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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2002860 |
| Transcript ID | Lj2g3v2002860.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460-like [Cicer arietinum] gi|502160100|ref|XP_004511633.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| PANTHER | 5 | 879 | 875 | 0 | – | |
| PANTHER | 5 | 879 | 875 | 0 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 9 | 21 | 13 | – | – | |
| Phobius | 22 | 26 | 5 | – | – | |
| Phobius | 27 | 519 | 493 | – | – | |
| Gene3D | 30 | 274 | 245 | 7.20E-59 | ||
| Pfam | 30 | 70 | 41 | 3.10E-11 | ||
| SUPERFAMILY | 51 | 197 | 147 | 2.21E-20 | ||
| SMART | 96 | 119 | 24 | 170 | ||
| Pfam | 98 | 156 | 59 | 4.50E-07 | ||
| SMART | 144 | 168 | 25 | 250 | ||
| SUPERFAMILY | 162 | 499 | 338 | 4.88E-59 | ||
| Gene3D | 275 | 499 | 225 | 1.10E-60 | ||
| SMART | 337 | 360 | 24 | 120 | ||
| SMART | 409 | 433 | 25 | 15 | ||
| Pfam | 436 | 457 | 22 | 0.81 | ||
| SMART | 457 | 479 | 23 | 66 | ||
| Phobius | 520 | 544 | 25 | – | – | |
| TMHMM | 523 | 545 | 23 | – | – | |
| Gene3D | 541 | 674 | 134 | 1.50E-14 | – | |
| Phobius | 545 | 889 | 345 | – | – | |
| ProSiteProfiles | 601 | 889 | 289 | 33.686 | ||
| SUPERFAMILY | 602 | 880 | 279 | 9.56E-64 | ||
| Pfam | 603 | 877 | 275 | 1.60E-35 | ||
| CDD | 607 | 882 | 276 | 1.32E-86 | – | |
| Gene3D | 678 | 881 | 204 | 4.30E-36 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v2002860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2002860.1, powered by CORGI.
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