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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032675
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 2134 results. Now displaying 9 of 43 with 50 rows per page. This search has taken 5.854s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0415090.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Glycine max] gi|356518991|ref|XP_003528158.1| chr1 5130270 5133165 -
3 domain predictions
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Lj1g3v0448970.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357495065|ref|XP_003617821.1| chr1 5986294 5987053 -
2 domain predictions
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Lj1g3v0526480.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360-like [Glycine max] gi|356519088|ref|XP_003528206.1| chr1 6611600 6615007 +
3 domain predictions
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Lj1g3v0627680.2
n.a. n.a. chr1 8233677 8236316 -
3 domain predictions
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Lj1g3v0627680.3
n.a. n.a. chr1 8238212 8249374 -
3 domain predictions
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Lj1g3v0694020.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X2 [Cicer arietinum] gi|502177298|ref|XP_004516050.1| chr1 8962713 8977545 -
3 domain predictions
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Lj1g3v0809660.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 3-like isoform 1 [Glycine max] gi|356501661|ref|XP_003519642.1| chr1 10607004 10612204 +
3 domain predictions
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Lj1g3v0814990.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr1 10713223 10716157 -
2 domain predictions
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Lj1g3v0815000.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr1 10714677 10715876 -
2 domain predictions
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Lj1g3v0913150.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr1 11606378 11612816 -
3 domain predictions
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Lj1g3v0934380.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356507598|ref|XP_003522551.1| chr1 11730957 11733726 +
3 domain predictions
 –
Lj1g3v1060470.1
n.a. Kinase-like protein [Medicago truncatula] gi|357464125|ref|XP_003602344.1| chr1 13106600 13110033 +
3 domain predictions
 –
Lj1g3v1091410.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357460487|ref|XP_003600525.1| chr1 13778897 13793906 +
3 domain predictions
 –
Lj1g3v1113880.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502136730|ref|XP_004502808.1| chr1 13953318 13969716 +
3 domain predictions
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Lj1g3v1147540.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220498 +
3 domain predictions
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Lj1g3v1147550.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220810 +
3 domain predictions
 –
Lj1g3v1207870.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like isoform X1 [Cicer arietinum] gi|502136840|ref|XP_004502857.1| chr1 14753957 14759281 -
3 domain predictions
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Lj1g3v1222370.1
n.a. PREDICTED: brassinosteroid LRR receptor kinase-like [Cicer arietinum] gi|502136882|ref|XP_004502878.1| chr1 14923173 14927479 -
3 domain predictions
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Lj1g3v1222380.1
n.a. Brassinosteroid receptor [Medicago truncatula] gi|357464445|ref|XP_003602504.1| chr1 14923489 14927479 -
3 domain predictions
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Lj1g3v1290390.1
n.a. PREDICTED: protein TONSOKU-like [Glycine max] gi|356528540|ref|XP_003532859.1| chr1 15404600 15413979 -
2 domain predictions
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Lj1g3v1355750.1
n.a. n.a. chr1 16149756 16155322 -
2 domain predictions
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Lj1g3v1361010.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
3 domain predictions
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Lj1g3v1361010.2
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
3 domain predictions
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Lj1g3v1361010.3
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
3 domain predictions
 –
Lj1g3v1361010.4
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286719 16294297 -
3 domain predictions
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Lj1g3v1527370.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X2 [Cicer arietinum] gi|502142316|ref|XP_004504897.1| chr1 18316347 18317054 -
2 domain predictions
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Lj1g3v1537650.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr1 18438536 18442346 -
2 domain predictions
 –
Lj1g3v1537650.2
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr1 18440596 18442346 -
2 domain predictions
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Lj1g3v1548830.1
n.a. Geranylgeranyl transferase type-2 subunit alpha [Medicago truncatula] gi|357465223|ref|XP_003602893.1| chr1 18562135 18566823 -
3 domain predictions
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Lj1g3v1686670.1
n.a. Disease resistance protein [Medicago truncatula] gi|357465601|ref|XP_003603085.1| chr1 19998154 20002147 -
3 domain predictions
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Lj1g3v1911780.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484477|ref|XP_003612526.1| chr1 22706045 22709873 +
3 domain predictions
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Lj1g3v1991630.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357519095|ref|XP_003629836.1| chr1 23470386 23474214 -
3 domain predictions
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Lj1g3v2012980.1
n.a. Nucleotide binding site leucine-rich repeat disease resistance protein [Medicago truncatula] gi|357463129|ref|XP_003601846.1| chr1 23609326 23633344 -
3 domain predictions
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Lj1g3v2012990.1
n.a. n.a. chr1 23610289 23637225 +
3 domain predictions
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Lj1g3v2012990.2
n.a. n.a. chr1 23629686 23637225 +
3 domain predictions
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Lj1g3v2013000.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357498303|ref|XP_003619440.1| chr1 23639207 23641491 -
3 domain predictions
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Lj1g3v2063030.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr1 24230273 24232073 -
2 domain predictions
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Lj1g3v2063060.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr1 24241180 24243436 -
2 domain predictions
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Lj1g3v2063100.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr1 24248769 24250876 -
2 domain predictions
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Lj1g3v2063160.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr1 24269816 24271159 -
2 domain predictions
 –
Lj1g3v2072070.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790-like [Glycine max] gi|356518354|ref|XP_003527844.1| chr1 24594650 24599026 -
3 domain predictions
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Lj1g3v2095470.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum] gi|502131757|ref|XP_004501091.1| chr1 24754477 24763730 +
3 domain predictions
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Lj1g3v2096140.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356510067|ref|XP_003523762.1| chr1 25083270 25086894 -
3 domain predictions
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Lj1g3v2096160.1
n.a. PREDICTED: receptor-like protein kinase HAIKU2-like [Glycine max] gi|356507963|ref|XP_003522732.1| chr1 25102415 25119448 -
3 domain predictions
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Lj1g3v2141160.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502131353|ref|XP_004500957.1| chr1 25859190 25863184 +
3 domain predictions
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Lj1g3v2143310.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502131353|ref|XP_004500957.1| chr1 25894101 25894472 +
3 domain predictions
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Lj1g3v2157650.1
n.a. Cyclin-like F-box [Medicago truncatula] gi|124359880|gb|ABD32480.2| chr1 26058328 26059326 +
2 domain predictions
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Lj1g3v2157660.1
n.a. PREDICTED: F-box protein SKIP19-like [Glycine max] gi|356546510|ref|XP_003541669.1| chr1 26059102 26059657 +
2 domain predictions
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Lj1g3v2312930.1
n.a. n.a. chr1 27184595 27206641 -
3 domain predictions
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Lj1g3v2312950.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356523290|ref|XP_003530273.1| chr1 27196031 27207565 +
3 domain predictions
 –