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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0314200 |
| Transcript ID | LotjaGi6g1v0314200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter B family protein; TAIR: AT4G18050.1 P-glycoprotein 9; Swiss-Prot: sp|Q9M0M2|AB9B_ARATH ABC transporter B family member 9; TrEMBL-Plants: tr|I1M1K8|I1M1K8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0314200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63247666..63252098) extracted from Lotus japonicus Gifu genome v1.2.
GACCCAGATGATCATGAAGGACATGTCAAGCCCAAAGTTGATGAAAAAGTTTCCTTTTTCAAGCTTTTCACCTTTGCGGA CAATCTTGACAGGACTTTGATGATCATTGGTGTCATTTGTGCCATGGCTAACGGGTGGTCACAGCCTCTCATGACTCTCA TTTTTGGGAAGCTAATCAACACTTTTGGCACCACTGATCCTTCCCACATTGTCGATGAAGTTTATAAGGTATAACAACAT CAAAATCCATTTGGTTTCTTGAATTATGAAATTAATGTCTAATCTGTGTTTGTTATATATTCACTATTTCATTAACATAG ATTGTGTTAATTTGCAAACTAACTTTCATGTCACTGGCATTTCAAACTCCAGGTTGTATGGTTGTTTGTTTACCTGGCTA TTGGGACTGGAATAGTATCATTTCTACGTAAGATGACACTTTTCTATTCCTCTTTGCTTCTTATTTGTTTGTTTCAGCTT TTCAAGATATATAATTGCAGCATTGTGATAGTAAGGTAATTTTTTGTTCATGCTGCAGAGGTATCATGTTGGATGGTGAC TGGAGAAAGACAAGCCGCACGGATCCGTGGCTTGTACTTGAAAACAATACTAAAACAGGACATTGCCTTCTTTGACACTG AAACCTCATCCGGAGAGGTGATTGGAAGAATGTCTGGTGACACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTATGC TCCTTTCTTGTATATTGTAGTTGAGACCAGGTATCGACTGCTGACAGCAGTGACTAATCCAATGATTATATATAGTCATG CTCCTTTCTTGTATGGAAAGTGATAAGTATCAACTTGTTTTATATATACTCATGATATTTTATCCTCCCATTCTTTCTAT TACATGTATGTTTATGATTTCTAGCTCTCTGATTTAAATAGAACTGAGAAGGATTTTGACAAAAGAAAAGTAAGAAAAGA CAAAGATAATGAGCTGACATGAGGTTAATTAATGGCAGGTTGGAAAGTTTATACAACTTGCTTCAACCTTTATTGGTGGC TTCGTGATTGCCTTTACAAAAGGGTGGCAACTCTGTCTAGTTTTGCTTGCATGCATTCCTTGTATTGTCATTGTTGGTGG AATTATGTCAATGATGATGGCAAAAATGTCAAGCCGTGGGCAAGCTGCTTATACAGAAGCTGGAACTGTTGTAGAGCAAA CAGTTGGAGCAATTAGAACAGTAAGACACACAAATCAATTATAGATAAATTAATTAGCTTGTGTTGCTTTTATATTTAAG CATAGTCATTGATTTCATTATGATGTTTAACCAGGTTGCCTCTTTTACTGGTGAGAAAAAAGCAATTGAGAAGTATCATA ACAAGTTAAGAATTGCTTATAAAACTACGGTTCATCAAGGGTTGGCCTCAGGGTTAGGAATGGGAGTGCTTTTGATGATT ATCTTTAGCACCTATGCACTTTCTATGTGGTATGGTTGCAAACTTATTATAGAGAAGGGATACAATGGTGGAGATGTCTT CAATATTATCATATCAATTAATACTGGTGGAATGTAAGTGAGACAACATGTGATTGTATTTTAGTCCTTAGAGCTTGTTT ATGTTTATGTGTCAAACTTGACTTACTATTTATACTGTTAAACTAGGTCACTTGGTCAAACAACCCCATGTCTCAATGCA TTTGCATCAGGCCAAGCAGCAGCATATAAGATGTTTGAGACAATTAAGAGAAAGCCTAAAATTGATGCTTATGACACCAA TGGTGTTGTCTTGGAAGACATCAAGGGAGATATTGAGCTCAAAGATGTTTACTTCAGATACCCAGCAAGGCCAGAAGTGC AGATTTTTGCAGGATTTTCGTTCTATATTCCAAGTGGCACAACTGCTGCTTTAGTGGGTCAGAGTGGCAGTGGGAAATCA ACTATAATTAGTTTATTAGAAAGATTCTATGATCCTGAGGCTGGAGAAATACTTATAGATGGTGTGAATTTGAAGAGTTT TCAAGTTAGATGGATAAGAGAACAGATTGGGCTCGTTGGTCAAGAACCTGTCCTGTTCACAGCTAGCATCAAAGAGAACA TAGCATATGGTAAGGATGGTGCAACAGATGAGGAGATAACAACAGCTATAACACTTGCCAATGCCAAAAATTTCATTGAT AAACTGCCTCAGGTATAAAATTTGACACTCTTCACTTATACAAATGATTCCAACTTTTAGTTTTTTTTTTAAAGATTGTC TGAAACTAATAAAAATGTACAATTATGTTTTCAGGGCATTGACACTATGCTTGGAGGACATGGAACTCAAATTTCTGGAG GGCAAAAGCAAAGAATCGCGATCGCGAGGGCAATTTTGAAAAACCCGAGAATCCTTCTTCTTGATGAAGCAACAAGTGCA CTGGATGCTGAGTCTGAACGTGTTGTTCAAGAAGCATTAGAAAAAGTCATGACAAAAAGGACTACTGTAGTTGTCGCGCA TCGCTTGACAACTATTAGAAATGCTGACACCATTGCAGTGGTTCATCAGGGAAAAATTGTGGAAAAAGGTTAGACATTGA ACTACCTGTTTTAGCTCTTTTAATCAATGCTAGTTCTGCTACATATATGAAAAACTCTACTTTTTCTCATTACATACTAA AGTCAAATGTATTCAATTTGGTATTTTCTTACTTTGTATATAGGAACTCATGATGAGTTAATCAAGGATCCTGAGGGTGC TTATTCTCAGCTCATTCGTCTACAAGAAGGAGCTAAGAAGGAAGAAGGAAGTCGTAATTCTGAAGCAGACAAGTCCAAGA ACAGTTTTAGTTTAGAAAGTCACATGGCTAGATCTTCCACCCAAAGAACATCATTTGCAAGATCAATTAGCCAAGCTTCT TCAAGCAGTAGAGACTCTCTTTCACTTAGCTTTCCTCTTCCTTATCAAATTTCTGTACATGATTCTGTAGAAGGGGCTAA CGGTGATCACAAAAGTAGCGAACTTGATACTGTGAAGCGTCAAAAGGTTTCTATTAAACGCTTGGCCAAGTTGAACAAGC CTGAGGTTCCTATCTTACTACTTGGATCCATTGCTGCAGCAGCACATGGTGTTATACTCCCTATATTTGGCCTCTTGCTT TCATCAGCTATTAATACATTCTATGAACCTCCAGAACAACTTAGAAAAGATTCTGAGTATTGGTCACTTCTATTTTTGGG TTTGGGTGTTGCTACTCTGGCGGCTATACCAATCCAGAACTACTTATTTGGGATTGCTGGTGGAAAGCTCATAGAAAGGA TCCGGTCATTGACATTTAAGAAGGTGGTGCACCAAGAAATCAGTTGGTTTGATCATCCTTCAAATTCAAGGTATGTTATT ATGAAATTTACAATCATGAACCAATTATCTCAAAAGCTTAGGATATTGGATAAATAACACATGAATGGTTTATATTAGGC AAGAACTCATTAGGCTTTAAGCGGGGACAATGAACAAGCCCACCTGTCATGAGCTGAAACTCAACATTTTTAGAATAATG GGGTAACAAGAATCCAACTCTAGATTTATAGAGACTCTGATACCATGTTATGAACCAATTATCTCAAAATCTTAAGTTAT AGGGTAAATGACACTTGAATGTTTTTATATTATAATTCATTAATTCTAACATTTACTTCCAATCATGAAAGATAAAATAA AGACACATTTATTGTTATTTGTTAATTACTTCAAGTCATGCAACTCAAATGAATGAATATCCTTGCAGTGGTGCAGTCAG TGCAAGGTTAGCTACTGATGCTTCAACAGTGAGAACTCTTGTTGGTGACACCTTGGCCCTCATTGTGCAAAACATAGCAA CAGTCGCAGCAGGTATAATTATAGCATTCTCTGCTAATTGGAGGCTCTCTTTGGTAATTCTGGCCTTGTCACCTTTGATC CTTATGCAAGGGTTCTGTCAGATGAGGTTTCTTAAAGGATTCAGTTCAGATGCCAAGGTTAGCCTTACTTTCTGTTTTTT TAAGTGCATTCCATCAAACAATGGAATTACACAGTCTGTAAATCATGAGAATCTTCTGTGTCTTCTATATAGGAGAAATA TGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTGGTAGCATCAGAACTGTTGCATCATTTTGCGCAGAACCAAAGGTCA TGGATCTGTACCAGAAGAAATGTTCAGAGCCAACAAAACAAGGTGTTAGGTCGGGGCTTATTAGTGGTGCAGGATTAGGT TTCTCATTTTTTGCTCTATACTGCACAAATGCTGTCTGTTTCTACGTAGGATCTTATCTAGTGCAAAACGGGAAGGCCAC ATTTGGAGAGGTTTTCAAGGTACATACATAACTTTGTTTTCAAGGATCTTATTTGATGTTTCTTCTGAACTTAGTTCTTA CAATAAGTTTTGTGCAGGTTTTCTTTTCTTTGA
CDS sequence (LotjaGi6g1v0314200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATTGGTGTCATTTGTGCCATGGCTAACGGGTGGTCACAGCCTCTCATGACTCTCATTTTTGGGAAGCTAATCAA CACTTTTGGCACCACTGATCCTTCCCACATTGTCGATGAAGTTTATAAGGTTGTATGGTTGTTTGTTTACCTGGCTATTG GGACTGGAATAGTATCATTTCTACAGGTATCATGTTGGATGGTGACTGGAGAAAGACAAGCCGCACGGATCCGTGGCTTG TACTTGAAAACAATACTAAAACAGGACATTGCCTTCTTTGACACTGAAACCTCATCCGGAGAGGTGATTGGAAGAATGTC TGGTGACACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGAAAGTTTATACAACTTGCTTCAACCTTTATTGGTG GCTTCGTGATTGCCTTTACAAAAGGGTGGCAACTCTGTCTAGTTTTGCTTGCATGCATTCCTTGTATTGTCATTGTTGGT GGAATTATGTCAATGATGATGGCAAAAATGTCAAGCCGTGGGCAAGCTGCTTATACAGAAGCTGGAACTGTTGTAGAGCA AACAGTTGGAGCAATTAGAACAGTTGCCTCTTTTACTGGTGAGAAAAAAGCAATTGAGAAGTATCATAACAAGTTAAGAA TTGCTTATAAAACTACGGTTCATCAAGGGTTGGCCTCAGGGTTAGGAATGGGAGTGCTTTTGATGATTATCTTTAGCACC TATGCACTTTCTATGTGGTATGGTTGCAAACTTATTATAGAGAAGGGATACAATGGTGGAGATGTCTTCAATATTATCAT ATCAATTAATACTGGTGGAATGTCACTTGGTCAAACAACCCCATGTCTCAATGCATTTGCATCAGGCCAAGCAGCAGCAT ATAAGATGTTTGAGACAATTAAGAGAAAGCCTAAAATTGATGCTTATGACACCAATGGTGTTGTCTTGGAAGACATCAAG GGAGATATTGAGCTCAAAGATGTTTACTTCAGATACCCAGCAAGGCCAGAAGTGCAGATTTTTGCAGGATTTTCGTTCTA TATTCCAAGTGGCACAACTGCTGCTTTAGTGGGTCAGAGTGGCAGTGGGAAATCAACTATAATTAGTTTATTAGAAAGAT TCTATGATCCTGAGGCTGGAGAAATACTTATAGATGGTGTGAATTTGAAGAGTTTTCAAGTTAGATGGATAAGAGAACAG ATTGGGCTCGTTGGTCAAGAACCTGTCCTGTTCACAGCTAGCATCAAAGAGAACATAGCATATGGTAAGGATGGTGCAAC AGATGAGGAGATAACAACAGCTATAACACTTGCCAATGCCAAAAATTTCATTGATAAACTGCCTCAGGGCATTGACACTA TGCTTGGAGGACATGGAACTCAAATTTCTGGAGGGCAAAAGCAAAGAATCGCGATCGCGAGGGCAATTTTGAAAAACCCG AGAATCCTTCTTCTTGATGAAGCAACAAGTGCACTGGATGCTGAGTCTGAACGTGTTGTTCAAGAAGCATTAGAAAAAGT CATGACAAAAAGGACTACTGTAGTTGTCGCGCATCGCTTGACAACTATTAGAAATGCTGACACCATTGCAGTGGTTCATC AGGGAAAAATTGTGGAAAAAGGAACTCATGATGAGTTAATCAAGGATCCTGAGGGTGCTTATTCTCAGCTCATTCGTCTA CAAGAAGGAGCTAAGAAGGAAGAAGGAAGTCGTAATTCTGAAGCAGACAAGTCCAAGAACAGTTTTAGTTTAGAAAGTCA CATGGCTAGATCTTCCACCCAAAGAACATCATTTGCAAGATCAATTAGCCAAGCTTCTTCAAGCAGTAGAGACTCTCTTT CACTTAGCTTTCCTCTTCCTTATCAAATTTCTGTACATGATTCTGTAGAAGGGGCTAACGGTGATCACAAAAGTAGCGAA CTTGATACTGTGAAGCGTCAAAAGGTTTCTATTAAACGCTTGGCCAAGTTGAACAAGCCTGAGGTTCCTATCTTACTACT TGGATCCATTGCTGCAGCAGCACATGGTGTTATACTCCCTATATTTGGCCTCTTGCTTTCATCAGCTATTAATACATTCT ATGAACCTCCAGAACAACTTAGAAAAGATTCTGAGTATTGGTCACTTCTATTTTTGGGTTTGGGTGTTGCTACTCTGGCG GCTATACCAATCCAGAACTACTTATTTGGGATTGCTGGTGGAAAGCTCATAGAAAGGATCCGGTCATTGACATTTAAGAA GGTGGTGCACCAAGAAATCAGTTGGTTTGATCATCCTTCAAATTCAAGTGGTGCAGTCAGTGCAAGGTTAGCTACTGATG CTTCAACAGTGAGAACTCTTGTTGGTGACACCTTGGCCCTCATTGTGCAAAACATAGCAACAGTCGCAGCAGGTATAATT ATAGCATTCTCTGCTAATTGGAGGCTCTCTTTGGTAATTCTGGCCTTGTCACCTTTGATCCTTATGCAAGGGTTCTGTCA GATGAGGTTTCTTAAAGGATTCAGTTCAGATGCCAAGGAGAAATATGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTG GTAGCATCAGAACTGTTGCATCATTTTGCGCAGAACCAAAGGTCATGGATCTGTACCAGAAGAAATGTTCAGAGCCAACA AAACAAGGTGTTAGGTCGGGGCTTATTAGTGGTGCAGGATTAGGTTTCTCATTTTTTGCTCTATACTGCACAAATGCTGT CTGTTTCTACGTAGGATCTTATCTAGTGCAAAACGGGAAGGCCACATTTGGAGAGGTTTTCAAGGTTTTGTGCAGGTTTT CTTTTCTTTGA
Protein sequence (LotjaGi6g1v0314200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIIGVICAMANGWSQPLMTLIFGKLINTFGTTDPSHIVDEVYKVVWLFVYLAIGTGIVSFLQVSCWMVTGERQAARIRGL YLKTILKQDIAFFDTETSSGEVIGRMSGDTILIQDAMGEKVGKFIQLASTFIGGFVIAFTKGWQLCLVLLACIPCIVIVG GIMSMMMAKMSSRGQAAYTEAGTVVEQTVGAIRTVASFTGEKKAIEKYHNKLRIAYKTTVHQGLASGLGMGVLLMIIFST YALSMWYGCKLIIEKGYNGGDVFNIIISINTGGMSLGQTTPCLNAFASGQAAAYKMFETIKRKPKIDAYDTNGVVLEDIK GDIELKDVYFRYPARPEVQIFAGFSFYIPSGTTAALVGQSGSGKSTIISLLERFYDPEAGEILIDGVNLKSFQVRWIREQ IGLVGQEPVLFTASIKENIAYGKDGATDEEITTAITLANAKNFIDKLPQGIDTMLGGHGTQISGGQKQRIAIARAILKNP RILLLDEATSALDAESERVVQEALEKVMTKRTTVVVAHRLTTIRNADTIAVVHQGKIVEKGTHDELIKDPEGAYSQLIRL QEGAKKEEGSRNSEADKSKNSFSLESHMARSSTQRTSFARSISQASSSSRDSLSLSFPLPYQISVHDSVEGANGDHKSSE LDTVKRQKVSIKRLAKLNKPEVPILLLGSIAAAAHGVILPIFGLLLSSAINTFYEPPEQLRKDSEYWSLLFLGLGVATLA AIPIQNYLFGIAGGKLIERIRSLTFKKVVHQEISWFDHPSNSSGAVSARLATDASTVRTLVGDTLALIVQNIATVAAGII IAFSANWRLSLVILALSPLILMQGFCQMRFLKGFSSDAKEKYEEASQVANDAVGSIRTVASFCAEPKVMDLYQKKCSEPT KQGVRSGLISGAGLGFSFFALYCTNAVCFYVGSYLVQNGKATFGEVFKVLCRFSFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 931 | 931 | 0.0 | ||
| PANTHER | 1 | 931 | 931 | 0.0 | – | |
| Pfam | 1 | 272 | 272 | 4.9E-64 | ||
| Phobius | 1 | 43 | 43 | - | – | |
| SUPERFAMILY | 1 | 307 | 307 | 2.49E-58 | ||
| CDD | 1 | 296 | 296 | 5.18931E-118 | – | |
| Gene3D | 1 | 591 | 591 | 9.3E-236 | ||
| ProSiteProfiles | 2 | 288 | 287 | 48.318 | ||
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 44 | 68 | 25 | - | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| Phobius | 69 | 144 | 76 | - | – | |
| TMHMM | 121 | 140 | 20 | - | – | |
| TMHMM | 145 | 167 | 23 | - | – | |
| Phobius | 145 | 168 | 24 | - | – | |
| Phobius | 169 | 223 | 55 | - | – | |
| TMHMM | 223 | 245 | 23 | - | – | |
| Phobius | 224 | 247 | 24 | - | – | |
| Phobius | 248 | 661 | 414 | - | – | |
| SUPERFAMILY | 312 | 561 | 250 | 9.84E-87 | ||
| Gene3D | 316 | 565 | 250 | 9.3E-236 | – | |
| ProSiteProfiles | 323 | 559 | 237 | 24.79 | ||
| CDD | 323 | 561 | 239 | 5.94138E-141 | – | |
| Pfam | 344 | 490 | 147 | 4.1E-32 | ||
| SMART | 350 | 536 | 187 | 2.6E-15 | ||
| ProSitePatterns | 462 | 476 | 15 | - | ||
| MobiDBLite | 563 | 583 | 21 | - | – | |
| MobiDBLite | 563 | 603 | 41 | - | – | |
| MobiDBLite | 584 | 603 | 20 | - | – | |
| Gene3D | 635 | 936 | 302 | 1.8E-97 | ||
| SUPERFAMILY | 648 | 930 | 283 | 1.28E-55 | ||
| CDD | 655 | 930 | 276 | 1.92481E-116 | – | |
| Phobius | 662 | 686 | 25 | - | – | |
| TMHMM | 664 | 686 | 23 | - | – | |
| ProSiteProfiles | 666 | 936 | 271 | 43.922 | ||
| Pfam | 666 | 931 | 266 | 2.2E-64 | ||
| Phobius | 687 | 705 | 19 | - | – | |
| Phobius | 706 | 729 | 24 | - | – | |
| TMHMM | 707 | 729 | 23 | - | – | |
| Phobius | 730 | 784 | 55 | - | – | |
| TMHMM | 780 | 802 | 23 | - | – | |
| Phobius | 785 | 805 | 21 | - | – | |
| Phobius | 806 | 810 | 5 | - | – | |
| TMHMM | 809 | 831 | 23 | - | – | |
| Phobius | 811 | 831 | 21 | - | – | |
| Phobius | 832 | 936 | 105 | - | – | |
| TMHMM | 894 | 916 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0314200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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