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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0049200 |
| Transcript ID | LotjaGi1g1v0049200.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.2 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8; TrEMBL-Plants: tr|A0A0B2PRJ1|A0A0B2PRJ1_GLYSO Putative E3 ubiquitin-protein ligase HERC1; Found in the gene: LotjaGi1g1v0049200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6826247..6833987) extracted from Lotus japonicus Gifu genome v1.2.
TTTGTTTAACCATTAAAATTTTCTAAAGTTTATTTTGAGACTTGAGAGTACTAACTAATTAATCTATGATCATACTAAGT TTACCTACCCCATAGTCACATACTCACATACCATGTATTTGACCAAGTGACGTCCTACGTATGGAAGAGTTTTATGTACT TGGTAAATATGTTTTGAACTTCAGCAGGATCTCTTGTTACTTATCAACCAAGTGTTATATATGTGCTATGCTTGTCCTGT AATTCCTCAATCTTATAAGTCTTACCATGACTGAACTCCTTTATTGATCTTAAATGACAGGCAATTACTGCTTTAAAGAA AGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCTTTCGGCTATCCAATGTGAGTTTTTAAC TTCTCTTGGGTAGATTTAAGTTTATCCACGTTAAAGTGTGTCTCAATTTTGTTTTCCTGAAGATTTGTATTCGGCATTAA AAACTTTCAGAACCAAGCTTAGACTCAGTCTTTCTACTCTTTATTTTGTATGTTCTATAAATAATTGTGGAAGTATTTCT TCTAAATGCAGTAGGGGGAAGATAGAAGGGGTCCTTTAAGCTGAAAGACAGGGTGAACTATTTGTGGAAGAGAGGAGCTG AAATGAAAAATATTCAGCTGATAAGTTAAACAGTGAAAAACATGATATTCCAAAACTGTATGCTCTAAAATTAGAAATAC AATGCTACAGAAAAATCTATCAATCAATGGCTTAACAGCAATTAGGTTACCTTGAGATTAGGTTTCCAAAAGCGTTTGCA GTAACTTCATTATGAAAATTTGATAAGATCACAGTGATTATGGTATTGTGCCTAACTGCTAAATGAGTTTCCGGCAACAA TTTGAAGACTTGATTTTGTTTTTACCAAACCGGGTAGAGTGGGCAGCCTTGACTAGTCTAACTGATGAGACTGATTTGAT CTGCAAGAACCCTTCGTGCCAATATTTATAAACGGAAAGCTATCTTTCAACACAAGAAGCTAAATCTTATAATGGCAAGC ACTCAAATCCTCATAACTAGAATGTAAATTTGAATCTAAGCTTACATGTTACCTTATTAAGCCCCACATCGTGTCAAACA CTGCTGTATTTGGTGGTTATGCTTGCATTAATAGAATCTTCTGCATGACATTTCATGGCTTGAAAGCCATATGATTATTT TGCTACTGCCATAACATTGCTTATCGTTTATTTTATAAATTTTCCATAAATTATTTGTTTCTATTACATAAAGGATTGTT TTTAGATATTTTCCTGTTGCAAAGAATTTGAAGTATTTGATATTGCTATTTTTTCAGGATGAATCTGTTTTGATATGGTT CTCTGGGAAAGAAGAGAAGCACCTTAAACTGAGTCATGTCTCTAGAATTATATCTGGACAACGCACGGTAGATTTTTAAA TTGATTGTGAAATCATTATACTGTTAACCTTTTCAGATTTAGCCAACAGTGTGAGCCTTGTCAGCCTGGTTTCGATACGT AGTTGTTAAGTTCTATTTGATGTTTGTATGATTAACACAAATTGTGTTACTTCTCTGGTATGCAATCTTATGATCTCCAT TTGCTCGAAGTCAAGATATATGAATGATATCTTTTATTACCACCTACTAGTAAATAGTAATTGGCTTTATTTTTTACTTT ATGTTGTATTATGAATATTTACTTGCTTGTTTATGGCAGCTATTGGGTTTTTGTTTTGCTTTAAGGAACATGCTGATGAT TTTGTATTGTTTCAGTGTCCTATTCTAATAAGTTAATATTTATGTAAAAAGACCTTACTCATACATGAACTCAAGATTTT CTATTGAGCATGTGCATGAGTGTGTTTAATAATTTTAAATATATTGGTAGTTCCTTCTTGACTTTGGGCATCATCTGTTA ATACATATCAAGTGATAAGGTGAGTATGATTAATAAAACATGGTCCCTATTCTTTTCAGCCTATCTTTCAAAGATATCCG CGGCCTGAGAAGGAATACCAGTCGTTTTCTCTTATCTACAGTGATAGGTCACTGGACTTGGTATGGATTTCTTCATTTCT CTCTATTTTGGGATTTTTGGCTGTAGTTGGCCTATTGGTTTGCTTGTACTATGTTCTTGGTATTGTGAACAGTGTATTTT GTCTGTAAAAGCTTTACACAATCTAGTGATCTGATTCTCTTCTACTAGATATGCAAGGATAAAGATGAAGCTGAGGTTTG GTTCAGTGGTTTGAAAGCATTAATTTCACGAAGCCATCATAGAAAATGGAGAACAGACTCAAGAAGTGACGGTATTCCAT CTGAGGCTAATAGTCCTCGAACATACACAAGAAGAAGTTCTCCCTTAAATTCTCCATTTGGAAGTAATGAGAGCTTGCAA AAGGTAATACATATTATCCATGTCTTTCATATTTTCTTCCAATTTACTCCATTGCGGTTGAATATGTTTATTTAGAGAAT TTTCGTTTGTCCTTTTCAGGATAGTGGGGATCACCTTCGCCTCCATAGCCCATATGAGAGCCCCCCTAAAAATGGTTTGG ACAAAGCATTAGATGTGGTCTTGTATGCTGTTCCTCAAAAGGGTTTCTTCCCTCCTGATTCAGCCAGTGCTTCAGTCCAC TCTATATCATCCGGAGGATCAGATAGTATGCATGGTCACATGAGGACGGTGGGTATGGATGCTTTCAGGGTTAGTCTGTC AAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCTTTAGGGGATGTTTTCATTTGGGGGGAAG GCACAGGTGATGGTGTTCTGGGTGGTGGGAATCATCGAGTTGGGAGTTCTTTGGGTGTAAAAATTGATTCTCTATTTCCT AAAGCCTTGGAATCTGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGCGGACGACATGCGGCCTTAGTGACCAAACA AGGTGAAATTTTCTCCTGGGGTGAGGAATCAGGAGGCAGGCTTGGGCATGGTGTTGACTCTGATGTTCTCCAACCAAAGC TTATAGAAGCTCTAAGTAATACAAATATTGAACTTGTGGCTTGTGGGGAGTACCATACTTGTGCTGTGACCCTTTCTGGT GATCTTTATACATGGGGTAATGGCACATACAATTATGGTCTTCTGGGACATGGAAATCAAGTCAGCCACTGGGTCCCAAA AAGAGTAAATGGCCCCTTGGAAGGCATACATGTTTCATATATTTCATGTGGACCATGGCACACTGCTGTTGTAACATCTT CTGGGCAATTATTTACTTTTGGTGATGGTACATTTGGTGCTTTGGGTCATGGTGACCGAAAAAGTGTTTCAATACCAAGG GAAGTAGAGTCCCTCAAGGGTCTTCGTACTATGCGGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCAT GGTTGGAAGTTCGAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGGGATGGAGACAAAGGTCGACTTGGGC ATGGTGATAAGGAAGCAAAACTTGTTCCAACCTGTGTTGCTCTCGTTGAACACAACTTTTGTCGAGTTGCTTGTGGACAT AGTCTGACTGTTGTACTTACCACCTCAGGCCATGTCTATACCATGGGAAGTCCTGTCTATGGTCAGTTAGGAAATCCACA AGCTGATGGGAAGCTACCAACCCGCGTTGAAGGGAAATTGTCAAAGAGTTTTGTGGAGGAGATAGCTTGTGGTGCTTATC ATGTTGCGGTTTTAACTTTAAGGAACGAAGTCTACACTTGGGGTAAAGGTGCAAATGGCCGTTTAGGCCATGGAGATACA GATGATAGAAATGCCCCAACATTAGTGGAAGCTCTTAAAGAAAAACATGTCAAAAGTATCGCCTGCGGAACTAATATCAC TGCAGCTATCTGTCTGCATAAGTGGGTTTCTGGTGTTGACCAGTCTATGTGTTCTGGTTGTCGTATGCCGTTTAATTTCA AAAGGAAACGCCACAATTGTTATAACTGTGGCCTTGTTTTTTGTCATTCATGTAGCAGTAAGAAGTCTCATAAGGCTTCA ATGGCGCCAAACCCCAATAAACCTTATCGTGTCTGTGATAGTTGTTTTAATAAACTTAGGAAAACTGTAGAAACTGATTC TTCATCTCACTCTTCTATTAGCAGAAGAGGAAGTATAAATCAAGGGTCTGAAATGGTTGATAAGGATGATAAATTTGATT CCAGATCTCGTAATCAACTTGCCAGGTTTTCTTCAATGGAATCATTCAAACAAGTGGAAAGCAGATCTTCAAAGAAAAAC AAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGGGGTTCACAATGGGGAGCACTGAATATTTCTAA ATCTTTAAATCCTGTTTTTGGATCATCAAAGAAATTTTTCTCGGCTTCTGTTCCTGGATCTAGAATTGTTTCCCGGGCAA CATCTCCAATATCTAGACGGCCTAGTCCGCCACGTTCAACTACTCCAACCCCAACACTGGGAGGTCTTACATCCCCGAAA ATAGTTGTGGATGATGCTAAGAGGACTAATGATAGCCTCAGTCAGGAGGTTATTAAATTAAGACAGCAGGTATCTTTTTT ATGCATTCACTTACAATATTCCCTTTCTTGTTATAAAGTTCAAATAGAATTTTAACAAAAAAGGACTTATAGTTTGCACC CGATTTTATTCAACCAATTCTTTTCTTATGACATTAGTTTCTATGAATTTGTCTGATGAAATGGCATAGACAACATGTGG AAACAAAAGCAAGGATCTTGGATGTTGTTAGCAAGATGCCTCCTCATTGAGCTGACTTGTTTACTTTCTGCATTGTCTGA AAATACCTAATAGATGAATCACAATTTAAATTCCAACTACCACTTAAATGCACTTGCTAGAAATGTAGTATCTCCATGTA ATTAAATATATATACTACAATGCAAAATGTTTAGCAACATCATTGTTGAATGTCACAGTTCTATGATTTAACCTTTTATT TAATAATTACAAAGAAAAAAAATTAACAGTGGGTTGATTTTGATTCTTACAGAGCACTTCTTTTTTTAAGGGTTTCAAAT AATCAATTATAGAGCTTATTCTCATCACCCATCAACAATTTTTTTTTCTCATAAATAGTTGACTGTTCGATATAGTGGAT GCCTGATATCATTAATTTACTTTCATAGGTGGGAAATAATTTGTAGACATGCAACAAGGATGTTTAACTCACATGGTTGT CTATTTGTTGTGAGCGTTAAACATTGAAATTGTTTCCCCCCTTTTAGGTGGAAAGCCTGACTCGGAAAGCCCAACTTCAA GAAGTCGAGTTGGAAAGAACAACTAAACAGCTAAAAGATGCAATAGCAATTGCCGGGGAAGAAACTGCCAAATGTAAAGC AGCAAAGGAAGTAATCAAGTCTCTGACTGCCCAGGTAGAAACTTTAATCCCTTGGAACACTTTAACAAATTAGACTACTA TATATTTGACACAAATCAGCTGTCATGTCCTATAATAACTTATCTTAGAAAAAACAATATGCATTGAAGATGCACTGAGC TAACACTCATCTACCCTAAATATAAATTGTAAAGTCATAAGATGTTAAAGTCAGACCCAATATCAATTTTAAGCCAAACC AAAGTAACGAAATTTTTAATGGCTTAATACATCAGAAGGCCCCTGAAATTGTAAAGGAAATCAGTTTCAGGGCCTGAAAA ATTTTCGCATCAAATTGGGTCCTTAAGAAATTTTTTTTAATTCAATTAAGGCCAAATCTCAATTTTGTCCTAGTCATCAA TTACACGTGACTTTTATAATTTTTTTAAATTAAAAAAAACTAAAAATTATTTTTAAAAAAAAATTAAATTTGGCCTTAAA AAAAATTAAAAATATTTGCCCTAAAAGAAAATTTAAAAATTTGGCTTTTAATTCAATTAAAATTTTATTTGGCCTTAAAA AAAATAATTTTTTTTAATGAGTTGGAATTAAAAATAATTTTTATTTTATTTTTAATTAAAAAAAATTATAAAAGCCACGT GGAATTGATGACTGGGATAAAATTGAAGGCTGGCACACTTTGGCCTTAATTGAATTAAAAAAAATATTTCTAGGGACCCA ATTTGATGCAAAAAAATTTCAGGCCCTGGATTTGATTCCCTTTACAATTACAGGGGTCTTCTGATGTATTAAGCCTATTT AAGCTCTTATCTTCTAACAATTTTTTGTGTGTCGATTTTTCATGTATCATAACTAACTAATCCAACATTTTTTTTGTTTC TTCCGCTTAATAGTTGAAGGACATGGCTGAGCGGCTACCTGTAGGAGCAATTAGAAATGTCAAATCACCTTCTCTAGCTT CTTTTGGTTCCAATCCTTCTTCCAATGAAATTGGCTATGCTTCCATTGATCGATTAAATATTCAAGCAACAAGCCCAGAA GCAGACTTAGCTGGATCAAATAACCAGTCACTTTCAAATGGATCAAGCACGGTCAGTAATCGCAATGCAGGTCACACTAA ACAGAGCCAGTCAGATTCTAATAATAGAAATGGGAGCAGAACAAAGGATAGTGAATCTCGTAATGAGAGTGAATGGGTTG AGCAAGATGAACCTGGTGTATATATTACCCTCACCTCCCTACCAGGAGGTGTAAAAGATCTTAAGAGAGTTCGATTCAGG TATGGAATGCTCTTTAGACATTGATTTTCTGTCAGCACACAGAACTTCTGTGAAATTTGGTCATGTAGAATATGATATGC TTTTATTGAAAAAGGAAAAAGTAGAACTTGGGATTCATGGTGTTAGGACTATGACAATAACTATTCCTAGGTCAAATGAC AAACTAATGGCAATTTAGTCTCTTTTAGGGCCTGAAATATTTTGATGCAGTTGAGTGCTTTACTTCAATGGATGAGTGAG TTATAGTGTTCTACTTGCTTGTGTACCTTTTAGCTGTCGAGCAACTTTGCTTTCCGTTGTGTTTGAGGAGCCAGAATTAT GATTGCTTCCCAGCTTGGCAAAAGTTTATTTTTGCCATGCTAACATGATTTTGATCCTTCACTGGCTCAGCAATTACTAA CGGGAGTAACATTGAGAATAGAAATGGATTGTGTTCTATTATTGCCAAGAACATTCCTGACTGGTCTATTTGTCATGTTT CATGTCTTGATCAGCTGCAGATTTACTTTATCTTGAAACTATATAGTAATCTCCCACCATAATGTTTCATTCTATAATTT GGTATCTGCTGGGACAAATTAGAAAACTACATAGTATTCTATGATCGGACAAAATTTGACGCAGCTTCATACATGTTTTT ACTAATGTCCAATTATAACATGACACATGGGTTAGAAAATGGGAAGTTGAGGGACGTTATCACATTAATAAAATATGAAG AAAGTAGATGATTGAACTTTTAATTAGGAAACAACATGAACAATATATATATATATATAGTGCAGTATATATAGATAGAT AGATAGATAGATAGTACAATATCTAAGTTTTGTCCTTTATGATTATCCATTTTTTAATGAGTTTTGACTATAATGTTGGT GAATGCAGTCGAAAGCGGTTCAGTGAGAAACAAGCAGAGCAATGGTGGGCTGAGAACCGGGCAAGAGTATATGAACAGTA CAATGTACGAATGATTGACAAGTCCAGTGTTGGTGTTGGGAGTGATGACCTGGCTCATTGA
CDS sequence (LotjaGi1g1v0049200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGGTCACATGAGGACGGTGGGTATGGATGCTTTCAGGGTTAGTCTGTCAAGTGCTGTTAGCTCATCTAGCCAAGG TTCTGGTCATGATGATGGTGATGCTTTAGGGGATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTCTGGGTGGTG GGAATCATCGAGTTGGGAGTTCTTTGGGTGTAAAAATTGATTCTCTATTTCCTAAAGCCTTGGAATCTGCAGTAGTTCTT GATGTACAGAATATTGCTTGTGGCGGACGACATGCGGCCTTAGTGACCAAACAAGGTGAAATTTTCTCCTGGGGTGAGGA ATCAGGAGGCAGGCTTGGGCATGGTGTTGACTCTGATGTTCTCCAACCAAAGCTTATAGAAGCTCTAAGTAATACAAATA TTGAACTTGTGGCTTGTGGGGAGTACCATACTTGTGCTGTGACCCTTTCTGGTGATCTTTATACATGGGGTAATGGCACA TACAATTATGGTCTTCTGGGACATGGAAATCAAGTCAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCTTGGAAGGCAT ACATGTTTCATATATTTCATGTGGACCATGGCACACTGCTGTTGTAACATCTTCTGGGCAATTATTTACTTTTGGTGATG GTACATTTGGTGCTTTGGGTCATGGTGACCGAAAAAGTGTTTCAATACCAAGGGAAGTAGAGTCCCTCAAGGGTCTTCGT ACTATGCGGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCATGGTTGGAAGTTCGAGTTCCAGCAACTG CTCTTCAGGGAAGCTGTTTACTTGGGGGGATGGAGACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTC CAACCTGTGTTGCTCTCGTTGAACACAACTTTTGTCGAGTTGCTTGTGGACATAGTCTGACTGTTGTACTTACCACCTCA GGCCATGTCTATACCATGGGAAGTCCTGTCTATGGTCAGTTAGGAAATCCACAAGCTGATGGGAAGCTACCAACCCGCGT TGAAGGGAAATTGTCAAAGAGTTTTGTGGAGGAGATAGCTTGTGGTGCTTATCATGTTGCGGTTTTAACTTTAAGGAACG AAGTCTACACTTGGGGTAAAGGTGCAAATGGCCGTTTAGGCCATGGAGATACAGATGATAGAAATGCCCCAACATTAGTG GAAGCTCTTAAAGAAAAACATGTCAAAAGTATCGCCTGCGGAACTAATATCACTGCAGCTATCTGTCTGCATAAGTGGGT TTCTGGTGTTGACCAGTCTATGTGTTCTGGTTGTCGTATGCCGTTTAATTTCAAAAGGAAACGCCACAATTGTTATAACT GTGGCCTTGTTTTTTGTCATTCATGTAGCAGTAAGAAGTCTCATAAGGCTTCAATGGCGCCAAACCCCAATAAACCTTAT CGTGTCTGTGATAGTTGTTTTAATAAACTTAGGAAAACTGTAGAAACTGATTCTTCATCTCACTCTTCTATTAGCAGAAG AGGAAGTATAAATCAAGGGTCTGAAATGGTTGATAAGGATGATAAATTTGATTCCAGATCTCGTAATCAACTTGCCAGGT TTTCTTCAATGGAATCATTCAAACAAGTGGAAAGCAGATCTTCAAAGAAAAACAAGAAATTGGAATTCAACAGTAGCCGT GTCTCGCCTGTTCCAAATGGGGGTTCACAATGGGGAGCACTGAATATTTCTAAATCTTTAAATCCTGTTTTTGGATCATC AAAGAAATTTTTCTCGGCTTCTGTTCCTGGATCTAGAATTGTTTCCCGGGCAACATCTCCAATATCTAGACGGCCTAGTC CGCCACGTTCAACTACTCCAACCCCAACACTGGGAGGTCTTACATCCCCGAAAATAGTTGTGGATGATGCTAAGAGGACT AATGATAGCCTCAGTCAGGAGGTTATTAAATTAAGACAGCAGGTGGAAAGCCTGACTCGGAAAGCCCAACTTCAAGAAGT CGAGTTGGAAAGAACAACTAAACAGCTAAAAGATGCAATAGCAATTGCCGGGGAAGAAACTGCCAAATGTAAAGCAGCAA AGGAAGTAATCAAGTCTCTGACTGCCCAGTTGAAGGACATGGCTGAGCGGCTACCTGTAGGAGCAATTAGAAATGTCAAA TCACCTTCTCTAGCTTCTTTTGGTTCCAATCCTTCTTCCAATGAAATTGGCTATGCTTCCATTGATCGATTAAATATTCA AGCAACAAGCCCAGAAGCAGACTTAGCTGGATCAAATAACCAGTCACTTTCAAATGGATCAAGCACGGTCAGTAATCGCA ATGCAGGTCACACTAAACAGAGCCAGTCAGATTCTAATAATAGAAATGGGAGCAGAACAAAGGATAGTGAATCTCGTAAT GAGAGTGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACCCTCACCTCCCTACCAGGAGGTGTAAAAGATCTTAA GAGAGTTCGATTCAGTCGAAAGCGGTTCAGTGAGAAACAAGCAGAGCAATGGTGGGCTGAGAACCGGGCAAGAGTATATG AACAGTACAATGTACGAATGATTGACAAGTCCAGTGTTGGTGTTGGGAGTGATGACCTGGCTCATTGA
Protein sequence (LotjaGi1g1v0049200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHGHMRTVGMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSSLGVKIDSLFPKALESAVVL DVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLQPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGT YNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSIPREVESLKGLR TMRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNFCRVACGHSLTVVLTTS GHVYTMGSPVYGQLGNPQADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNAPTLV EALKEKHVKSIACGTNITAAICLHKWVSGVDQSMCSGCRMPFNFKRKRHNCYNCGLVFCHSCSSKKSHKASMAPNPNKPY RVCDSCFNKLRKTVETDSSSHSSISRRGSINQGSEMVDKDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSR VSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRT NDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLKDMAERLPVGAIRNVK SPSLASFGSNPSSNEIGYASIDRLNIQATSPEADLAGSNNQSLSNGSSTVSNRNAGHTKQSQSDSNNRNGSRTKDSESRN ESEWVEQDEPGVYITLTSLPGGVKDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVRMIDKSSVGVGSDDLAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 862 | 862 | 0.0 | – | |
| PANTHER | 1 | 862 | 862 | 0.0 | – | |
| Gene3D | 33 | 256 | 224 | 4.3E-57 | ||
| SUPERFAMILY | 36 | 426 | 391 | 3.66E-97 | ||
| ProSiteProfiles | 37 | 98 | 62 | 12.052 | ||
| PRINTS | 82 | 95 | 14 | 1.5E-17 | ||
| ProSitePatterns | 85 | 95 | 11 | - | ||
| Pfam | 99 | 147 | 49 | 3.3E-11 | ||
| ProSiteProfiles | 99 | 150 | 52 | 15.228 | ||
| PRINTS | 101 | 117 | 17 | 1.5E-17 | ||
| Pfam | 150 | 202 | 53 | 9.9E-11 | ||
| ProSiteProfiles | 151 | 205 | 55 | 14.122 | ||
| PRINTS | 151 | 167 | 17 | 1.5E-17 | ||
| ProSitePatterns | 192 | 202 | 11 | - | ||
| PRINTS | 192 | 208 | 17 | 1.5E-17 | ||
| Pfam | 205 | 254 | 50 | 6.6E-12 | ||
| ProSiteProfiles | 206 | 257 | 52 | 12.635 | ||
| PRINTS | 208 | 222 | 15 | 1.5E-17 | ||
| Gene3D | 257 | 435 | 179 | 3.7E-45 | ||
| Pfam | 269 | 317 | 49 | 1.7E-12 | ||
| ProSiteProfiles | 270 | 320 | 51 | 15.107 | ||
| PRINTS | 310 | 328 | 19 | 1.5E-17 | ||
| Pfam | 320 | 369 | 50 | 6.6E-8 | ||
| ProSiteProfiles | 321 | 372 | 52 | 13.097 | ||
| PRINTS | 368 | 389 | 22 | 1.5E-17 | ||
| ProSiteProfiles | 373 | 424 | 52 | 14.705 | ||
| Pfam | 374 | 421 | 48 | 6.3E-14 | ||
| SMART | 423 | 492 | 70 | 9.1E-19 | ||
| SUPERFAMILY | 425 | 496 | 72 | 2.59E-17 | ||
| Pfam | 425 | 491 | 67 | 2.3E-13 | ||
| ProSiteProfiles | 429 | 491 | 63 | 11.764 | ||
| CDD | 434 | 487 | 54 | 3.53257E-17 | – | |
| Gene3D | 436 | 492 | 57 | 4.4E-15 | ||
| MobiDBLite | 497 | 572 | 76 | - | – | |
| MobiDBLite | 497 | 512 | 16 | - | – | |
| MobiDBLite | 513 | 528 | 16 | - | – | |
| MobiDBLite | 557 | 572 | 16 | - | – | |
| MobiDBLite | 602 | 630 | 29 | - | – | |
| Coils | 634 | 675 | 42 | - | – | |
| Pfam | 685 | 718 | 34 | 1.3E-17 | ||
| Coils | 690 | 710 | 21 | - | – | |
| Pfam | 726 | 795 | 70 | 1.0E-22 | – | |
| MobiDBLite | 753 | 789 | 37 | - | – | |
| MobiDBLite | 753 | 806 | 54 | - | – | |
| MobiDBLite | 790 | 806 | 17 | - | – | |
| Pfam | 801 | 856 | 56 | 1.8E-29 | ||
| ProSiteProfiles | 802 | 857 | 56 | 35.54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0049200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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