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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013210
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 576 results. Now displaying 3 of 12 with 50 rows per page. This search has taken 5.582s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2910560.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like isoform X1 [Cicer arietinum] gi|502106329|ref|XP_004492917.1| chr1 32782596 32784388 -
2 domain predictions
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Lj1g3v2910580.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr1 32787150 32792227 -
2 domain predictions
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Lj1g3v2910590.1
n.a. n.a. chr1 32787406 32792227 +
2 domain predictions
 –
Lj1g3v2952270.1
n.a. PREDICTED: receptor-like protein kinase-like [Glycine max] gi|356529280|ref|XP_003533223.1| chr1 33453749 33456980 +
2 domain predictions
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Lj1g3v3103680.2
n.a. PREDICTED: protein NSP-INTERACTING KINASE 1-like [Glycine max] gi|356526591|ref|XP_003531900.1| chr1 35223426 35225517 -
2 domain predictions
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Lj1g3v3171130.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356499695|ref|XP_003518672.1| chr1 35938585 35942574 -
2 domain predictions
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Lj1g3v4289020.2
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940-like [Glycine max] gi|356572056|ref|XP_003554186.1| chr1 50519261 50522517 +
2 domain predictions
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Lj1g3v4315310.1
n.a. PREDICTED: polygalacturonase inhibitor-like [Glycine max] gi|356572074|ref|XP_003554195.1| chr1 50650237 50651594 -
2 domain predictions
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Lj1g3v4315330.1
n.a. PREDICTED: polygalacturonase inhibitor-like [Glycine max] gi|356572074|ref|XP_003554195.1| chr1 50657647 50659020 -
2 domain predictions
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Lj1g3v4316400.1
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 2-like [Cicer arietinum] gi|502109101|ref|XP_004493566.1| chr1 50713517 50719144 -
2 domain predictions
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Lj1g3v4404370.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356570538|ref|XP_003553442.1| chr1 51333999 51335668 -
2 domain predictions
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Lj1g3v4515870.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Solanum lycopersicum] gi|460404056|ref|XP_004247501.1| chr1 53126599 53130958 -
2 domain predictions
 –
Lj1g3v4528370.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Glycine max] gi|356570674|ref|XP_003553510.1| chr1 53294622 53298488 -
2 domain predictions
 –
Lj1g3v4693100.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Cicer arietinum] gi|502111675|ref|XP_004494131.1| chr1 55784172 55787477 -
2 domain predictions
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Lj1g3v4730400.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502112140|ref|XP_004494248.1| chr1 56652576 56656895 -
2 domain predictions
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Lj1g3v5020760.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357493485|ref|XP_003617031.1| chr1 61045989 61047517 -
2 domain predictions
 –
Lj1g3v5061080.1
n.a. PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Glycine max] gi|356504209|ref|XP_003520891.1| chr1 62029906 62032098 +
2 domain predictions
 –
Lj2g3v0561100.2
n.a. Nodulation receptor kinase [Medicago truncatula] gi|357499011|ref|XP_003619794.1| chr2 7443803 7447081 -
2 domain predictions
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Lj2g3v0561190.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356561798|ref|XP_003549165.1| chr2 7495060 7498988 +
2 domain predictions
 –
Lj2g3v0636320.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr2 10104093 10107525 -
2 domain predictions
 –
Lj2g3v0636420.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr2 10122703 10126263 -
2 domain predictions
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Lj2g3v0743220.1
n.a. leucine-rich repeat receptor-like protein [Lotus japonicus] gi|336088213|dbj|BAK39955.1| chr2 11781923 11784097 +
2 domain predictions
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Lj2g3v0852080.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356495853|ref|XP_003516786.1| chr2 13095422 13099091 -
2 domain predictions
 –
Lj2g3v0852090.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356497583|ref|XP_003517639.1| chr2 13100029 13103881 -
2 domain predictions
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Lj2g3v0854120.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Cicer arietinum] gi|502164103|ref|XP_004513049.1| chr2 13113584 13117710 -
2 domain predictions
 –
Lj2g3v0892280.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 6-like [Cicer arietinum] gi|502164171|ref|XP_004513070.1| chr2 13636707 13638527 -
2 domain predictions
 –
Lj2g3v0932650.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561446|ref|XP_003548992.1| chr2 14734798 14736419 -
2 domain predictions
 –
Lj2g3v1022570.1
n.a. PREDICTED: probable inactive receptor kinase At1g27190-like [Cicer arietinum] gi|502090841|ref|XP_004489358.1| chr2 16167823 16170408 +
2 domain predictions
 –
Lj2g3v1196640.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 1-like [Glycine max] gi|356498122|ref|XP_003517902.1| chr2 19044050 19047890 +
2 domain predictions
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Lj2g3v1241150.1
n.a. PREDICTED: receptor-like protein kinase 2-like [Glycine max] gi|356502639|ref|XP_003520125.1| chr2 19650481 19655160 -
2 domain predictions
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Lj2g3v1550030.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Cicer arietinum] gi|502162016|ref|XP_004512361.1| chr2 24504001 24515335 +
2 domain predictions
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Lj2g3v1550210.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24617165 24620297 +
2 domain predictions
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Lj2g3v1550220.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24623507 24631322 +
2 domain predictions
 –
Lj2g3v1550220.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24623507 24627465 +
2 domain predictions
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Lj2g3v1550260.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24647829 24651585 +
2 domain predictions
 –
Lj2g3v1550260.2
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24647829 24651585 +
2 domain predictions
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Lj2g3v1550290.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24661913 24665974 -
2 domain predictions
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Lj2g3v1550300.1
n.a. n.a. chr2 24661913 24665646 +
2 domain predictions
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Lj2g3v1550330.1
n.a. n.a. chr2 24672572 24677456 +
2 domain predictions
 –
Lj2g3v1550360.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24680573 24684084 -
2 domain predictions
 –
Lj2g3v1550370.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24680573 24684084 -
2 domain predictions
 –
Lj2g3v1707560.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502161315|ref|XP_004512119.1| chr2 26400868 26405408 -
2 domain predictions
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Lj2g3v1984140.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2-like [Glycine max] gi|356495521|ref|XP_003516625.1| chr2 28971468 28975119 -
2 domain predictions
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Lj2g3v1984370.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1-like [Cicer arietinum] gi|502160581|ref|XP_004511796.1| chr2 29015057 29019497 -
2 domain predictions
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Lj2g3v1984380.1
n.a. receptor-like protein kinase 3 precursor [Glycine max] gi|351726467|ref|NP_001235080.1| chr2 29015251 29019497 -
2 domain predictions
 –
Lj2g3v2002570.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357481915|ref|XP_003611243.1| chr2 30362464 30365880 +
2 domain predictions
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Lj2g3v2002860.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460-like [Cicer arietinum] gi|502160100|ref|XP_004511633.1| chr2 30521444 30524692 +
2 domain predictions
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Lj2g3v2017580.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] gi|356497232|ref|XP_003517466.1| chr2 30908167 30911940 +
2 domain predictions
 –
Lj2g3v2087830.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Cicer arietinum] gi|502139102|ref|XP_004503646.1| chr2 31369191 31372833 +
2 domain predictions
 –
Lj2g3v2173020.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356498894|ref|XP_003518282.1| chr2 32631709 32634679 -
2 domain predictions
 –