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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0310200 |
| Transcript ID | LotjaGi6g1v0310200.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cullin, putative; TAIR: AT5G46210.1 cullin4; Swiss-Prot: sp|Q8LGH4|CUL4_ARATH Cullin-4; TrEMBL-Plants: tr|A0A0S3S3A0|A0A0S3S3A0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0310200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62898708..62907853) extracted from Lotus japonicus Gifu genome v1.2.
CTGAACCAAACCAAATTTAAAAATTTTGGTTAGATCGGTTTCTGATTCACCTGAAACCAATTCAAACTGAACCTCGAACA CCCCTATATCAAACATTTTTACAAAAATACTAAAATGCAAAAAAAGAAGAAATTTATTACCAAAAAAGAAATGTCCATGA GAAGGTTCACCTCACCCTGGCCCCGATCTGATAGATTAATCTCTAGTTAGAGAGAGAGAGAGGCTTCTGCAAGTCCAAGC TGCAAACACAAGACAAGCACGATGGTGTGTTGATTCATTTTGATGAGTTTCTTACTCATTTCATGTCTCTCCCCACCAAA CGTTCTGCTTCTGCTTCTTCTTCACCCACCACCGCCGCCGCCGCTCCTATGAAAAAGCAAAAGCCCCTTTCCTCCCACTC CGACTCCGACTCCGCCGCCGCCGCACTCATGCCCCTCGACGACGATCTCAAACCCTCCAACGCCGTTGGTCTCATGGCCG CCAATCTCGCCCGCAAGAAAGCTACCCCTCCTCAACCCCCCAAAAAACTCCTCATCAAGCTCCACAAAGGTAATAAGGGT TTTTCAATTCTCCCTCATTTCGAGTTCCTTTTCCTCTTTTCAACGCTCTTCTCATTCCTCACCACTCCAATTGTGTTTAT CCATCGCTAATTTCGTCATCGCTTTAAGCTTTCATGAGCTGGAAACTAACACTGCCTAACCCATTAGCTCACTCATTCTG TACTAGCTCATCCAAATTAGTAATTGTAGGTTCAGCTATAGTTATACTATGTGATTTAATTTTCAATCTAGATTCTGGGT CTTGTGATTATGTTTAATTTGCCTATATAAATTAACATGTGCTGTTGTGTGAGCTTGTAGTTTCTCTTATTTGCTCATAC TTTCCTGTTTTTGTTTGGAAGCTAAACCAACATTGCCGACGAATTTCGAGGAGGATACATGGGCAAAGCTGAAGTCAGCT ATTTGTGCAATATTTTTGAAGCAGCCGGACTCTTGTGACTTGGAGAAGCTTTATCAGGTGATCATGAATGAAAGTTTTCT AGTTATTGTTATTATTATTATTATTATTTTAAGGTGTTCGTTCATTAAACGCTGTGAATATTTATGGCATTGGCTTATTA TTAGCTTTTAATGGTGAGCTCGTGATATTCATAGGCTGTGAGTGATCTCTGCCTTTATAAAATGGGTGGAAATCTTTATC AACGGATTGAAAAGGAGTGTGAAGTGCACATATCTGCAGCGCTGCAGTCTTTGGTCGGACAAAGCCCCGATTTGGTTGTT TTTCTATCTCTAGTTGAGAGATGTTGGCAGGACCTTTGTGATCAAATGTTGATGATTCGTGGTATAGCCTTGTATCTGGA CAGGACGTACGTGAAGCAAACAGCAAATGTTCGGTCATTATGGGACATGGGCTTACAACTTTTCCGTAAACATCTTTCGT TGTCTCCTGAAGTGCAGCACAAAACTGTTACTGGTCTTCTAAGAATGATTGAAAGTGAAAGGTAAATCCATTTCCTTGCA ATCTCAGTTCTATAAATGACTGATAGACCTTTGCATATATGCGAATCATATCAGATGTTAAATGCTGCCATACACGTTTC AGAACTAAACACATTCGCCTTTCCTGTATATAGTTATATACCTTTTTGGTTAGACTGTAAGATATGTTGAACTAAGATCG AATGATAAATTTTGAGACTTTTGCCTTTGTTAATGAGTAAAAATATTAATCAGTCAAGCTTTGTTTTTGGGATGGCTATT CAAATCTGCATACAGTTCCAGGGTAGTGGCCATTTAATTTTTAGGTTAGAAAAATGACCTAGGGTGATCACTCTTTCTGC TTCTTATTCTCTAAAGCAAGGGATAATCTCTTGCACATGTAAGGTAGGATTGGAAGATTCTTATTTCTTATTGTTATGAA TGAGTTTGTTCATAGTTCTGCTCTCCTTCTTTTTTATATGATTTCCCTGCTCCTCAACAATATAGTCTTTAGATTGTCCA CTAAATTATCGGTTGCCAGTTACCTACTTCTGTTGCTACCCGTCTTACCCTCACTGTCGCAACTCTCCTGTAAATCCTAA ATTTGATATAAAAACCATTCATGTGTTTTGACCTAATAATTTAAGCTTTTTGGATATGGGTTCATGGCATAGTATCCAAG CCTCTCTGAGTCCAGCGTTCAGTCCTTGTTGCACCCATTCTTCTACATTAAAATTTAAATTTCCGCATAAGGTTGGGTGA ACACGTGTGCATTGTTCATGCTTAGCGCTTCAGGCCCAAAGGCTCTCAAATGAGGGGATGTGTTAGATATAAAACCCATT ATAGTTCAAGCTTTTCAGGTTGATGACATTATGAATAAGCTGTAAGGTTATCTTTATCATTTTGTAACTAAAAAATATCA TTGCAACTTACTCCTTGCAATTATTTATTATGTATCTTTTTTACTATTATTTTCTTGGTTTGTAGCTCCAGATTTTACCA GATCATTTTATTTTTGGTATTAGAAATATTGTGTAAGTTTGTCTGCCGATATTGGTTTATCACATGAGAAGATTTATTGC TGACCAACAATTTTCTACTGATCTATGTGATCACTTCAGCTGAACATCTGATCAGAATGTGCTGGGAAAGTCAACTGTTA TTTCGGATGTGGAATATACAAACACTGTGTTTTATTGACATCTGGCATCCATTGCATAATCTAAGGCATTATTTTCTTAT TGCGATTTTAATATTTGTTCAATTAGTTGTGGAATACAAGTGTTAGGAGAAGTGGTACTTGCAAAAAATTGCTGTACTTT ATCAAACTTCGCGAGGTTAGTTTATTTCATAGTAATTAAACCTAGCCTGATCTGATTGAATATAAAGCTGGTGAATGTCA AGGACTGGTAGATGTTTAATTTTCAGAGAAGTCATACAATGCTAGAATATTAAGGAAGAGTTCGTTAGGAAATACCATCT GATCTGCTACAAGCCTACAACTTAGGTAAATACAAAGGAGAAAACAAGGGATAAAAAAAACTGGAACATAATTCTGATTT AAATCGGATTCCAATCTTATTCTTTTTCAATCTAATCTTTCCAACTTTCCTTACAATCTTCTACAAGATGCTTGTAGTTT TGCTGTTGTAAAATATAATGATATTGAAGCCATTGTTAGTAGTTGAGGTACAAAAGATAATTCAGCAAACTTTACTGGCT TGAGTAGTCTCATTATAAGGATGTATGCTAAGTAAGGGGCTAGGTTAGTATTTCCATTATATTTAAATGAATTTGACCCA ATAAAAGTCTATTTCAATGTTGACACCTTCAAGTCAGGAACTTAGATACTTCTTTTTCTCTCTTGATCATCATTTGTGAT TTTGGGCATTACATTTTCTCTCTTAATACAGAAAACGTAGCTGGTTGATCCACCTATTCCTATTTATACAAGGCCATCAA ATTCTTCATCTAGTGTTGTACATTACAATTTTCACTCGTCTTGTTTTTCAGATTAGGTGAAGCTGTGGATAGAACTCTTC TAAACCATCTTTTGAAGATGTTTACTGCTCTAGGAATTTATGCAGAAAGCTTTGAGAAGCCATTCCTTGAATGCACATCT GAATTTTATGCTGCGGAAGGTATGAAATACATGCAGCAATCAGATGTTCCAGATTACTTGAAGCATGTGGAGGTGCTTAC TTTTCATTATCCTCCCTGTATTATCTTGTTAGCTTTCATTAATTTAAGTATTTCTTAAATCAATGGATCTTGTCATGCCA TTTCAGGATTTTATCGGACATTCTGACTTTAATTTGTCTTTTTTGGTATATTCAATCCTTCCCATGTCCAGCATTGTATG CTTACTGTAGGGATATTTTTGGGTACTCATTTGTGCAGACTAGGTTGCAAGAGGAACATGATAGATGTTTGATCTACTTG GATGCAAGTACTAGGAAGCCATTGATAGCAACAGCAGAAAAACAACTTCTTGAACGTCATATACCTGCCATTCTTGATAA GGTTCCGATCACCACCCACTTCTTGATTTTTCTGTCATGATTTCTTTTTTCATTTTGTTTCACATTGCTTCAAATTTACT TCGTGTTACAGGGTTTCTCTATGCTTATGGATGGGAATCGCATTGAAGACCTTCAGAGAATTTACTCACTCTTTTCAAGG GTCAATGCCCTTGAGTCACTGAGGCAGGCCATTAGTTCATACATCAGGAAAACTGGGCAGGGCGTTGTTATGGATGATGA GAAAGATAAAGATATGGTTTCTTCCCTTCTGGAATTTAAGGCTTCTCTTGACACGATATGGGAAGAAAGCTTTTTCAAGA ATGAAGCTTTCTGTAACACCATTAAAGATGCATTTGAGCATCTTATCAATCTCCGGCAGGTACTTCCCATTTTGCTGTTG TCATTTCCATATTTTTGTTGGCTAGTTTCCATACTGAAATTTTTGAAATATCTCAAGATAGAAAGCTCCAGCCAATAAAT TTTGGGTCAACTGACTGTTATCTTATTTTTTTCTGCATGGTAGAACCGACCTGCGGAGTTGATTGCCAAGTTTTTGGATG AGAAGCTTCGTGCGGGTAATAAGGGAACTTCAGAAGAGGAATTAGAGGGCACACTTGATAAAGTTCTGGTGTTATTCAGG TTCATTCAGGTAAGCTCAATATTTCATTGGTGGAGTAACTAACATCACACCATGTTTCCTGTATTTTTCATTCGTGCTCA TGGTGATATTTCACTTTTCTAGATATATTTCTCTTCCATACTGATATTGTCAAGACTACTTGATGTTTTATTGTTAAGGG CAAGGATGTGTTTGAGGCATTTTATAAGAAAGATCTTGCTAAAAGACTGCTGCTAGGAAAGAGTGCTTCTATTGACGCGG AGAAATCTATGATCTCCAAGGTTAGGGCTTATCTTTTACATTTAACTTTTGAAACAATTAGATGGTTCCTCAGCAGAATT TTATTAACAGATTTCTTTGATTACAGTTGAAGACCGAGTGTGGCAGCCAGTTCACAAACAAACTGGAAGGAATGTTTAAG GTAATACATCTTTGAATCAATTTATAACTTGGAAGTTTTAAGGACTCTTTGATTGACTGGGTTGAAATCATCTATTCCAA CCTCAGTTTTTTCCTATGTATTTTTCCTTGGCTTAGAAAGGTGACTATGAATTTGAACCTGGTGAGGAATTATCTTTTAT GATTTGATGATGAATTATCTTTGAATCCAGTTCTGTTTTAACAATGTTTTGACCAACTTCATGAATTACTATAGCTTCTT ACAACTTCGTCAAAAATTGTTCTGATTCAGGACATTGAATTATCAAAAGAAATAAATGAGTCCTTCAAACAGTCCTCCCA GGCGAGAACAAAACTTCCATCAGGGATTGAAATGAGTGTTCATGTCTTGACAACTGGGTAAGCTACGTGTTTCCCCTTTC TTATCTGTTTTCATCAATAATGTTTATGTGCTTCTTTTTTCCAGAGAATCTAATTGGAATAGTCGGATGATTGCAGGTAC TGGCCAACATATCCACCCATGGATGTTAGACTTCCTCATGAATTGAACGTTTACCAGGTTCAGCACAAGCCATGAATAAA TGCTCTTTTTACTGTTGGTTTCCTTGATACTTATAACTTCTCTGACATGGTCCTTTCCTTTATTCCTTAAGGATATTTTT AAAGAGTTCTATCTAAGCAAATACAGTGGAAGGCGTCTAATGTGGCAAAATTCGTTAGGTCACTGTGTCCTGAAGGCAGA TTTTCCCAAAGGGAAAAAGGAGTTGGCTGTCTCCCTGTTTCAGGTTGGCCTTTCGAAAACCATTAATCCTTTTGTATCTT CATTTCCTGTCACTGTCTATCTTGTTTGAATTGAACACATTATTCTGGGATTAATTCTGCATGACTGGCTGTGCTCCAGA CTGTTGTTCTGATGCTATTCAATGATGCCGAGAAACTTAGCTTTCAAGATATCAAGGACTCTACTAGTATTGAGGACAAG GAACTGAGAAGAACTCTGCAATCACTTGCCTGTGGAAAAGTTCGTGTTCTTCAAAAGGTGTGTTTGTAATCATTTGCAGA ATTATCAGTTTATAAAATTTGTTTGCAACTATGTAGTTTCTAATGTTGATTCTCTTTGTTGAATATGTAACAGACGCCAA AGGGTAGAGATGTGGAGGATGATGATTCATTTGATTTTAATGACGGGTTTACTGCTCCTCTTTACCGGATAAAGGTAGCA ATATCCATCGCTTTGGACATTAGAGATCAGATTAACTGATCTCAATCTTTGATTTGTGTTTTAATTCCGAATACCATAGC CAGCCCTTTAGCAGTGATAAATGCTTGTGGTGGGTTAGTCCTCTAAATTTATGACCACAAGTTTAAACTAATTTTGGTGT ACATGGTGTAGGTGAATGCAATTCAGTTGAAGGAGACCGTGGAGGAAAATACAAGCACCACTGAGAGAGTTTTCCAAGAC CGTCAATATCAGGTAAAATTTCTTTTCTCTAAAACCTTCCTTTTAGTTCAGACTTTAGAGGGACTAAATGTCCAGGGGAA TGTAATGCACCTTCAATACAGAAGAACCTAATATGCTCGTGCATTATACTGGCTATTAGTTTTACCATTTTACACTCGTT AGTTTTATTTTACAAAATATGACAAGTAATAAATTGTATCGATGTCCTTAAATTTTCAATATGAAACCATTTTCATGTGT CGTCATCTAACAACTTAAACTAGGGGGATAATTGGTTCATGATTTGGTGTCAAATTCTCTATACTAGGTTGTTTATTGGT TGATTGATCCTTGTTTCCCTATTCTTCTAATAAAAAAATTAAATTTCACCACAAGATAGGTGGGACTATACATTGTCCAC ACTTTGAAGTCCAAGTGGCTCATGTGATGGGGGCATGTTAGAGATGTCAATACTGAATATAAAACCATTCAAATATCTTC CACTAACAACTTATGATTTTGTGATAGTTTGTTCATGTTCATAACCTATTATCCTTGTTGGCGTGGTTTATTGCAGGTTG ATGCTGCTATTGTGAGGATAATGAAGACTAGGAAAGTGCTTAGTCACACACTTCTTATTACTGAACTCTTCCAACAGGTG ACATATTTACATCTTCCCTTTCTTTAATTCAAATGGAAACTGAATCCCGAAATTGTTCAATGTTAGTATTGTAGGCAAAG CTATTTTTCCAGTGTTACTGCTGATAAATTCTAACGTAACTTATGCTTGACTTGGTTGTGGACAAGTGAAAGCTTATTTA GACTGTTCTATATCTGATCATTAGGATAAATAGTGATTTGTCTTTTTTTTTTTCCTGAACAGCTCAAGTTCCCAATAAAA CCAGCTGATTTGAAAAAAAGGATTGAAAGCCTGATTGACAGAGAGTACCTGGAGAGGGACAAGAACAACCCTCAAATATA CAATTACCTGGCATAGCATATTTACCTCATTTTACAATTGTTAGTCTCTCTTTTTCTCTTAAATGGCATGGGAAAAGCTT GATGTTTAATCCCTTGTCATGTATGTACAGTAACAACGGACCTCCCCCCCCCCCCCAAACCTCTTTTTATTTTTGCCATT TTCATTTATCGACAACTGCACTTTACTTGTAAAGTATATTTTTCCCCTTTGAAGTTATTTTCATTTTTTTACAATTCAAA ATTATTCCCAAAATGATTAAGAAATTCAGAAGAATTGGCAGCTTTTTTATTTCTGTTAGACGAATTGGCTTAGTTTGGAT ATCCTTTATGGTTGTTATCATGTACTTCAAGACATAAAGTGACCAGAACTCCTCTAATGGATTAAGATGGAAATTTGTTC ATGTTGCACTCAACTGATGATCATACATATTTGAGAGTTTATTCTTGCAGGAATCTTTTTCTTCTGAAAGAGTGAGATGA TAGTTACTCCCCACCCTCTCTTTGGAGGGAACCTGTGCAGTCTTTTCTATGTTCTTGAAGTTTTGAAACTCTGTTTTAAC CTTTTTTTGATGAAATTTACAAAATATAATGTTTAAATATGTTTTTATCCATGTATGTTAGTTTTTACTCTCAATCTTTC TTTTTTTGTTTGTGAGTTGACTTATTTACTAAAAGTAAGCTAGTCTAGTCCCTAAAGCTAAAAGGACATTTGTTAAGCGT TGATATGGCTAATGGAAGACCATATATACACTACTTTCTTCTCTTCCATGAGAAAAAAACGGTGTAGGTGGAATCTAGCA TGTATTAACCAATAATAACAATCTATCCAATAAAAACGGTAGACCATATATTAACCACTTTGTAAAACTTACAAAAGTAC TAAACTTACCTTTTCCATCCCAATAATAACAATCTGACCCTCACTGAGTTTGGACCACCGCCGCCATGAACTTTTTTTTT TGATAATATGGAGGGCCTAGGCCCAGCCGCCATGAACTCTTCATCTCCATCTTCTTCATAAAAATTCAGATTTTCTTTTA CACCTTCGTCTCTTCATCTTCATGGCGAAAAACCATACCACAATAAACAAAAAAATGTGAAAATGATTGATATGTTTTCT TCCAAATCTTCTTTCCAAATACCTAAACCGCAATAATCAAGATTTTCTTGCCAAATCGCTCGTTTTCTTCCAAATCTGAC CCAAACGTGAAAAATCAAATTTTGCTTATTACAGCCCAGGAGAATAATTATGCCAACCATATCTTCGTCTCTTCGTTCTT CTTGCCAACCCGATCTTGCCAACCCAAATATGTTTTCTTCTTCATCTTCTTCGTCCAGATTGAAGAGAAAGCAACCTCAT CGCAGCAGATTTGCTAACCTCCATCACAACAGGTGGAGAGGAAGCAACCGATTTGATGACCTAGGAGATCAGGTTGATTT GATTTAATTGTACCGCCATATGTTGTACCGTCAGATGTCGAGCAACATATATGATTTAATTGATTAGTGATGGTGCGACA GTCATGAAGTTTTCCGACGACAACATCATCTTTGAAGGTGATGAGTGTGTGGGAGAGCAAAGGTTTTTTTTTTTGTTGAT CGGCCAAATTTCTCTAGGGATTGAACAATGGACCTTCCCCTCCCCAAGCCATATGCCCCACAGCTCTTATCACTTGAGTA TTCTTCGAGGACGTGGAAGAGCAAAG
CDS sequence (LotjaGi6g1v0310200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCTCCCCACCAAACGTTCTGCTTCTGCTTCTTCTTCACCCACCACCGCCGCCGCCGCTCCTATGAAAAAGCAAAA GCCCCTTTCCTCCCACTCCGACTCCGACTCCGCCGCCGCCGCACTCATGCCCCTCGACGACGATCTCAAACCCTCCAACG CCGTTGGTCTCATGGCCGCCAATCTCGCCCGCAAGAAAGCTACCCCTCCTCAACCCCCCAAAAAACTCCTCATCAAGCTC CACAAAGCTAAACCAACATTGCCGACGAATTTCGAGGAGGATACATGGGCAAAGCTGAAGTCAGCTATTTGTGCAATATT TTTGAAGCAGCCGGACTCTTGTGACTTGGAGAAGCTTTATCAGGCTGTGAGTGATCTCTGCCTTTATAAAATGGGTGGAA ATCTTTATCAACGGATTGAAAAGGAGTGTGAAGTGCACATATCTGCAGCGCTGCAGTCTTTGGTCGGACAAAGCCCCGAT TTGGTTGTTTTTCTATCTCTAGTTGAGAGATGTTGGCAGGACCTTTGTGATCAAATGTTGATGATTCGTGGTATAGCCTT GTATCTGGACAGGACGTACGTGAAGCAAACAGCAAATGTTCGGTCATTATGGGACATGGGCTTACAACTTTTCCGTAAAC ATCTTTCGTTGTCTCCTGAAGTGCAGCACAAAACTGTTACTGGTCTTCTAAGAATGATTGAAAGTGAAAGATTAGGTGAA GCTGTGGATAGAACTCTTCTAAACCATCTTTTGAAGATGTTTACTGCTCTAGGAATTTATGCAGAAAGCTTTGAGAAGCC ATTCCTTGAATGCACATCTGAATTTTATGCTGCGGAAGGTATGAAATACATGCAGCAATCAGATGTTCCAGATTACTTGA AGCATGTGGAGACTAGGTTGCAAGAGGAACATGATAGATGTTTGATCTACTTGGATGCAAGTACTAGGAAGCCATTGATA GCAACAGCAGAAAAACAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGTTTCTCTATGCTTATGGATGGGAA TCGCATTGAAGACCTTCAGAGAATTTACTCACTCTTTTCAAGGGTCAATGCCCTTGAGTCACTGAGGCAGGCCATTAGTT CATACATCAGGAAAACTGGGCAGGGCGTTGTTATGGATGATGAGAAAGATAAAGATATGGTTTCTTCCCTTCTGGAATTT AAGGCTTCTCTTGACACGATATGGGAAGAAAGCTTTTTCAAGAATGAAGCTTTCTGTAACACCATTAAAGATGCATTTGA GCATCTTATCAATCTCCGGCAGAACCGACCTGCGGAGTTGATTGCCAAGTTTTTGGATGAGAAGCTTCGTGCGGGTAATA AGGGAACTTCAGAAGAGGAATTAGAGGGCACACTTGATAAAGTTCTGGTGTTATTCAGGTTCATTCAGGGCAAGGATGTG TTTGAGGCATTTTATAAGAAAGATCTTGCTAAAAGACTGCTGCTAGGAAAGAGTGCTTCTATTGACGCGGAGAAATCTAT GATCTCCAAGTTGAAGACCGAGTGTGGCAGCCAGTTCACAAACAAACTGGAAGGAATGTTTAAGGACATTGAATTATCAA AAGAAATAAATGAGTCCTTCAAACAGTCCTCCCAGGCGAGAACAAAACTTCCATCAGGGATTGAAATGAGTGTTCATGTC TTGACAACTGGGTACTGGCCAACATATCCACCCATGGATGTTAGACTTCCTCATGAATTGAACGTTTACCAGGATATTTT TAAAGAGTTCTATCTAAGCAAATACAGTGGAAGGCGTCTAATGTGGCAAAATTCGTTAGGTCACTGTGTCCTGAAGGCAG ATTTTCCCAAAGGGAAAAAGGAGTTGGCTGTCTCCCTGTTTCAGACTGTTGTTCTGATGCTATTCAATGATGCCGAGAAA CTTAGCTTTCAAGATATCAAGGACTCTACTAGTATTGAGGACAAGGAACTGAGAAGAACTCTGCAATCACTTGCCTGTGG AAAAGTTCGTGTTCTTCAAAAGACGCCAAAGGGTAGAGATGTGGAGGATGATGATTCATTTGATTTTAATGACGGGTTTA CTGCTCCTCTTTACCGGATAAAGGTGAATGCAATTCAGTTGAAGGAGACCGTGGAGGAAAATACAAGCACCACTGAGAGA GTTTTCCAAGACCGTCAATATCAGGTTGATGCTGCTATTGTGAGGATAATGAAGACTAGGAAAGTGCTTAGTCACACACT TCTTATTACTGAACTCTTCCAACAGCTCAAGTTCCCAATAAAACCAGCTGATTTGAAAAAAAGGATTGAAAGCCTGATTG ACAGAGAGTACCTGGAGAGGGACAAGAACAACCCTCAAATATACAATTACCTGGCATAG
Protein sequence (LotjaGi6g1v0310200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLPTKRSASASSSPTTAAAAPMKKQKPLSSHSDSDSAAAALMPLDDDLKPSNAVGLMAANLARKKATPPQPPKKLLIKL HKAKPTLPTNFEEDTWAKLKSAICAIFLKQPDSCDLEKLYQAVSDLCLYKMGGNLYQRIEKECEVHISAALQSLVGQSPD LVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGE AVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDASTRKPLI ATAEKQLLERHIPAILDKGFSMLMDGNRIEDLQRIYSLFSRVNALESLRQAISSYIRKTGQGVVMDDEKDKDMVSSLLEF KASLDTIWEESFFKNEAFCNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDV FEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHV LTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEK LSFQDIKDSTSIEDKELRRTLQSLACGKVRVLQKTPKGRDVEDDDSFDFNDGFTAPLYRIKVNAIQLKETVEENTSTTER VFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| MobiDBLite | 1 | 44 | 44 | - | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 55 | 792 | 738 | 0.0 | – | |
| PANTHER | 55 | 792 | 738 | 0.0 | ||
| Gene3D | 83 | 214 | 132 | 1.3E-38 | – | |
| SUPERFAMILY | 90 | 432 | 343 | 1.7E-109 | ||
| Pfam | 96 | 693 | 598 | 3.2E-208 | ||
| Gene3D | 217 | 331 | 115 | 1.2E-39 | – | |
| Gene3D | 332 | 434 | 103 | 1.0E-33 | – | |
| SUPERFAMILY | 433 | 703 | 271 | 6.28E-102 | ||
| Gene3D | 435 | 547 | 113 | 2.8E-45 | – | |
| ProSiteProfiles | 436 | 665 | 230 | 59.406 | ||
| SMART | 466 | 615 | 150 | 1.4E-75 | ||
| Gene3D | 552 | 708 | 157 | 6.4E-55 | – | |
| SUPERFAMILY | 704 | 792 | 89 | 9.8E-27 | ||
| Gene3D | 719 | 792 | 74 | 4.7E-33 | ||
| SMART | 721 | 786 | 66 | 1.6E-34 | ||
| Pfam | 724 | 784 | 61 | 3.8E-23 | ||
| ProSitePatterns | 765 | 792 | 28 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Cellular component | Cullin-RING ubiquitin ligase complex | Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity. | ||
| Molecular function | Ubiquitin protein ligase binding | Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins. |
Expression pattern of LotjaGi6g1v0310200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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