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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0134600 |
Transcript ID | LotjaGi2g1v0134600.2 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1JDG4|I1JDG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:48801389..48810020) extracted from Lotus japonicus Gifu genome v1.2.
TCTTTTATTTTTGTGGTTTACAATGTTGCTTTTTTCATTATGCAGGCACTAATTGCCTTGAAAAAGGGTGCTCAACTGCT TAAATATGGTCGTAAGGGAAAGCCCAAGTTTTGCCCATTTAGACTTTCCAATGTAAGTTAATTGAAAGGTCTATCTGAAA TATGTTTGTGGATTCTCCATTTCGTTTCCTTTTAATCTGCTTGGTCAGACAATGATTAACTGAATATATTAAATACTCAA TTATTAATCTATGGGAAACACTTGCTTTTGCATGTTTACTTTGTTATATTATTTGAGGGATACTGCGCAAAATACTTTTA GTTTGTTTTTCTTATATTTTATATTCCCTACATGTTATGAGGTATTGTGTTGCTCTTGATTGGGATTAAATTCTGACATA CTGGGTGTGCTCTGTGTTTTCGTTTCACCAGTAGGGAGTTACTATTAATTTTTTATCACTGGCTAACTGATAGAACTTGC TCAGAATACAAACGCAAAATTGTTTTATAGACAGGAAATTCTCCATGCTCCATAGTTGATTTGCTGTGCTAACAGTTACT CAGCCATTGAACAAGAACAAAAGGAAATAAGATAGCAGTGAGGTTTTTGAGAAACCTAGAACCCCCCCTCCTTAATTTCA TTTTCAATTCTCATGCCAAACCCTGTAATCACTCCATCCTGTTAATAATATCCTATCATCTCTAAATCCTTAACTAACTA TTCCAACTCTAACCAAACAGTTACGTTAGCTAACACTAACTCTCATGTGGGGACTGTAATTTATAGCCTGTTCCTAAATT TTTTTACGTCTATTTTCTGTATCCCTTTACTGCCAGAGATTTAGATGACTATGTGTTGATGCATTTAATTTTACTTCCAT GCCGTATTTAAATTTCACTTTATGTGTAAGATCTGTTCTTTCATGAGTTGGCATGGGGATGTCAGTTGGCTCATGCAATT TAATGGCAGATTGCAGGTCATATTTTTCATTGCACTCAATATTTGTGTGGTTCTGAACTGATTTTAGGTTCTTCTTTTTT AAACTCTTTGGATTGGGATTGAAATAATTTATTTGGTTTGTTCACCATGCAGCTCAGAAATAGGGAGTTGATTTTCGCAC CCCATGCACCTAATTTAGTGTTAATTTCCCAAAATGCCCTCCGCTTCATTGTTTACCGGTATCTAAAACCCGGTACACCT TTTTGTGATTAACGTACCGGGAATTAAAACCTCGTATATTAAAAATAAAAAATTTAAATTTGCTTCGGGGTTCTTTTCTT ATTCCCGGTACAGCTTTTGGTGATTTACAGCATGGGAACCTAAGTTCCCGGAATTTAATTAGAATTGTACCGGATTTTAA AATCCTGCTAGTACACACTAACAATACCGGGTTCTAAAACACAGTATGTTAAAAATGCATTACTGGATTTTCGAAAACCC TGTAATGTGTTTTTAAATATCGGGTTTTAGCTCCTGGACTTAAAACATATATATACCGGAAATTTGAAAATCTGGTAGAT GAGTTTTTAAGATACGGTTTTTTGAAAATCCGAGAGATGAGGGGGTGAGTACGTGGAAGAGGAAGGGATTTATGGAATTT TAAAATGAAGGTGGGTGAGAGAATTGGGTTGTTGGGGGTGTTAATAACAACACCCTTAGAAATATATAGTTATGCAGTTT TAAGATTAGTTTGAAATCTTTTATTATATTTTTGCTGCCAAAAAATTAGAAAATAGCATTTGATTTCAAAGGTAGGGCAC CTGGTAGCTTGTTTTTGCATGCCACATTTTAGGTTCATTATAATCACTAGAGGTATAATAATAATAATTAATTCTTAAAT AAAAAAAAATCAAATATTTTTGTTAGACTCGGGTCAGATACACGGACTAGTTACTGGAGTTGCCTAATCCCCTAATTTGA GTAATGGTGCTACTGCTACCTTTTCTTGGTATTGCAGCTTTATAGCTGGACTAGCATTTCATGTTTGTTTTATGCTTATG GCGTATTCTATGCTTCTGTGGTGGTAGGCGATGTTCTTAAACATTTTGTCCAGTATACTGGAATTTTTAGACTTAATTGA ATTATTTCTATGTGCACATTTAAATATACAAAAATGCAGGATGGATCAACTTTAATCTGGATTTCAAGTAGTGGAGAAAG AAATCTGAAGCTATCTTCTGTCTCAAGAATTATTCCTGGACAAAGAACTGTGAGATTTGTGGACTTCAATTTAATATTAT ACTTTGCCATGGATTCTGTGATTAACCAAAACCAAGTGATCTCATCAAAATTCTCCCCATAAGCTTACTTTTATCTGTTC TGTATTTTCTTTCCTGTATCTTTTCGCAGGCTGTTTTCAAACGTTACTTGCGTCCTGAAAAGGAGTATTTGTCCTTTTCA CTTATTTATGATAGCGGAAAGCGATCCCTTGACCTGGTTAGTGACAATATATGTGATTCCATGGATAACTGCATAATTAT TTTGTTTTCATTTTCTGTGTCTTCCATTATTCTAAATAATTTCTGTGTTGCTTTTTAGATTTGCAAAGATAAAGTTGAGG CAGAAGCGTGGATTTCTGGTCTCAAATCACTGATCTCTTCTGGCCAAGGTGGTCGGTCCAAAATTGATGGATGGAGTGAT GAGGGCCTCAATCTTGATGTAAAAACAGCAACTTATGGTCGTTTTATTTAAATTCATTTGTGTGTTATATTATAATAGAC TTAGACCACGTTTGGAAGAGCTTATTTTCCTTAGCATTTACATGACATATAGATTCTATTCCATGATTGGTGCATTTTAA AAATAGATCAAAATTTGACAGGAGTTTTAAAAGTAGTACACTTTGGCTCTACTAAAAATGGTGCAACCAACAGAGTCTAT TCCATTGCTTTTATCTGTTCCTTTCATTTTTATCTCTGTGCCCAACACTACCTTCGGGTGCATGTTTTTGACAAGTCAGG ATAGAGAGAACTTGTTAGTTATTTGATTCATTATATTAGTGATTATCGTTTACTGTAAGGAAAGCTAGTCTTTATTTCTC AGTTTATAGCCTTATTTTATTCATTATATGCTGCAGTTCCTCCGGTAGTCACTTACTTGTCCTCTTCTCTGGTCTTTTTT AGGTTTAAATTTAATTGTTTGGGTTGATTAGCAAACTCTAATTTTTTCTAGGATGTATCTTTTTGTGAATAAATTCAACT GACTTTATGCTAGTTTTTACATTTTTTTACTACTATTGCCATTATGCTTTGTGATATCTCCCTGATGAAATTCATGGTAA GTTGCTCATAATTATTTCTGGCACAATTAATTTCAGGATAGCAGAGATTTAACATCAAATAGTCCAAGCGACAGTTCAGC TAGTGCGTCACGAGACATTAGTTCTCCTGACGTTCCTGCGAGTCTTCCAAATACCTCACCAAAGTCCTTTTGGCCTGACA ATATTGTAAATTCTGAAAGGTCACATGCACCATCAGACTCAACAAATATGCAAGTAAAAGGATCTGGTCCAGATGCTTTT CGTGTCAGTGTTTCAAGTGCCCCCAGCACGTCTAGTCATGGATCTGCACCAGATGACTATGATGCTCTGGGGGATGTATA TATATGGGGGGATATTATCTGTGAAAACGTGCAAGTTAGTGCCGATAAAAGTGTCAGTTATTTCAGTCCAAGGGCAGATG CGCTTATCCCCAAACCCCTAGAGTCCAATGTAGTTTTAGATGTACATCATATAGCATGTGGAGTTAGACATGCTTCTTTA GTCACTAGGCAAGGTGAGGTTTTTACGTGGGGTGAAGAATCAGGAGGACGCCTTGGCCATGGTGTTGGGAAAAATGTGGT TCAACCTCGTCTAGTTGAAGCATTGACTTCTACAACTGTTGATTTTGTTGCCTGTGGGGAGTTCCATTCCTGTGCTGTTA CAGTGGCCGGTGAACTATATACATGGGGTGATGGTACTCATCATGCTGGGCTGCTTGGTCATGGAACTGATGTTAGTCAT TGGATACCAAAGAGAATTGCCGGTCCATTAGAGGGACTTCAAATTGCATCTGTTGCCTGTGGTCCGTGGCACACTGCCTT GATAACTTTAAGTGGGCAGCTCTTTACATTTGGTGATGGAACTTTTGGTGTCTTGGGTCATGGTGATAGGGGAAACATTT CATGTCCTAGAGAAGTGGAATCCTTATCAGGGCTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCACACTGCAGCCGTG GTAGAGGTTATTGCAACGCAAACTAGTGCGAGTTTATCATCAGGTAAATTGTTTACTTGGGGTGATGGAGACAAAAATCG CCTTGGGCATGGGGATAAGGAGGCACGACTTAAACCAACTTGTGTGCCTGCACTTATTGAGTACAATTTTCATAAAATTG CTTGTGGACACAGTTTGACAGTAGGCCTGACAATATCTGGACGTGTTTTTACCATGGGAAGTACTGTATATGGTCAGCTT GGGAATCCCAAGTCTGATGGAAAGCTGCCCTGCTTGGTTGGAGACAAGATTGCTGGGGAGTCCGCTGAAGAAATCGCATG TGGTGCATATCACGTGGCTGTTTTAACATCCAAAAATGAAGTTTACACTTGGGGTAAGGGTGCAAATGGGAGATTGGGTC ATGGAGATCTTGAAGATCGAAAAACACCAACTCTGGTTGAAGCATTGAAGGACCGACATGTGAAATATATTGCATGTGGT TCAAACTACTCGGCTGCCATATGCCTTCATAAGTGGGTATCTGGTGCTGAGCAGTCTCAATGCTCTGCCTGTAGACAGGC ATTTGGCTTCACTAGAAAGAGGCACAATTGTTACAACTGTGGACTTGTGCACTGCCATTCATGCAGTTCAAGGAAAGCAT TAAGAGCAGCACTAGCTCCTAATCCTGGCAAGCCATATCGTGTTTGTGAATCTTGTTATGTAAAATTGAACAAGGTTGCA GAAACTAACCATAATAATCGGAGGAGTGCTTTGCCACGTCTGTCGGGTGAAAACAAGGATAGGTTAGACAAGTCTGAGCT AAGATTGTCCAAGTCAGTAATTCCTTCTAACATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAAGGAAAGA AGGCTGATACATTCTCACTAGTTCGCTCCTCGCAAGGACCTTCCTTGCTACAGCTGAAAGATGTTGTATTCTCGACTGCT GTTGATCTGAAACGAACTGTTCCAAGACCGGTGGTTGCACCATCTGGAGTAAGTTCAAGGTCTGTGTCCCCTTTCTCTCA GAGACCAAGCCCTCCTCGTTCTGCTACACCTATTCCAACAACATCAGGGCTTTCCTTCTCCAAAAATATTGCTGATAGGT TAAAGAAAACAAATGAAATTTTAAATCAGGAAGTGCAGATGTTACGTGCTCAGGTGCGTTTTCCTTTCCTTCTCTCATGT GTATCAAGTAGCCAAAGTACCCTTCATTAACAATAAAACTATTGTCCATTTAAACTTTTGCTCTGCAATTTTGAGCCTGT AAATGAACCTTATGAAACATGAGCAGGATCTCTTTGCTCAATTTGCCAAAGAAGTTAAGGTCACATGTTCATTAAAATAT TTTTAACTTTTTTATGGTATCAAGAGAGGTCTAATTATTGATATCATTAGGTTGAGAGCCTGAGGAAGAGATCTGAACTA CAAGAGTTAGAGCTTCAAAGGTCAACAAAAAAGACACAAGAAGCTTTGGCACTGGCTTCTGAGGAATCTGCTAAATCTAA AGCTGCAAAAGAAGTTATAAAGTCACTTACGGCACAGGTATTTTTCTGGTTAATGTACTTCTGTTCTGTTGGAGCCAGAT GTCTTTGAAATTATTTATTTTCATGTAGTGTTTCATTATTTGTTGCTTCACTTTAACTTTTCCTCATTATCATTTGAATA AAATGGATATCAAGATTAACCCATGTATCAAATTGTAATTATATAATATTTTTTCACTGTCACAAGATTCTAAGAACTGA TTTTTTATGAACAGTTATCATTCATGATCTTGGTGCATGGTATTTAAGAATTTACTTTCATTTTCTGTTTTGTTTTAGCT TCAATAGTATATTAAAAATGTTAAATTAATCTGTATGTCCTTATAGTTTCACTCAATTTGTATTTAAATCCTTGTAATTT AAAATGTTTTAATCCTATCCTTATAAATTTTTTATTTAATCCTTACACATTAACACTATTAAATGTTCTCTCAAGTATTA GTGCTAATGTAGTATTGCTCACATGGAAATGTTTATTTTTTATTTTCATCTTTTTCCTTTTTTTAAGTACCATTAGTTTC TTAATCCCTAAATTCTGATTTTGTTTTGTGGATCCATATTGCATGTGAGCTTTTATTCTTCTTAGATTTAGATATTATTT TCACGTTTTAAGAAACATTTACATGTCTCATTTTTTATGTTATTTTGTCATGTTTAGTTGTCCACAAAAGCAAGTTTACC TATGTTAAGACTTTTAGACTAAGGAAATGTCTATCATTTCGCAAAGAGCGCTTTTCATTTTTTTTTCTTGCACTGATTTT TGTTTGACAAAATAGTTAGTTTTATTTTGACAATTTTGTTTCATTTTTTAAATTATAATAACAGGCATATAACATATTGT ATATTGTACCATATCAATCATATTTTATAATAACTTTAGTGGAAGGATTGTTGTCAGGATCGAATTGTAAATTTTTTAAC TTCTGAGGTTTTAATAAAAAATAATTAAACGCTAAGGATTTAATTAAAAATTGGATGAAACTAAAAGGACTAAGAGATTA AGTTAACCTATTAAAAACTACATATTTGTTGTGACATGCACACGGAGGTCCGAGTCTTGTAGTATATTGTTAAAGTCTTT ATTCAGATAGAGTTACCCCACATTTTCCTTTATCTTCCATATACTGATAAGCATGGCTGTTCCACACTCAAATTGATTGC CCATTAACATCTTTTCAGCTCAAAGATCTGGCTGAGAGGCTTCCTCCTGGAGTTTATGATGCTGAGAACATTAGACCACC TTACCAGCCAAATGGCATCCACTATCCAGACTCAAATGGGGAGCAGCACTCCAAGGCAGAATTAATCAGCAGCCCTAGTT CGGCTTCCATAGGACTTGGATCCTCGCTGTCGAATGGAAATTTGGGGAATTTTGCAGGAGCCAATGGAACCAATAGTCAC GAGCAAATCCGTACCCTCGTGACCTCTAATGGGACCAATAATTATCCAGGTGTGAAATTTCCAAATGGTGGTGCTGATTT TCAGGCAAGCAGCAATATCATATCAGGCACTGTTGATGGAAGGGATTCTGGGAATTTCCAAGATGATGAGAGTGGTCTGA AATCAAAGAATGCTGTGCTGGCTGCTAATAGTAATCATATTGAGGCAGAGTGGATTGAACAGTATGAACCTGGTGTCTAT ATAACCCTTGTGGCCCTGCGTGATGGAACTAGAGATCTGAAGCGAGTACGATTCAGGTAATAAAAATCTTCAGCATAATC AGGTTATCCATACCTGGTTCTACTTGAGTATTTGGCTTTGGGTGTCCAGCTGTAGCCTGTAGATGATTTCACTAATATTT GATCAGTGATAGGCCAATAGATTGGCCTGCAGTCGGCCTAGGCCAAGCTAGCTGGTCTTATTTACTAAATAAATTAATTC AAAACTTTTTAATAGTTCATTTAGCCAAAAAATCAGGTTTAGGTTATCCGAAAAACCTTTTAGATTTGACAGGACTGCCT ATTTAAGCATATATAAGTAATATAGTTATTTTTTATAATTGATATTATTATTATGCTAGATCTTAATTTTAATGTTTTAA AATCATATACTTGTTGTTATTATGTAAAGATTTAGGCCTCTTGGCCTACTGAATAGGCTTTCAAATAGATTTTCAGATTA TAAGCCAAAGTTTCAAAAAGGCCAGGTTAAATCCTTAAGAAAAGGTATATATCATGTAAACAGCCCAAACTTAAGGTTTG AGAAATCGGCCAAACCTAGGCTGTATATTGCAGAATTTAAAAATAGTTTGAACTTTGTTGGTCTTTGACTCAGATGTCTC CCCCCGTCCAGGACACTGTAATTGTCTCTCCCAATAAATCACTTTGCTAATAATGTGAACTTTAACTATAATCTTGGGCT TATGTTCGCACCCTTATGAAGGTCTAGCTTGCTTATCACTAGACCAACAACTTGTTGGTTAAGACAGTATGAAGTATGAA CTTTAACTATGCATTGCGGAATTTAAAAAAGTATGAACTTTAACTATAATCTTCTTACTCTTAGGTCATTGCTTTGCTAA TAATTCTATATCTTAGTGATATTCTGCATGAATATCTTTTACTAGGCCAATATATTGGTGATTGGAAGTTTGCAGCTCCC TTTATACTAAGATCTTTAGTATTTCATGCAGTCGTTAATTTTCACATCTCTCTTTAATGGTAAATGTAATCGCAGCCGGA GGAAATTCGGAGAGAACCAAGCAGAGATTTGGTGGTCAGAGAACCGGGAGAAGGTATATGAAAAATACAATGTTCGTAGT GGGGACAAGTCTTCCAGCCAAGCAGCACTTAGGGAAGAGGGCGCTGGTTCTCCTGTTTCCCGAAAAGCTTAG
CDS sequence (LotjaGi2g1v0134600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGCACTAATTGCCTTGAAAAAGGGTGCTCAACTGCTTAAATATGGTCGTAAGGGAAAGCCCAAGTTTTGCCCATT TAGACTTTCCAATGATGGATCAACTTTAATCTGGATTTCAAGTAGTGGAGAAAGAAATCTGAAGCTATCTTCTGTCTCAA GAATTATTCCTGGACAAAGAACTGCTGTTTTCAAACGTTACTTGCGTCCTGAAAAGGAGTATTTGTCCTTTTCACTTATT TATGATAGCGGAAAGCGATCCCTTGACCTGATTTGCAAAGATAAAGTTGAGGCAGAAGCGTGGATTTCTGGTCTCAAATC ACTGATCTCTTCTGGCCAAGGTGGTCGGTCCAAAATTGATGGATGGAGTGATGAGGGCCTCAATCTTGATGATAGCAGAG ATTTAACATCAAATAGTCCAAGCGACAGTTCAGCTAGTGCGTCACGAGACATTAGTTCTCCTGACGTTCCTGCGAGTCTT CCAAATACCTCACCAAAGTCCTTTTGGCCTGACAATATTGTAAATTCTGAAAGGTCACATGCACCATCAGACTCAACAAA TATGCAAGTAAAAGGATCTGGTCCAGATGCTTTTCGTGTCAGTGTTTCAAGTGCCCCCAGCACGTCTAGTCATGGATCTG CACCAGATGACTATGATGCTCTGGGGGATGTATATATATGGGGGGATATTATCTGTGAAAACGTGCAAGTTAGTGCCGAT AAAAGTGTCAGTTATTTCAGTCCAAGGGCAGATGCGCTTATCCCCAAACCCCTAGAGTCCAATGTAGTTTTAGATGTACA TCATATAGCATGTGGAGTTAGACATGCTTCTTTAGTCACTAGGCAAGGTGAGGTTTTTACGTGGGGTGAAGAATCAGGAG GACGCCTTGGCCATGGTGTTGGGAAAAATGTGGTTCAACCTCGTCTAGTTGAAGCATTGACTTCTACAACTGTTGATTTT GTTGCCTGTGGGGAGTTCCATTCCTGTGCTGTTACAGTGGCCGGTGAACTATATACATGGGGTGATGGTACTCATCATGC TGGGCTGCTTGGTCATGGAACTGATGTTAGTCATTGGATACCAAAGAGAATTGCCGGTCCATTAGAGGGACTTCAAATTG CATCTGTTGCCTGTGGTCCGTGGCACACTGCCTTGATAACTTTAAGTGGGCAGCTCTTTACATTTGGTGATGGAACTTTT GGTGTCTTGGGTCATGGTGATAGGGGAAACATTTCATGTCCTAGAGAAGTGGAATCCTTATCAGGGCTGAGGACAATAGC TGTTGCATGTGGAGTGTGGCACACTGCAGCCGTGGTAGAGGTTATTGCAACGCAAACTAGTGCGAGTTTATCATCAGGTA AATTGTTTACTTGGGGTGATGGAGACAAAAATCGCCTTGGGCATGGGGATAAGGAGGCACGACTTAAACCAACTTGTGTG CCTGCACTTATTGAGTACAATTTTCATAAAATTGCTTGTGGACACAGTTTGACAGTAGGCCTGACAATATCTGGACGTGT TTTTACCATGGGAAGTACTGTATATGGTCAGCTTGGGAATCCCAAGTCTGATGGAAAGCTGCCCTGCTTGGTTGGAGACA AGATTGCTGGGGAGTCCGCTGAAGAAATCGCATGTGGTGCATATCACGTGGCTGTTTTAACATCCAAAAATGAAGTTTAC ACTTGGGGTAAGGGTGCAAATGGGAGATTGGGTCATGGAGATCTTGAAGATCGAAAAACACCAACTCTGGTTGAAGCATT GAAGGACCGACATGTGAAATATATTGCATGTGGTTCAAACTACTCGGCTGCCATATGCCTTCATAAGTGGGTATCTGGTG CTGAGCAGTCTCAATGCTCTGCCTGTAGACAGGCATTTGGCTTCACTAGAAAGAGGCACAATTGTTACAACTGTGGACTT GTGCACTGCCATTCATGCAGTTCAAGGAAAGCATTAAGAGCAGCACTAGCTCCTAATCCTGGCAAGCCATATCGTGTTTG TGAATCTTGTTATGTAAAATTGAACAAGGTTGCAGAAACTAACCATAATAATCGGAGGAGTGCTTTGCCACGTCTGTCGG GTGAAAACAAGGATAGGTTAGACAAGTCTGAGCTAAGATTGTCCAAGTCAGTAATTCCTTCTAACATGGATTTGATAAAG CAGCTAGATAGTAAGGCAGCCAAACAAGGAAAGAAGGCTGATACATTCTCACTAGTTCGCTCCTCGCAAGGACCTTCCTT GCTACAGCTGAAAGATGTTGTATTCTCGACTGCTGTTGATCTGAAACGAACTGTTCCAAGACCGGTGGTTGCACCATCTG GAGTAAGTTCAAGGTCTGTGTCCCCTTTCTCTCAGAGACCAAGCCCTCCTCGTTCTGCTACACCTATTCCAACAACATCA GGGCTTTCCTTCTCCAAAAATATTGCTGATAGGTTAAAGAAAACAAATGAAATTTTAAATCAGGAAGTGCAGATGTTACG TGCTCAGGTTGAGAGCCTGAGGAAGAGATCTGAACTACAAGAGTTAGAGCTTCAAAGGTCAACAAAAAAGACACAAGAAG CTTTGGCACTGGCTTCTGAGGAATCTGCTAAATCTAAAGCTGCAAAAGAAGTTATAAAGTCACTTACGGCACAGCTCAAA GATCTGGCTGAGAGGCTTCCTCCTGGAGTTTATGATGCTGAGAACATTAGACCACCTTACCAGCCAAATGGCATCCACTA TCCAGACTCAAATGGGGAGCAGCACTCCAAGGCAGAATTAATCAGCAGCCCTAGTTCGGCTTCCATAGGACTTGGATCCT CGCTGTCGAATGGAAATTTGGGGAATTTTGCAGGAGCCAATGGAACCAATAGTCACGAGCAAATCCGTACCCTCGTGACC TCTAATGGGACCAATAATTATCCAGGTGTGAAATTTCCAAATGGTGGTGCTGATTTTCAGGCAAGCAGCAATATCATATC AGGCACTGTTGATGGAAGGGATTCTGGGAATTTCCAAGATGATGAGAGTGGTCTGAAATCAAAGAATGCTGTGCTGGCTG CTAATAGTAATCATATTGAGGCAGAGTGGATTGAACAGTATGAACCTGGTGTCTATATAACCCTTGTGGCCCTGCGTGAT GGAACTAGAGATCTGAAGCGAGTACGATTCAGCCGGAGGAAATTCGGAGAGAACCAAGCAGAGATTTGGTGGTCAGAGAA CCGGGAGAAGGTATATGAAAAATACAATGTTCGTAGTGGGGACAAGTCTTCCAGCCAAGCAGCACTTAGGGAAGAGGGCG CTGGTTCTCCTGTTTCCCGAAAAGCTTAG
Protein sequence (LotjaGi2g1v0134600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQALIALKKGAQLLKYGRKGKPKFCPFRLSNDGSTLIWISSSGERNLKLSSVSRIIPGQRTAVFKRYLRPEKEYLSFSLI YDSGKRSLDLICKDKVEAEAWISGLKSLISSGQGGRSKIDGWSDEGLNLDDSRDLTSNSPSDSSASASRDISSPDVPASL PNTSPKSFWPDNIVNSERSHAPSDSTNMQVKGSGPDAFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGDIICENVQVSAD KSVSYFSPRADALIPKPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTSTTVDF VACGEFHSCAVTVAGELYTWGDGTHHAGLLGHGTDVSHWIPKRIAGPLEGLQIASVACGPWHTALITLSGQLFTFGDGTF GVLGHGDRGNISCPREVESLSGLRTIAVACGVWHTAAVVEVIATQTSASLSSGKLFTWGDGDKNRLGHGDKEARLKPTCV PALIEYNFHKIACGHSLTVGLTISGRVFTMGSTVYGQLGNPKSDGKLPCLVGDKIAGESAEEIACGAYHVAVLTSKNEVY TWGKGANGRLGHGDLEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSACRQAFGFTRKRHNCYNCGL VHCHSCSSRKALRAALAPNPGKPYRVCESCYVKLNKVAETNHNNRRSALPRLSGENKDRLDKSELRLSKSVIPSNMDLIK QLDSKAAKQGKKADTFSLVRSSQGPSLLQLKDVVFSTAVDLKRTVPRPVVAPSGVSSRSVSPFSQRPSPPRSATPIPTTS GLSFSKNIADRLKKTNEILNQEVQMLRAQVESLRKRSELQELELQRSTKKTQEALALASEESAKSKAAKEVIKSLTAQLK DLAERLPPGVYDAENIRPPYQPNGIHYPDSNGEQHSKAELISSPSSASIGLGSSLSNGNLGNFAGANGTNSHEQIRTLVT SNGTNNYPGVKFPNGGADFQASSNIISGTVDGRDSGNFQDDESGLKSKNAVLAANSNHIEAEWIEQYEPGVYITLVALRD GTRDLKRVRFSRRKFGENQAEIWWSENREKVYEKYNVRSGDKSSSQAALREEGAGSPVSRKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 118 | 118 | 1.7E-21 | ||
SUPERFAMILY | 2 | 109 | 108 | 1.53E-25 | – | |
PANTHER | 2 | 1083 | 1082 | 0.0 | – | |
PANTHER | 2 | 1083 | 1082 | 0.0 | – | |
CDD | 2 | 110 | 109 | 1.76604E-47 | – | |
Pfam | 4 | 109 | 106 | 1.1E-6 | ||
MobiDBLite | 130 | 215 | 86 | - | – | |
MobiDBLite | 132 | 192 | 61 | - | – | |
Gene3D | 180 | 443 | 264 | 9.8E-54 | ||
MobiDBLite | 200 | 214 | 15 | - | – | |
SUPERFAMILY | 221 | 610 | 390 | 3.07E-96 | ||
ProSiteProfiles | 283 | 334 | 52 | 14.243 | ||
Pfam | 283 | 331 | 49 | 3.2E-9 | ||
PRINTS | 285 | 301 | 17 | 1.1E-13 | ||
PRINTS | 335 | 351 | 17 | 1.1E-13 | ||
Pfam | 335 | 386 | 52 | 1.5E-9 | ||
ProSiteProfiles | 335 | 389 | 55 | 14.484 | ||
ProSitePatterns | 376 | 386 | 11 | - | ||
PRINTS | 376 | 392 | 17 | 1.1E-13 | ||
Pfam | 389 | 438 | 50 | 4.9E-12 | ||
ProSiteProfiles | 390 | 441 | 52 | 12.896 | ||
PRINTS | 392 | 406 | 15 | 1.1E-13 | ||
ProSitePatterns | 428 | 438 | 11 | - | ||
Gene3D | 444 | 613 | 170 | 1.2E-45 | ||
Pfam | 452 | 499 | 48 | 2.7E-11 | ||
ProSiteProfiles | 453 | 504 | 52 | 13.72 | ||
PRINTS | 494 | 512 | 19 | 1.1E-13 | ||
Pfam | 504 | 553 | 50 | 6.3E-6 | ||
ProSiteProfiles | 505 | 556 | 52 | 12.373 | ||
PRINTS | 552 | 573 | 22 | 1.1E-13 | ||
ProSiteProfiles | 557 | 608 | 52 | 14.886 | ||
Pfam | 558 | 605 | 48 | 4.7E-14 | ||
SMART | 607 | 676 | 70 | 1.7E-19 | ||
Pfam | 609 | 675 | 67 | 6.7E-13 | ||
SUPERFAMILY | 609 | 681 | 73 | 1.77E-17 | ||
ProSiteProfiles | 613 | 675 | 63 | 11.548 | ||
Gene3D | 614 | 676 | 63 | 9.8E-16 | ||
CDD | 618 | 671 | 54 | 6.0799E-16 | – | |
MobiDBLite | 769 | 802 | 34 | - | – | |
Coils | 809 | 850 | 42 | - | – | |
Pfam | 860 | 895 | 36 | 6.4E-19 | ||
Coils | 865 | 885 | 21 | - | – | |
MobiDBLite | 890 | 921 | 32 | - | – | |
MobiDBLite | 907 | 921 | 15 | - | – | |
Pfam | 1020 | 1075 | 56 | 1.2E-28 | ||
ProSiteProfiles | 1021 | 1076 | 56 | 35.37 | ||
MobiDBLite | 1077 | 1102 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi2g1v0134600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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