Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0049200 |
Transcript ID | LotjaGi1g1v0049200.4 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|G7K368|G7K368_MEDTR Regulator of chromosome condensation (RCC1) family protein; Found in the gene: LotjaGi1g1v0049200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6826247..6833926) extracted from Lotus japonicus Gifu genome v1.2.
ATCTATGATCATACTAAGTTTACCTACCCCATAGTCACATACTCACATACCATGTATTTGACCAAGTGACGTCCTACGTA TGGAAGAGTTTTATGTACTTGGTAAATATGTTTTGAACTTCAGCAGGATCTCTTGTTACTTATCAACCAAGTGTTATATA TGTGCTATGCTTGTCCTGTAATTCCTCAATCTTATAAGTCTTACCATGACTGAACTCCTTTATTGATCTTAAATGACAGG CAATTACTGCTTTAAAGAAAGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCTTTCGGCTA TCCAATGTGAGTTTTTAACTTCTCTTGGGTAGATTTAAGTTTATCCACGTTAAAGTGTGTCTCAATTTTGTTTTCCTGAA GATTTGTATTCGGCATTAAAAACTTTCAGAACCAAGCTTAGACTCAGTCTTTCTACTCTTTATTTTGTATGTTCTATAAA TAATTGTGGAAGTATTTCTTCTAAATGCAGTAGGGGGAAGATAGAAGGGGTCCTTTAAGCTGAAAGACAGGGTGAACTAT TTGTGGAAGAGAGGAGCTGAAATGAAAAATATTCAGCTGATAAGTTAAACAGTGAAAAACATGATATTCCAAAACTGTAT GCTCTAAAATTAGAAATACAATGCTACAGAAAAATCTATCAATCAATGGCTTAACAGCAATTAGGTTACCTTGAGATTAG GTTTCCAAAAGCGTTTGCAGTAACTTCATTATGAAAATTTGATAAGATCACAGTGATTATGGTATTGTGCCTAACTGCTA AATGAGTTTCCGGCAACAATTTGAAGACTTGATTTTGTTTTTACCAAACCGGGTAGAGTGGGCAGCCTTGACTAGTCTAA CTGATGAGACTGATTTGATCTGCAAGAACCCTTCGTGCCAATATTTATAAACGGAAAGCTATCTTTCAACACAAGAAGCT AAATCTTATAATGGCAAGCACTCAAATCCTCATAACTAGAATGTAAATTTGAATCTAAGCTTACATGTTACCTTATTAAG CCCCACATCGTGTCAAACACTGCTGTATTTGGTGGTTATGCTTGCATTAATAGAATCTTCTGCATGACATTTCATGGCTT GAAAGCCATATGATTATTTTGCTACTGCCATAACATTGCTTATCGTTTATTTTATAAATTTTCCATAAATTATTTGTTTC TATTACATAAAGGATTGTTTTTAGATATTTTCCTGTTGCAAAGAATTTGAAGTATTTGATATTGCTATTTTTTCAGGATG AATCTGTTTTGATATGGTTCTCTGGGAAAGAAGAGAAGCACCTTAAACTGAGTCATGTCTCTAGAATTATATCTGGACAA CGCACGGTAGATTTTTAAATTGATTGTGAAATCATTATACTGTTAACCTTTTCAGATTTAGCCAACAGTGTGAGCCTTGT CAGCCTGGTTTCGATACGTAGTTGTTAAGTTCTATTTGATGTTTGTATGATTAACACAAATTGTGTTACTTCTCTGGTAT GCAATCTTATGATCTCCATTTGCTCGAAGTCAAGATATATGAATGATATCTTTTATTACCACCTACTAGTAAATAGTAAT TGGCTTTATTTTTTACTTTATGTTGTATTATGAATATTTACTTGCTTGTTTATGGCAGCTATTGGGTTTTTGTTTTGCTT TAAGGAACATGCTGATGATTTTGTATTGTTTCAGTGTCCTATTCTAATAAGTTAATATTTATGTAAAAAGACCTTACTCA TACATGAACTCAAGATTTTCTATTGAGCATGTGCATGAGTGTGTTTAATAATTTTAAATATATTGGTAGTTCCTTCTTGA CTTTGGGCATCATCTGTTAATACATATCAAGTGATAAGGTGAGTATGATTAATAAAACATGGTCCCTATTCTTTTCAGCC TATCTTTCAAAGATATCCGCGGCCTGAGAAGGAATACCAGTCGTTTTCTCTTATCTACAGTGATAGGTCACTGGACTTGG TATGGATTTCTTCATTTCTCTCTATTTTGGGATTTTTGGCTGTAGTTGGCCTATTGGTTTGCTTGTACTATGTTCTTGGT ATTGTGAACAGTGTATTTTGTCTGTAAAAGCTTTACACAATCTAGTGATCTGATTCTCTTCTACTAGATATGCAAGGATA AAGATGAAGCTGAGGTTTGGTTCAGTGGTTTGAAAGCATTAATTTCACGAAGCCATCATAGAAAATGGAGAACAGACTCA AGAAGTGACGGTATTCCATCTGAGGCTAATAGTCCTCGAACATACACAAGAAGAAGTTCTCCCTTAAATTCTCCATTTGG AAGTAATGAGAGCTTGCAAAAGGTAATACATATTATCCATGTCTTTCATATTTTCTTCCAATTTACTCCATTGCGGTTGA ATATGTTTATTTAGAGAATTTTCGTTTGTCCTTTTCAGGATAGTGGGGATCACCTTCGCCTCCATAGCCCATATGAGAGC CCCCCTAAAAATGGTTTGGACAAAGCATTAGATGTGGTCTTGTATGCTGTTCCTCAAAAGGGTTTCTTCCCTCCTGATTC AGCCAGTGCTTCAGTCCACTCTATATCATCCGGAGGATCAGATAGTATGCATGGTCACATGAGGACGGTGGGTATGGATG CTTTCAGGGTTAGTCTGTCAAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCTTTAGGGGAT GTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTCTGGGTGGTGGGAATCATCGAGTTGGGAGTTCTTTGGGTGTAAA AATTGATTCTCTATTTCCTAAAGCCTTGGAATCTGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGCGGACGACATG CGGCCTTAGTGACCAAACAAGGTGAAATTTTCTCCTGGGGTGAGGAATCAGGAGGCAGGCTTGGGCATGGTGTTGACTCT GATGTTCTCCAACCAAAGCTTATAGAAGCTCTAAGTAATACAAATATTGAACTTGTGGCTTGTGGGGAGTACCATACTTG TGCTGTGACCCTTTCTGGTGATCTTTATACATGGGGTAATGGCACATACAATTATGGTCTTCTGGGACATGGAAATCAAG TCAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCTTGGAAGGCATACATGTTTCATATATTTCATGTGGACCATGGCAC ACTGCTGTTGTAACATCTTCTGGGCAATTATTTACTTTTGGTGATGGTACATTTGGTGCTTTGGGTCATGGTGACCGAAA AAGTGTTTCAATACCAAGGGAAGTAGAGTCCCTCAAGGGTCTTCGTACTATGCGGGCTGCTTGTGGTGTTTGGCATACTG CTGCAGTTGTGGAAGTCATGGTTGGAAGTTCGAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGGGATGGA GACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTCCAACCTGTGTTGCTCTCGTTGAACACAACTTTTG TCGAGTTGCTTGTGGACATAGTCTGACTGTTGTACTTACCACCTCAGGCCATGTCTATACCATGGGAAGTCCTGTCTATG GTCAGTTAGGAAATCCACAAGCTGATGGGAAGCTACCAACCCGCGTTGAAGGGAAATTGTCAAAGAGTTTTGTGGAGGAG ATAGCTTGTGGTGCTTATCATGTTGCGGTTTTAACTTTAAGGAACGAAGTCTACACTTGGGGTAAAGGTGCAAATGGCCG TTTAGGCCATGGAGATACAGATGATAGAAATGCCCCAACATTAGTGGAAGCTCTTAAAGAAAAACATGTCAAAAGTATCG CCTGCGGAACTAATATCACTGCAGCTATCTGTCTGCATAAGTGGGTTTCTGGTGTTGACCAGTCTATGTGTTCTGGTTGT CGTATGCCGTTTAATTTCAAAAGGAAACGCCACAATTGTTATAACTGTGGCCTTGTTTTTTGTCATTCATGTAGCAGTAA GAAGTCTCATAAGGCTTCAATGGCGCCAAACCCCAATAAACCTTATCGTGTCTGTGATAGTTGTTTTAATAAACTTAGGA AAACTGTAGAAACTGATTCTTCATCTCACTCTTCTATTAGCAGAAGAGGAAGTATAAATCAAGGGTCTGAAATGGTTGAT AAGGATGATAAATTTGATTCCAGATCTCGTAATCAACTTGCCAGGTTTTCTTCAATGGAATCATTCAAACAAGTGGAAAG CAGATCTTCAAAGAAAAACAAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGGGGTTCACAATGGG GAGCACTGAATATTTCTAAATCTTTAAATCCTGTTTTTGGATCATCAAAGAAATTTTTCTCGGCTTCTGTTCCTGGATCT AGAATTGTTTCCCGGGCAACATCTCCAATATCTAGACGGCCTAGTCCGCCACGTTCAACTACTCCAACCCCAACACTGGG AGGTCTTACATCCCCGAAAATAGTTGTGGATGATGCTAAGAGGACTAATGATAGCCTCAGTCAGGAGGTTATTAAATTAA GACAGCAGGTATCTTTTTTATGCATTCACTTACAATATTCCCTTTCTTGTTATAAAGTTCAAATAGAATTTTAACAAAAA AGGACTTATAGTTTGCACCCGATTTTATTCAACCAATTCTTTTCTTATGACATTAGTTTCTATGAATTTGTCTGATGAAA TGGCATAGACAACATGTGGAAACAAAAGCAAGGATCTTGGATGTTGTTAGCAAGATGCCTCCTCATTGAGCTGACTTGTT TACTTTCTGCATTGTCTGAAAATACCTAATAGATGAATCACAATTTAAATTCCAACTACCACTTAAATGCACTTGCTAGA AATGTAGTATCTCCATGTAATTAAATATATATACTACAATGCAAAATGTTTAGCAACATCATTGTTGAATGTCACAGTTC TATGATTTAACCTTTTATTTAATAATTACAAAGAAAAAAAATTAACAGTGGGTTGATTTTGATTCTTACAGAGCACTTCT TTTTTTAAGGGTTTCAAATAATCAATTATAGAGCTTATTCTCATCACCCATCAACAATTTTTTTTTCTCATAAATAGTTG ACTGTTCGATATAGTGGATGCCTGATATCATTAATTTACTTTCATAGGTGGGAAATAATTTGTAGACATGCAACAAGGAT GTTTAACTCACATGGTTGTCTATTTGTTGTGAGCGTTAAACATTGAAATTGTTTCCCCCCTTTTAGGTGGAAAGCCTGAC TCGGAAAGCCCAACTTCAAGAAGTCGAGTTGGAAAGAACAACTAAACAGCTAAAAGATGCAATAGCAATTGCCGGGGAAG AAACTGCCAAATGTAAAGCAGCAAAGGAAGTAATCAAGTCTCTGACTGCCCAGGTAGAAACTTTAATCCCTTGGAACACT TTAACAAATTAGACTACTATATATTTGACACAAATCAGCTGTCATGTCCTATAATAACTTATCTTAGAAAAAACAATATG CATTGAAGATGCACTGAGCTAACACTCATCTACCCTAAATATAAATTGTAAAGTCATAAGATGTTAAAGTCAGACCCAAT ATCAATTTTAAGCCAAACCAAAGTAACGAAATTTTTAATGGCTTAATACATCAGAAGGCCCCTGAAATTGTAAAGGAAAT CAGTTTCAGGGCCTGAAAAATTTTCGCATCAAATTGGGTCCTTAAGAAATTTTTTTTAATTCAATTAAGGCCAAATCTCA ATTTTGTCCTAGTCATCAATTACACGTGACTTTTATAATTTTTTTAAATTAAAAAAAACTAAAAATTATTTTTAAAAAAA AATTAAATTTGGCCTTAAAAAAAATTAAAAATATTTGCCCTAAAAGAAAATTTAAAAATTTGGCTTTTAATTCAATTAAA ATTTTATTTGGCCTTAAAAAAAATAATTTTTTTTAATGAGTTGGAATTAAAAATAATTTTTATTTTATTTTTAATTAAAA AAAATTATAAAAGCCACGTGGAATTGATGACTGGGATAAAATTGAAGGCTGGCACACTTTGGCCTTAATTGAATTAAAAA AAATATTTCTAGGGACCCAATTTGATGCAAAAAAATTTCAGGCCCTGGATTTGATTCCCTTTACAATTACAGGGGTCTTC TGATGTATTAAGCCTATTTAAGCTCTTATCTTCTAACAATTTTTTGTGTGTCGATTTTTCATGTATCATAACTAACTAAT CCAACATTTTTTTTGTTTCTTCCGCTTAATAGTTGAAGGACATGGCTGAGCGGCTACCTGTAGGAGCAATTAGAAATGTC AAATCACCTTCTCTAGCTTCTTTTGGTTCCAATCCTTCTTCCAATGAAATTGGCTATGCTTCCATTGATCGATTAAATAT TCAAGCAACAAGCCCAGAAGCAGACTTAGCTGGATCAAATAACCAGTCACTTTCAAATGGATCAAGCACGGTCAGTAATC GCAATGCAGGTCACACTAAACAGAGCCAGTCAGATTCTAATAATAGAAATGGGAGCAGAACAAAGGATAGTGAATCTCGT AATGAGAGTGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACCCTCACCTCCCTACCAGGAGGTGTAAAAGATCT TAAGAGAGTTCGATTCAGGTATGGAATGCTCTTTAGACATTGATTTTCTGTCAGCACACAGAACTTCTGTGAAATTTGGT CATGTAGAATATGATATGCTTTTATTGAAAAAGGAAAAAGTAGAACTTGGGATTCATGGTGTTAGGACTATGACAATAAC TATTCCTAGGTCAAATGACAAACTAATGGCAATTTAGTCTCTTTTAGGGCCTGAAATATTTTGATGCAGTTGAGTGCTTT ACTTCAATGGATGAGTGAGTTATAGTGTTCTACTTGCTTGTGTACCTTTTAGCTGTCGAGCAACTTTGCTTTCCGTTGTG TTTGAGGAGCCAGAATTATGATTGCTTCCCAGCTTGGCAAAAGTTTATTTTTGCCATGCTAACATGATTTTGATCCTTCA CTGGCTCAGCAATTACTAACGGGAGTAACATTGAGAATAGAAATGGATTGTGTTCTATTATTGCCAAGAACATTCCTGAC TGGTCTATTTGTCATGTTTCATGTCTTGATCAGCTGCAGATTTACTTTATCTTGAAACTATATAGTAATCTCCCACCATA ATGTTTCATTCTATAATTTGGTATCTGCTGGGACAAATTAGAAAACTACATAGTATTCTATGATCGGACAAAATTTGACG CAGCTTCATACATGTTTTTACTAATGTCCAATTATAACATGACACATGGGTTAGAAAATGGGAAGTTGAGGGACGTTATC ACATTAATAAAATATGAAGAAAGTAGATGATTGAACTTTTAATTAGGAAACAACATGAACAATATATATATATATATAGT GCAGTATATATAGATAGATAGATAGATAGATAGTACAATATCTAAGTTTTGTCCTTTATGATTATCCATTTTTTAATGAG TTTTGACTATAATGTTGGTGAATGCAGTCGAAAGCGGTTCAGTGAGAAACAAGCAGAGCAATGGTGGGCTGAGAACCGGG CAAGAGTATATGAACAGTACAATGTACGAATGATTGACAAGTCCAGTGTTGGTGTTGGGAGTGATGACCTGGCTCATTGA
CDS sequence (LotjaGi1g1v0049200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCTATGCTTGTCCTGCAATTACTGCTTTAAAGAAAGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAA GTTTTGCCCCTTTCGGCTATCCAATGATGAATCTGTTTTGATATGGTTCTCTGGGAAAGAAGAGAAGCACCTTAAACTGA GTCATGTCTCTAGAATTATATCTGGACAACGCACGCCTATCTTTCAAAGATATCCGCGGCCTGAGAAGGAATACCAGTCG TTTTCTCTTATCTACAGTGATAGGTCACTGGACTTGATATGCAAGGATAAAGATGAAGCTGAGGTTTGGTTCAGTGGTTT GAAAGCATTAATTTCACGAAGCCATCATAGAAAATGGAGAACAGACTCAAGAAGTGACGGTATTCCATCTGAGGCTAATA GTCCTCGAACATACACAAGAAGAAGTTCTCCCTTAAATTCTCCATTTGGAAGTAATGAGAGCTTGCAAAAGGATAGTGGG GATCACCTTCGCCTCCATAGCCCATATGAGAGCCCCCCTAAAAATGGTTTGGACAAAGCATTAGATGTGGTCTTGTATGC TGTTCCTCAAAAGGGTTTCTTCCCTCCTGATTCAGCCAGTGCTTCAGTCCACTCTATATCATCCGGAGGATCAGATAGTA TGCATGGTCACATGAGGACGGTGGGTATGGATGCTTTCAGGGTTAGTCTGTCAAGTGCTGTTAGCTCATCTAGCCAAGGT TCTGGTCATGATGATGGTGATGCTTTAGGGGATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTCTGGGTGGTGG GAATCATCGAGTTGGGAGTTCTTTGGGTGTAAAAATTGATTCTCTATTTCCTAAAGCCTTGGAATCTGCAGTAGTTCTTG ATGTACAGAATATTGCTTGTGGCGGACGACATGCGGCCTTAGTGACCAAACAAGGTGAAATTTTCTCCTGGGGTGAGGAA TCAGGAGGCAGGCTTGGGCATGGTGTTGACTCTGATGTTCTCCAACCAAAGCTTATAGAAGCTCTAAGTAATACAAATAT TGAACTTGTGGCTTGTGGGGAGTACCATACTTGTGCTGTGACCCTTTCTGGTGATCTTTATACATGGGGTAATGGCACAT ACAATTATGGTCTTCTGGGACATGGAAATCAAGTCAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCTTGGAAGGCATA CATGTTTCATATATTTCATGTGGACCATGGCACACTGCTGTTGTAACATCTTCTGGGCAATTATTTACTTTTGGTGATGG TACATTTGGTGCTTTGGGTCATGGTGACCGAAAAAGTGTTTCAATACCAAGGGAAGTAGAGTCCCTCAAGGGTCTTCGTA CTATGCGGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCATGGTTGGAAGTTCGAGTTCCAGCAACTGC TCTTCAGGGAAGCTGTTTACTTGGGGGGATGGAGACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTCC AACCTGTGTTGCTCTCGTTGAACACAACTTTTGTCGAGTTGCTTGTGGACATAGTCTGACTGTTGTACTTACCACCTCAG GCCATGTCTATACCATGGGAAGTCCTGTCTATGGTCAGTTAGGAAATCCACAAGCTGATGGGAAGCTACCAACCCGCGTT GAAGGGAAATTGTCAAAGAGTTTTGTGGAGGAGATAGCTTGTGGTGCTTATCATGTTGCGGTTTTAACTTTAAGGAACGA AGTCTACACTTGGGGTAAAGGTGCAAATGGCCGTTTAGGCCATGGAGATACAGATGATAGAAATGCCCCAACATTAGTGG AAGCTCTTAAAGAAAAACATGTCAAAAGTATCGCCTGCGGAACTAATATCACTGCAGCTATCTGTCTGCATAAGTGGGTT TCTGGTGTTGACCAGTCTATGTGTTCTGGTTGTCGTATGCCGTTTAATTTCAAAAGGAAACGCCACAATTGTTATAACTG TGGCCTTGTTTTTTGTCATTCATGTAGCAGTAAGAAGTCTCATAAGGCTTCAATGGCGCCAAACCCCAATAAACCTTATC GTGTCTGTGATAGTTGTTTTAATAAACTTAGGAAAACTGTAGAAACTGATTCTTCATCTCACTCTTCTATTAGCAGAAGA GGAAGTATAAATCAAGGGTCTGAAATGGTTGATAAGGATGATAAATTTGATTCCAGATCTCGTAATCAACTTGCCAGGTT TTCTTCAATGGAATCATTCAAACAAGTGGAAAGCAGATCTTCAAAGAAAAACAAGAAATTGGAATTCAACAGTAGCCGTG TCTCGCCTGTTCCAAATGGGGGTTCACAATGGGGAGCACTGAATATTTCTAAATCTTTAAATCCTGTTTTTGGATCATCA AAGAAATTTTTCTCGGCTTCTGTTCCTGGATCTAGAATTGTTTCCCGGGCAACATCTCCAATATCTAGACGGCCTAGTCC GCCACGTTCAACTACTCCAACCCCAACACTGGGAGGTCTTACATCCCCGAAAATAGTTGTGGATGATGCTAAGAGGACTA ATGATAGCCTCAGTCAGGAGGTTATTAAATTAAGACAGCAGGTGGAAAGCCTGACTCGGAAAGCCCAACTTCAAGAAGTC GAGTTGGAAAGAACAACTAAACAGCTAAAAGATGCAATAGCAATTGCCGGGGAAGAAACTGCCAAATGTAAAGCAGCAAA GGAAGTAATCAAGTCTCTGACTGCCCAGTTGAAGGACATGGCTGAGCGGCTACCTGTAGGAGCAATTAGAAATGTCAAAT CACCTTCTCTAGCTTCTTTTGGTTCCAATCCTTCTTCCAATGAAATTGGCTATGCTTCCATTGATCGATTAAATATTCAA GCAACAAGCCCAGAAGCAGACTTAGCTGGATCAAATAACCAGTCACTTTCAAATGGATCAAGCACGGTCAGTAATCGCAA TGCAGGTCACACTAAACAGAGCCAGTCAGATTCTAATAATAGAAATGGGAGCAGAACAAAGGATAGTGAATCTCGTAATG AGAGTGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACCCTCACCTCCCTACCAGGAGGTGTAAAAGATCTTAAG AGAGTTCGATTCAGTCGAAAGCGGTTCAGTGAGAAACAAGCAGAGCAATGGTGGGCTGAGAACCGGGCAAGAGTATATGA ACAGTACAATGTACGAATGATTGACAAGTCCAGTGTTGGTGTTGGGAGTGATGACCTGGCTCATTGA
Protein sequence (LotjaGi1g1v0049200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCYACPAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQS FSLIYSDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTDSRSDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSG DHLRLHSPYESPPKNGLDKALDVVLYAVPQKGFFPPDSASASVHSISSGGSDSMHGHMRTVGMDAFRVSLSSAVSSSSQG SGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSSLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEE SGGRLGHGVDSDVLQPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGI HVSYISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSIPREVESLKGLRTMRAACGVWHTAAVVEVMVGSSSSSNC SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNFCRVACGHSLTVVLTTSGHVYTMGSPVYGQLGNPQADGKLPTRV EGKLSKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNAPTLVEALKEKHVKSIACGTNITAAICLHKWV SGVDQSMCSGCRMPFNFKRKRHNCYNCGLVFCHSCSSKKSHKASMAPNPNKPYRVCDSCFNKLRKTVETDSSSHSSISRR GSINQGSEMVDKDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSS KKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEV ELERTTKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLKDMAERLPVGAIRNVKSPSLASFGSNPSSNEIGYASIDRLNIQ ATSPEADLAGSNNQSLSNGSSTVSNRNAGHTKQSQSDSNNRNGSRTKDSESRNESEWVEQDEPGVYITLTSLPGGVKDLK RVRFSRKRFSEKQAEQWWAENRARVYEQYNVRMIDKSSVGVGSDDLAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SUPERFAMILY | 4 | 111 | 108 | 1.16E-27 | – | |
Gene3D | 5 | 121 | 117 | 2.5E-21 | ||
PANTHER | 6 | 1075 | 1070 | 0.0 | – | |
PANTHER | 6 | 1075 | 1070 | 0.0 | – | |
CDD | 7 | 112 | 106 | 5.45802E-50 | – | |
Pfam | 9 | 111 | 103 | 1.7E-6 | ||
MobiDBLite | 120 | 174 | 55 | - | – | |
MobiDBLite | 126 | 156 | 31 | - | – | |
Gene3D | 246 | 469 | 224 | 4.8E-57 | ||
SUPERFAMILY | 249 | 639 | 391 | 7.94E-97 | ||
ProSiteProfiles | 250 | 311 | 62 | 12.052 | ||
PRINTS | 295 | 308 | 14 | 6.3E-17 | ||
ProSitePatterns | 298 | 308 | 11 | - | ||
ProSiteProfiles | 312 | 363 | 52 | 15.228 | ||
Pfam | 312 | 360 | 49 | 4.3E-11 | ||
PRINTS | 314 | 330 | 17 | 6.3E-17 | ||
Pfam | 363 | 415 | 53 | 1.3E-10 | ||
PRINTS | 364 | 380 | 17 | 6.3E-17 | ||
ProSiteProfiles | 364 | 418 | 55 | 14.122 | ||
PRINTS | 405 | 421 | 17 | 6.3E-17 | ||
ProSitePatterns | 405 | 415 | 11 | - | ||
Pfam | 418 | 467 | 50 | 8.6E-12 | ||
ProSiteProfiles | 419 | 470 | 52 | 12.635 | ||
PRINTS | 421 | 435 | 15 | 6.3E-17 | ||
Gene3D | 470 | 648 | 179 | 4.9E-45 | ||
Pfam | 482 | 530 | 49 | 2.2E-12 | ||
ProSiteProfiles | 483 | 533 | 51 | 15.107 | ||
PRINTS | 523 | 541 | 19 | 6.3E-17 | ||
Pfam | 533 | 582 | 50 | 8.6E-8 | ||
ProSiteProfiles | 534 | 585 | 52 | 13.097 | ||
PRINTS | 581 | 602 | 22 | 6.3E-17 | ||
ProSiteProfiles | 586 | 637 | 52 | 14.705 | ||
Pfam | 587 | 634 | 48 | 8.2E-14 | ||
SMART | 636 | 705 | 70 | 9.1E-19 | ||
Pfam | 638 | 704 | 67 | 3.0E-13 | ||
SUPERFAMILY | 638 | 709 | 72 | 3.45E-17 | ||
ProSiteProfiles | 642 | 704 | 63 | 11.764 | ||
CDD | 647 | 700 | 54 | 5.94678E-17 | – | |
Gene3D | 649 | 705 | 57 | 5.7E-15 | ||
MobiDBLite | 710 | 785 | 76 | - | – | |
MobiDBLite | 710 | 725 | 16 | - | – | |
MobiDBLite | 726 | 741 | 16 | - | – | |
MobiDBLite | 770 | 785 | 16 | - | – | |
MobiDBLite | 815 | 843 | 29 | - | – | |
Coils | 847 | 888 | 42 | - | – | |
Pfam | 898 | 931 | 34 | 1.6E-17 | ||
Coils | 903 | 923 | 21 | - | – | |
Pfam | 939 | 1008 | 70 | 1.4E-22 | – | |
MobiDBLite | 966 | 1002 | 37 | - | – | |
MobiDBLite | 966 | 1019 | 54 | - | – | |
MobiDBLite | 1003 | 1019 | 17 | - | – | |
Pfam | 1014 | 1069 | 56 | 2.4E-29 | ||
ProSiteProfiles | 1015 | 1070 | 56 | 35.54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0049200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…