC TCTCTTACAGGAAGTATGAATATCCAAAGAAGAGGCCACCGAGTTTTTATCAAGTTACTAATCATTCAAAAGAAAGACCT GATGTGTGGGTTGATAGCCCTGAGAAGTAATTATTTCACCTTTTGTCTGAACGCTGAAGTACATGTGACTTTCATTTTCA ATGTTATTCAATATTTACGGTTCTCTTCATGCAGATCAATTGTTCTGTCTATAACAAGTGATATCCGAACTATACAATCT GAGGTGTGTCCTTGAAAATACAGTGTCTATCTGATGGTGAAAAAATTGTTGTCTACATAATCTTTCTTTTCTCATGAACT GCACAGTTTTAACCCAAATTACTTTATTGCAGGTATTTTCTGCACCTTACAGCCTGAGATTTCCTCGAATTGACAGGGTG AGATACGACAAGGCCTGGCATGAATGCCTTGATGTGCAATGTAAGGGATTTGCCAAATAAGATTTACATGTTCGTTGATG GTGTTGTTGTAAGATTGATTCCTTTCTTTTCCCCCAATTTCAGCATTTATAGAACTTGTGCATTCCAGCAATGGTACCAC ACAGAGGGATACAGAGCATGGCAGCAAGCAGGACAGTAAATCAAATCGCATCAAATCCTCCAGACGGGGAGAAAAGAAAA ACATGTCTATTGTTCCTTCCCATTTAATACAAACTGATGTTTCCAGTGTTAAAGGGGGGTCCTTAATATTTTCAAATATG ATGTTTTGTATCCTGGAGAATCTTGCTATCTACTAATCATCTGTCCAACTAACTGACTGCCAATTTTTGTTTTCTATCTA TATATTGCTTTATACATATGTCTTCATACTTATTTCCTTGTGTTTAAAATAATGTATTAAGCAAGTGTTCAGAGTGCTTT CGTGTTTTAGTTCTTTGTACTGTACTAATCATCCAACTGCTGGAAATCTTCCACCTTTTATGTCAATCTTTAAAATAATG GATATAGTTTCCCTTGACATGCATAGACTTTGTAAATGTGCCTCCATGTCATTCTCTCGAGTCCTTGCACAAAATAATTG CTGAGAATGGGGGAACTTTCTCAATGAATTTGAATAACTCAGTCACCCATTGTGTTGCAGCAGACAGCAAAGGTTCTTTC TCACTCTCTATCTCTATCTCTATCACTTTCTGTGTTCGCGTGTGCTTGAAAATGACAGATTTATTAGCATTTAGCTGAAT ATCTAATAAAAGCATATTCCTTTAGGGTTTAAATTTGAAGCAGCAAAACGCCATGGTGATATCATTCATTATACTTGGGT ATTTGATTGCTATGCACAAAAGAAGCTTGTCCCATTACAACCAAAGTGAGTATCATACCTGAATATGAAATTTTTACATC CGTTAAAGCTCTTCTGATTGTATATTGCTTTCAATGTTTCCTTCAAAAGGTACTTCCTGTTCCTATCTGAACTGACAAAG AAGAAGTTACAAGAAGAAATCGATGAGTTCTCGGACTTTTACTATTTGGATCTTGATATTGGAGATATCAAACAGGTAAT AGCATTAACACACTTTTTCCCCTTTTTAAGGAACTGAGTTATATCTTCCTTTCCTTTTGTGCACCATAGACTTTTTGTCT TAAGGTGGGTTGCTTACATCATAATTAGTAACTCCACGATTGATTTGCCGTGTTCTTTTCCCTTGGTATTTAACAAAGTC AATCTAGTTCATGCCTCAATAAATTAACCCTCCTTCATCTTTTTCAGCTTTTAAGCAATATTCATAGGTCGGAAGATGTC AGCACTGTTGATCATTATAGGAAAAAATACTGCCCAAAGGATAAGTGGTCTTTCTTTTGCGGATGCTCCGTTTATTTCCA CACTGTAATACCATCATTGTAAGATACAGTGACATGCAATCAAATATTTTTTTTTAACTTAAGCATATATTATGGGATTT AGGATTTTAATCATGATTATTATTTTCTCCAAGTTTGCTCTGTAGCTATCTGCTTATTCAACATTTTCATGTAGGAAAGA AGATTGGCAATTTCTATTGGGACTTTCTTTGAGGAGATTCAAGCTCGAAGTTCTCATGGGTGGTGGAAAAGTTGCTGATA ATATTAATTGTGCTACTCATCTAGTGACTTTGTTTGTGCCAAGATGTCATACTAACTTTTGGGAAGAAATTCAGAGTAGG TAAGTTCTGCATTTGCTGGCAACTTGTCATGTTGAATGTTAATTACAGGATAGCTATAGTTAATTTTAGATTTGCAAATT TTTGTGCAAGTTGTCTTATATATGATTTAAAAAACTGACCAACCAGTTTGACCAGAAAACTAATTGATTAGCTCAGTTGC TGGTCTAGGACAGCTGTTAGAACACCAAAGATAAACTCAATAATTACATTTCTGACACAGAAATCACACACTATACAGCA ATACACTCTGTCCCCGAGACTAAGATCTCCTACGGAGAGTACTCTCTGTCCATTATACATAATATCAACATCCCATATCC TATAGACAACCCTACTATAACATATACTCCTAATAAATTACTGCCGGTTGTCATTAATCAGTGCTGCCACTAATTATTTC CTAATCAGTGCTGCCACTATTTATTTCCTAAGGCTTAAAAACACATTTGGTCCCCCACGAATGCGTTTTGTGCAAAATGA GTCCCTAAACTATTTTTTTAGCATTCTCAGTCCCCCACGTTATGCTCTGTTACCACAGTTAGTCCTTCTGTTAGATTTTA AACGGTTTTTTCATATGTGGAATTTTTTAAATGACTTGGAGGGTTATAAGGAAAGAGAGGGAGATTATTAAGAGAGAGAA TAATCATGTTCATCTTCATCACATACAAGGACCCTAATTTTTCCAGATTTTCTTCACCACCATCTTTTTCATCTCTTGGT CTTCATCATCTTCGGTAAAATTTCAGAATAATTTAGAAGCTCAAGACCATCTAACTTCTCAATATTGAAATCCTAGATCT CAAAATTAAAAACCCCTAAGAAATTCAAATCCATCAACCAGGAGAAAGAAACAACCAGGAGGGAAAAAGAAACAAGGTAC AAGAAACAAGAAACGGGAAAAAAACAGGACAAAAGTAGAGCATCCACAGGCTACCACGCACAAAAGGAGCAGCCCAGCCC CTCCCACTCTCACACAACCACCTCACGCATCCACAACTGGGAAAATCTTCAAATATTCTTCATCTTCAAACCCAGAAGAA CTCCTTCAACTCAGACATCCCAACCATCCAAACCCAGAAACCCAACCCAGAAACTCCTTCAACCATAAAAATCCAGAAAA GAAACCTAGAAAATAACTCAATTCTGGATGCATCCATCCTTTCAATCGAACCCATGGCAGATCTATGAACCCGAGGTCGG GATCTTGTGCATCCGTCCTCTCAATCTCTTCCTCTTCTCTCCGATCTGATGGGTGGTGGTGGTGGTTAAGCGTGAGATTT AGATAAAGTGCAGATCGACTCGATTTAGGGTGCGAGAAGGGAGGAGTGGTGGCGGAGCGCCTGTGGCCATGGAAGAAGAT GAAGAAGATGAAGATGTGAGGTGATCTGGTGCCATTTGATGTGCCTGCTAAGGAGGTGAAAATAAATCACGTGATCCTCA CATGCTTTCGTTCTTGGCCCCATCTCACTCCTACTAAGTGTCCATGTCATTAAAAATTGACACTTAGGAGAGATCCGTTT GATTTCTGACGGAAAAAGGCTGAAGGTCTAACAGTAGTAACAGAGGAAAACGTGGGGGACTGAGAATGCTAAAAAGATAG TTTAGGGACTTATTTTGCACAAAACGCATTTGTGGGGGACCAAATGTGCTTTTAAGCCATTTCCTAATTATAGTGCCCAA GGAGATCACAAATTTTACATAAGAGGAAAATATGGTAACTGTTGAGATCTCCCATATTGACTAAAGATATGGTCAAATAA GTGTTTATAAAGGATAGAGCAACCTTCACCTCTAAGCTAGCTTTTGGGTAGAGCTAAGCCTAACCCAAATTCTAAGATGG TATCATAGTCTATCCTAGATCCGTTTATTGGAGACTAGCCATATATGGGGCCACCAACAGATGTTCATTCTTGCAAATTC CACGCTCCAGATGTCCAACCCTGGGCGTGAGGAGGTGTGTTGAGAAGTCTCACATTGACCGAGATACGACCAAATAAGTG TTAATAAAGGTCTAAGCTATCTTTTGGGTAGAGCTAGGCCTAATCCAAATTCTAAGAGTAACCATTTCAAACGGTTCATG TCTTTTGGTTTCATTGTTTTCATCTTACCAAATGCTATTGGGTACTTAGTATAGTAGCAAGGATGCCTACAGGTGACTGC CAAGAAGACAAAAATGTCTTAATTACTTACCTACCTGTGTTTTATCATCTTGGCTTGTTGTAAGTATTACCAAAATAAAA AGGCTAAAATTAACAATATTGCACAAATTTGTCACTATCTACGCACAATGCTGTTCATACATGGCTTGTCTTGTTGGTAA TCATGGTGGGAGTTTTCCCCCTTCCTCAAATGTTATATTCTGTACATTATACCACGAATTGTGTCACAAGGTTCATTCCC AACAGAGTGAAATTCTGTTAAGAATTTTTTCTCTTATTAGAAAAATTCATGGATGATAAATACTACCCCTCTTTCTCCTC ATCGGGCTTTGTTTCTTGGGGCAGTTTCACTTCAGTAGAGAGAAGAATTCTTCGAAGCAAGAGGTTGCATATAGTTAAAT CGCAGTGGTTAGAGGATTGTTTGAACAGTAGCCAAAGATTACCAGAAGATGCCTATAGCTTGAGACCCGATGGAATAGAA GAATCAACTACTGAAGATTGGTAAGTTTATGCATGTGCAGCATTTACAGTCTCTGACTTATGTGGATGGCAAGTATGAAA TTTGTGTGAATGTAATTGCTTTAATACTTTTACTCATTATATGTTCCTCACAAGTTCTGTCACCTGTAGTTGTGGTATTT TTCCGTCTTTTTTTTTCTTTGGGTGGTACTGCATAACATCTGTCTTTGACAGTAGATTGTCTTTTGGGGTTGGAAAATTT TAATAAATTCATGTTATGCTTAGGCTTTCTTAGTAGATTTGATACAAATTACTGAAATGGGGGATGGATACTAGTTGCTA GGTTAATTATGTCATTTATAAAGAAGTGGAATAGAAAGACCGATAGCAAATATGAGATAAAGCTTTGCATATTAGTAGAA GACGTTATTGTGAACCATGGTCTAGTATATTGCAAACATTTTTTTTAACTTTCTAGTGTACTTGTGCTGAAAATAATGGT CCACCATGCAGCAATTGCAAGTCTAGTGTCTTTAACTATAGTCAAATGTAGTTCTCTCTAAGAACTGTGCACTTGTATGG TTCCTATATTTTTCTTAGCATTTGATTGTTTTTTGCTATCTGTTGTAGTGAATATGACTTGGCGTTAGACACCCATCTGG TTGGAGATAATGTAGAGGACCAAAATACATCTTTCTCTGACCTTGAAAGTAAACATAGAACTGCAAAAGCTGCTAATGAA CCAAGTTTGGCTTCGGTGTCCCAGGAGAAGGGTGGCGGAAGGAAAAGAGGAAGACCTGCAGGCAGAGGTACCAAAAACGT AAAAACAGCCGGTAACCAAGCTCCCAGAGGCAGAGCACGAGCACAAGTTGCGAGAAAGCGGCCTAAAATATGTGAATATG AATCAGATGATGACAGGGATTCTCAACAAATAAGACCACAAGGGCAAGACACAAGAGAAGGAGGTCTTAATTTTAATGAG AAGCATTTAGAACCCCATGAGACCAAGAAACCTGAAAATGTTCAAGATACTGAAACCGTTGAAAGTTCTCAGCAAAACGA GGCATTCAAGCCAGAGGATTCGAAGGAAAGAGAATTTGAAAGAATATTTGTTCCTGAAATCGAAATGACTGATAGGCACA ATGGCCATAACAGTCAGGTGAGTGAGAAACTTGAAATTTTGGCAGATCCCGTGCAGGCCATGTTATTTGACATGATTCCT AGCCTTGCCCCCAAGAATGTTGAGCAACCTACGGCGAGTCATCGAGAAGAGAAGCTTCCTTCCAATGCAGATTCAACTAC TGCTACTACTACTAAGAAAAAGAAGGTTAGCTACAAGGCTATTGCTGCCGAGCTGCTCAAGGACTGGTAGAACATCAATT TACATCAATGTATTACTAATTTCTGAATGTGTGCCAAAAGTTCCTTTGTTAGATCAAATTGATTGTTACCCAAGTGTTTC TGTTTTGGTCCGTTATTGTTATTCAAATGTTAAATCAGGTTTTCTTTGATCATGGACTTGTATGATTAGTGTGGTATATC TTAGAAAATCATATGTAAGTTTTGTATTTTTACCCTTAAATTATAGAAATTTACTCTCCTCGGTCCCCTCTTTATTTGTT CTTTTTT
CDS sequence (LotjaGi6g1v0235200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGACGGAGCAGACGAAGTTCAGCGTGCTCTGCAGCCTATTCACATGGACGCAGAGAACCAAGTCGCCGGCGAAGAA GCGTTCCAAGTTCCGCAAGTTCCTCGACTCCTTCTGCAGAGACGCTAACTACTTCCCCGCCATTCGCCTCATCCTCCCTA ACCTCGACCGCGAACGCGGCTCCTACGGCCTCAAAGAGTCCGTCCTCGCCACCTCCCTCATCGACGCTCTCGGTATGGCT AGGGATTCTCAGGATGCTCTCCGCCTCATCAATTGGCGTAAAGGCGGTGCTAAAACTGGTGCTAGTGCCGGCAATTTCGC ACTCGTCGCCTCTGAGGTGCTGCAGCTTAGGCAAGGGACTGCTTCTGGTGGTTTGACGATAAAGGAGTTGAATGACTTGC TTGATCAATTGGCTTCGAGCGAAAACAGGGCTGAGAAGAATCTGGTTCTTTCTACCCTTATCAGAAAGACAAATGCACAG GAAATGAAGTGGATTATCATGATAATTCTCAAAGATCTAAAGCTGGGAATTAGTGAAAAAAGCATTTTCCATGAATTCCA TCCAGATGCCGAAGACTTGTTTAATGTTACATGTGACTTAAAATTAGTTTGTGAAAAGCTAAAGGATCGGAACCAGCGCC ATAAACGGCAGGATATTGAAGTTGGAAAAGCTGTGCGCCCTCAATTAGCTAAGAGAGTTGCTAATGCAGCTGAAGCATGG AAAAAGCTTCATGGGAAGGAAGTTGTTGTTGAGTGCAAATTTGATGGTGATCGCATTCAAATTCATAAAAATGGAACAGA GATACATTTCTTCTCAAGGAACTTTCTTGATCATTCTGAATATGCACATGCAATGTCAGCAATCATAATACAAAACATTC TTGTAGACAGGTGTATCCTTGATGGTGAAATGTTGGTCTGGGACACATCCTTGAATCGTTTTGCTGAGTTTGGCTCAAAT CAGGAAATAGCCAAGGCAGCAAGGGATGGACTTGATAGTCATAGAAAGTTATGCTATGTTGCATTTGATATTCTTTATTT TGGAGATACTAGTGTGATTCACCAAACTTTAAAGGAACGGCATGAGATTCTTCGTAGAGTCGTGAGGCCAATGAAGGGCC AATTGGAAATTTTAGTACCTAATGGTGGTATCAACAGTCACCGTTCTTCTGGTGAACCATGTTGGTCATTTATTGCTCAT AATGTGGATGAAGTTGAGAGATTTTTCAAAGAAACCATTGAAAATAGAGATGAGGGAATTGTTGTAAAAGACCTCAGCTC CAAATGGGAACCTAGTGATCGCAGTGGAAAGTGGCTGAAATTGAAGCCTGAATACATTCAAGCTGGTTCTGATCTAGATG TACTCATCATAGGTGGCTACTATGGCTCTGGACGACGTGGAGGAGAGGTTGCTCAATTCTTGGTTGGCCTTGCAGAGCGT CCATCTCCAAATACACATCCCAAGCGATTTATCTCCTTTTGCCGGGTTGGTACTGGACTTTCTGATGATGAGCTTGATGC TGTAATATCAAAACTAAAACCTTACTTCAGGAAGTATGAATATCCAAAGAAGAGGCCACCGAGTTTTTATCAAGTTACTA ATCATTCAAAAGAAAGACCTGATGTGTGGGTTGATAGCCCTGAGAAATCAATTGTTCTGTCTATAACAAGTGATATCCGA ACTATACAATCTGAGGTATTTTCTGCACCTTACAGCCTGAGATTTCCTCGAATTGACAGGGTGAGATACGACAAGGCCTG GCATGAATGCCTTGATGTGCAATCATTTATAGAACTTGTGCATTCCAGCAATGGTACCACACAGAGGGATACAGAGCATG GCAGCAAGCAGGACAGTAAATCAAATCGCATCAAATCCTCCAGACGGGGAGAAAAGAAAAACATGTCTATTGTTCCTTCC CATTTAATACAAACTGATGTTTCCAGTGTTAAAGGGGGGTCCTTAATATTTTCAAATATGATGTTTTACTTTGTAAATGT GCCTCCATGTCATTCTCTCGAGTCCTTGCACAAAATAATTGCTGAGAATGGGGGAACTTTCTCAATGAATTTGAATAACT CAGTCACCCATTGTGTTGCAGCAGACAGCAAAGGGTTTAAATTTGAAGCAGCAAAACGCCATGGTGATATCATTCATTAT ACTTGGGTATTTGATTGCTATGCACAAAAGAAGCTTGTCCCATTACAACCAAAGTACTTCCTGTTCCTATCTGAACTGAC AAAGAAGAAGTTACAAGAAGAAATCGATGAGTTCTCGGACTTTTACTATTTGGATCTTGATATTGGAGATATCAAACAGC TTTTAAGCAATATTCATAGGTCGGAAGATGTCAGCACTGTTGATCATTATAGGAAAAAATACTGCCCAAAGGATAAGTGG TCTTTCTTTTGCGGATGCTCCGTTTATTTCCACACTGTAATACCATCATTGAAAGAAGATTGGCAATTTCTATTGGGACT TTCTTTGAGGAGATTCAAGCTCGAAGTTCTCATGGGTGGTGGAAAAGTTGCTGATAATATTAATTGTGCTACTCATCTAG TGACTTTGTTTGTGCCAAGATGTCATACTAACTTTTGGGAAGAAATTCAGAGTAGTTTCACTTCAGTAGAGAGAAGAATT CTTCGAAGCAAGAGGTTGCATATAGTTAAATCGCAGTGGTTAGAGGATTGTTTGAACAGTAGCCAAAGATTACCAGAAGA TGCCTATAGCTTGAGACCCGATGGAATAGAAGAATCAACTACTGAAGATTGTGAATATGACTTGGCGTTAGACACCCATC TGGTTGGAGATAATGTAGAGGACCAAAATACATCTTTCTCTGACCTTGAAAGTAAACATAGAACTGCAAAAGCTGCTAAT GAACCAAGTTTGGCTTCGGTGTCCCAGGAGAAGGGTGGCGGAAGGAAAAGAGGAAGACCTGCAGGCAGAGGTACCAAAAA CGTAAAAACAGCCGGTAACCAAGCTCCCAGAGGCAGAGCACGAGCACAAGTTGCGAGAAAGCGGCCTAAAATATGTGAAT ATGAATCAGATGATGACAGGGATTCTCAACAAATAAGACCACAAGGGCAAGACACAAGAGAAGGAGGTCTTAATTTTAAT GAGAAGCATTTAGAACCCCATGAGACCAAGAAACCTGAAAATGTTCAAGATACTGAAACCGTTGAAAGTTCTCAGCAAAA CGAGGCATTCAAGCCAGAGGATTCGAAGGAAAGAGAATTTGAAAGAATATTTGTTCCTGAAATCGAAATGACTGATAGGC ACAATGGCCATAACAGTCAGGTGAGTGAGAAACTTGAAATTTTGGCAGATCCCGTGCAGGCCATGTTATTTGACATGATT CCTAGCCTTGCCCCCAAGAATGTTGAGCAACCTACGGCGAGTCATCGAGAAGAGAAGCTTCCTTCCAATGCAGATTCAAC TACTGCTACTACTACTAAGAAAAAGAAGGTTAGCTACAAGGCTATTGCTGCCGAGCTGCTCAAGGACTGGTAG
Protein sequence (LotjaGi6g1v0235200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTEQTKFSVLCSLFTWTQRTKSPAKKRSKFRKFLDSFCRDANYFPAIRLILPNLDRERGSYGLKESVLATSLIDALGMA RDSQDALRLINWRKGGAKTGASAGNFALVASEVLQLRQGTASGGLTIKELNDLLDQLASSENRAEKNLVLSTLIRKTNAQ EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAKRVANAAEAW KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYAHAMSAIIIQNILVDRCILDGEMLVWDTSLNRFAEFGSN QEIAKAARDGLDSHRKLCYVAFDILYFGDTSVIHQTLKERHEILRRVVRPMKGQLEILVPNGGINSHRSSGEPCWSFIAH NVDEVERFFKETIENRDEGIVVKDLSSKWEPSDRSGKWLKLKPEYIQAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAER PSPNTHPKRFISFCRVGTGLSDDELDAVISKLKPYFRKYEYPKKRPPSFYQVTNHSKERPDVWVDSPEKSIVLSITSDIR TIQSEVFSAPYSLRFPRIDRVRYDKAWHECLDVQSFIELVHSSNGTTQRDTEHGSKQDSKSNRIKSSRRGEKKNMSIVPS HLIQTDVSSVKGGSLIFSNMMFYFVNVPPCHSLESLHKIIAENGGTFSMNLNNSVTHCVAADSKGFKFEAAKRHGDIIHY TWVFDCYAQKKLVPLQPKYFLFLSELTKKKLQEEIDEFSDFYYLDLDIGDIKQLLSNIHRSEDVSTVDHYRKKYCPKDKW SFFCGCSVYFHTVIPSLKEDWQFLLGLSLRRFKLEVLMGGGKVADNINCATHLVTLFVPRCHTNFWEEIQSSFTSVERRI LRSKRLHIVKSQWLEDCLNSSQRLPEDAYSLRPDGIEESTTEDCEYDLALDTHLVGDNVEDQNTSFSDLESKHRTAKAAN EPSLASVSQEKGGGRKRGRPAGRGTKNVKTAGNQAPRGRARAQVARKRPKICEYESDDDRDSQQIRPQGQDTREGGLNFN EKHLEPHETKKPENVQDTETVESSQQNEAFKPEDSKEREFERIFVPEIEMTDRHNGHNSQVSEKLEILADPVQAMLFDMI PSLAPKNVEQPTASHREEKLPSNADSTTATTTKKKKVSYKAIAAELLKDW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 219 | 219 | 9.6E-67 | ||
| SUPERFAMILY | 4 | 209 | 206 | 2.48E-6 | ||
| PANTHER | 4 | 1169 | 1166 | 0.0 | ||
| PANTHER | 4 | 1169 | 1166 | 0.0 | – | |
| Pfam | 7 | 187 | 181 | 9.0E-37 | ||
| TIGRFAM | 62 | 600 | 539 | 6.0E-104 | ||
| Coils | 127 | 147 | 21 | - | – | |
| SUPERFAMILY | 186 | 443 | 258 | 8.87E-46 | – | |
| CDD | 215 | 447 | 233 | 1.95846E-82 | – | |
| Gene3D | 221 | 444 | 224 | 5.4E-63 | – | |
| Pfam | 227 | 442 | 216 | 8.2E-44 | ||
| ProSitePatterns | 251 | 259 | 9 | - | ||
| SUPERFAMILY | 287 | 741 | 455 | 1.24E-20 | ||
| ProSiteProfiles | 336 | 479 | 144 | 27.206 | ||
| ProSitePatterns | 418 | 442 | 25 | - | ||
| Gene3D | 445 | 606 | 162 | 1.4E-41 | – | |
| CDD | 449 | 593 | 145 | 3.61638E-44 | – | |
| SUPERFAMILY | 450 | 601 | 152 | 2.57E-26 | ||
| Pfam | 466 | 585 | 120 | 6.5E-14 | ||
| MobiDBLite | 604 | 635 | 32 | - | – | |
| MobiDBLite | 611 | 635 | 25 | - | – | |
| ProSiteProfiles | 652 | 740 | 89 | 17.179 | ||
| SMART | 654 | 730 | 77 | 1.1E-9 | ||
| Pfam | 654 | 737 | 84 | 7.2E-16 | ||
| CDD | 656 | 742 | 87 | 1.36031E-25 | – | |
| Gene3D | 668 | 781 | 114 | 3.0E-27 | ||
| SUPERFAMILY | 792 | 913 | 122 | 5.09E-11 | ||
| Gene3D | 799 | 911 | 113 | 4.3E-14 | ||
| CDD | 803 | 899 | 97 | 3.23747E-7 | – | |
| SMART | 815 | 901 | 87 | 9.7 | ||
| ProSiteProfiles | 840 | 911 | 72 | 12.004 | ||
| MobiDBLite | 943 | 1079 | 137 | - | – | |
| MobiDBLite | 1006 | 1027 | 22 | - | – | |
| MobiDBLite | 1036 | 1057 | 22 | - | – | |
| MobiDBLite | 1127 | 1155 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA ligase activity | Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+. | ||
| Molecular function | DNA ligase (ATP) activity | Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Biological process | DNA recombination | Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | ||
| Biological process | DNA ligation involved in DNA repair | The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA repair. | ||
| Biological process | DNA biosynthetic process | The cellular DNA metabolic process resulting in the formation of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one. |
Expression pattern of LotjaGi6g1v0235200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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