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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032675
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 2134 results. Now displaying 13 of 43 with 50 rows per page. This search has taken 5.813s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1534070.1
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356497605|ref|XP_003517650.1| chr2 24070110 24073994 -
3 domain predictions
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Lj2g3v1534070.2
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356497605|ref|XP_003517650.1| chr2 24070110 24074087 -
3 domain predictions
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Lj2g3v1535100.1
n.a. Disease resistance protein RPP8 [Medicago truncatula] gi|357484807|ref|XP_003612691.1| chr2 24085681 24089424 -
3 domain predictions
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Lj2g3v1535110.1
n.a. PREDICTED: disease resistance protein RPM1-like [Cicer arietinum] gi|502162289|ref|XP_004512454.1| chr2 24085858 24089424 -
3 domain predictions
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Lj2g3v1536320.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr2 24188368 24198454 -
3 domain predictions
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Lj2g3v1536330.2
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr2 24188607 24202153 -
3 domain predictions
 –
Lj2g3v1549570.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr2 24327316 24332933 +
3 domain predictions
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Lj2g3v1550030.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Cicer arietinum] gi|502162016|ref|XP_004512361.1| chr2 24504001 24515335 +
3 domain predictions
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Lj2g3v1550210.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24617165 24620297 +
3 domain predictions
 –
Lj2g3v1550220.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24623507 24631322 +
3 domain predictions
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Lj2g3v1550220.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24623507 24627465 +
3 domain predictions
 –
Lj2g3v1550260.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24647829 24651585 +
3 domain predictions
 –
Lj2g3v1550260.2
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24647829 24651585 +
3 domain predictions
 –
Lj2g3v1550290.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24661913 24665974 -
3 domain predictions
 –
Lj2g3v1550300.1
n.a. n.a. chr2 24661913 24665646 +
3 domain predictions
 –
Lj2g3v1550310.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356546810|ref|XP_003541815.1| chr2 24667552 24668108 -
3 domain predictions
 –
Lj2g3v1550330.1
n.a. n.a. chr2 24672572 24677456 +
3 domain predictions
 –
Lj2g3v1550360.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24680573 24684084 -
3 domain predictions
 –
Lj2g3v1550370.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24680573 24684084 -
3 domain predictions
 –
Lj2g3v1560730.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24836475 24839335 +
3 domain predictions
 –
Lj2g3v1560850.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1-like [Cicer arietinum] gi|502160581|ref|XP_004511796.1| chr2 24905599 24906056 -
3 domain predictions
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Lj2g3v1560910.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr2 24949047 24949964 -
3 domain predictions
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Lj2g3v1588550.1
n.a. PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max] gi|356538413|ref|XP_003537698.1| chr2 25230930 25234028 +
3 domain predictions
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Lj2g3v1645540.1
n.a. NBS/LRR resistance protein-like protein [Medicago truncatula] gi|357460465|ref|XP_003600514.1| chr2 25589220 25618717 -
3 domain predictions
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Lj2g3v1707560.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502161315|ref|XP_004512119.1| chr2 26400868 26405408 -
3 domain predictions
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Lj2g3v1717610.1
n.a. F-box protein SKIP19 [Medicago truncatula] gi|357439753|ref|XP_003590154.1| chr2 26432083 26436404 -
2 domain predictions
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Lj2g3v1728810.1
n.a. PREDICTED: disease resistance RPP8-like protein 3-like [Glycine max] gi|356496703|ref|XP_003517205.1| chr2 26547131 26554873 -
3 domain predictions
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Lj2g3v1830940.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Cicer arietinum] gi|502160966|ref|XP_004511973.1| chr2 27655374 27660378 +
3 domain predictions
 –
Lj2g3v1890920.1
n.a. F-box protein [Medicago truncatula] gi|357482823|ref|XP_003611698.1| chr2 28100082 28101879 +
2 domain predictions
 –
Lj2g3v1982930.1
n.a. PREDICTED: probable inactive receptor kinase At1g27190-like [Cicer arietinum] gi|502160599|ref|XP_004511805.1| chr2 28845024 28847149 +
3 domain predictions
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Lj2g3v1984140.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2-like [Glycine max] gi|356495521|ref|XP_003516625.1| chr2 28971468 28975119 -
2 domain predictions
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Lj2g3v1984370.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1-like [Cicer arietinum] gi|502160581|ref|XP_004511796.1| chr2 29015057 29019497 -
3 domain predictions
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Lj2g3v1984380.1
n.a. receptor-like protein kinase 3 precursor [Glycine max] gi|351726467|ref|NP_001235080.1| chr2 29015251 29019497 -
3 domain predictions
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Lj2g3v2002570.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357481915|ref|XP_003611243.1| chr2 30362464 30365880 +
3 domain predictions
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Lj2g3v2002860.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460-like [Cicer arietinum] gi|502160100|ref|XP_004511633.1| chr2 30521444 30524692 +
3 domain predictions
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Lj2g3v2017580.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] gi|356497232|ref|XP_003517466.1| chr2 30908167 30911940 +
3 domain predictions
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Lj2g3v2087830.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Cicer arietinum] gi|502139102|ref|XP_004503646.1| chr2 31369191 31372833 +
3 domain predictions
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Lj2g3v2088480.1
n.a. PREDICTED: F-box protein SKIP19-like [Glycine max] gi|356546510|ref|XP_003541669.1| chr2 31586032 31588004 -
2 domain predictions
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Lj2g3v2173020.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356498894|ref|XP_003518282.1| chr2 32631709 32634679 -
3 domain predictions
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Lj2g3v2233030.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357490913|ref|XP_003615744.1| chr2 32998196 33001698 +
3 domain predictions
 –
Lj2g3v2448220.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like isoform X1 [Cicer arietinum] gi|502129682|ref|XP_004500393.1| chr2 34598830 34608649 -
3 domain predictions
 –
Lj2g3v2736520.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357492663|ref|XP_003616620.1| chr2 36318689 36319986 +
3 domain predictions
 –
Lj2g3v2736530.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357492663|ref|XP_003616620.1| chr2 36318689 36319986 +
3 domain predictions
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Lj2g3v2794510.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] gi|356551399|ref|XP_003544063.1| chr2 36774910 36779183 -
3 domain predictions
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Lj2g3v2794510.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] gi|356551399|ref|XP_003544063.1| chr2 36774910 36779278 -
3 domain predictions
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Lj2g3v2843040.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr2 36979496 36982698 -
3 domain predictions
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Lj2g3v2879650.1
n.a. DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|357493253|ref|XP_003616915.1| chr2 37547054 37547998 +
2 domain predictions
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Lj2g3v2899850.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357490923|ref|XP_003615749.1| chr2 37597054 37601510 +
3 domain predictions
 –
Lj2g3v2899850.2
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357490913|ref|XP_003615744.1| chr2 37597054 37601510 +
3 domain predictions
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Lj2g3v2899990.1
n.a. F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|357510195|ref|XP_003625386.1| chr2 37654823 37655814 +
2 domain predictions
 –