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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001509
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We have found 135 results. Now displaying 3 of 3 with 50 rows per page. This search has taken 5.367s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0481500.1
n.a. Bifunctional polymyxin resistance protein ArnA; TAIR: AT1G08200.1 UDP-D-apiose/UDP-D-xylose synthase 2; Swiss-Prot: sp|Q9SGE0|AXS2_ARATH UDP-D-apiose/UDP-D-xylose synthase 2; TrEMBL-Plants: tr|A0A1J7GZT2|A0A1J7GZT2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481500 LjG1.1_chr3 89923132 89926974 -
2 domain predictions
2 GO terms
LotjaGi3g1v0515200.1
n.a. Dihydroflavonol 4-reductase; TAIR: AT2G21280.2 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9SJU9|GC1_ARATH Epimerase family protein SDR39U1 homolog, chloroplastic; TrEMBL-Plants: tr|I3T5A2|I3T5A2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0515200 LjG1.1_chr3 93236564 93242350 -
2 domain predictions
2 GO terms
LotjaGi3g1v0536900.1
n.a. Alcohol dehydrogenase-like protein; TAIR: AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|A0A0R0HDJ8|A0A0R0HDJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0536900 LjG1.1_chr3 95342754 95346295 +
2 domain predictions
2 GO terms
LotjaGi3g1v0536900.2
n.a. Cinnamyl alcohol dehydrogenase; TAIR: AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|I3T314|I3T314_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0536900 LjG1.1_chr3 95348134 95350550 +
2 domain predictions
2 GO terms
LotjaGi3g1v0536900.3
n.a. Cinnamyl alcohol dehydrogenase; TAIR: AT1G51410.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|I3T4I3|I3T4I3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0536900 LjG1.1_chr3 95348927 95363744 +
2 domain predictions
2 GO terms
LotjaGi3g1v0536900.6
n.a. Cinnamyl alcohol dehydrogenase; TAIR: AT1G51410.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|I3T4I3|I3T4I3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0536900 LjG1.1_chr3 95351871 95363744 +
2 domain predictions
2 GO terms
LotjaGi3g1v0536900.8
n.a. Alcohol dehydrogenase-like protein; TAIR: AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|I3T314|I3T314_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0536900 LjG1.1_chr3 95352032 95357815 +
2 domain predictions
2 GO terms
LotjaGi3g1v0536900.9
n.a. Dihydroflavonol-4-reductase; TAIR: AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|I3SP77|I3SP77_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0536900 LjG1.1_chr3 95352083 95353307 +
2 domain predictions
2 GO terms
LotjaGi3g1v0537100.1
n.a. Cinnamyl alcohol dehydrogenase; TAIR: AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|I3T4I3|I3T4I3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0537100 LjG1.1_chr3 95379967 95388015 +
2 domain predictions
2 GO terms
LotjaGi4g1v0045700.1
n.a. Anthocyanidin reductase; TAIR: AT1G61720.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q5FB34|ANRCS_VITVI Anthocyanidin reductase ((2S)-flavan-3-ol-forming); TrEMBL-Plants: tr|I3SIP5|I3SIP5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0045700 LjG1.1_chr4 5375619 5379240 +
2 domain predictions
2 GO terms
LotjaGi4g1v0215200.1
n.a. UDP-glucuronate 4-epimerase 4; TAIR: AT1G02000.1 UDP-D-glucuronate 4-epimerase 2; Swiss-Prot: sp|Q9LPC1|GAE2_ARATH UDP-glucuronate 4-epimerase 2; TrEMBL-Plants: tr|A0A072V0K9|A0A072V0K9_MEDTR UDP-D-glucuronate 4-epimerase; Found in the gene: LotjaGi4g1v0215200 LjG1.1_chr4 50302660 50307437 +
2 domain predictions
2 GO terms
LotjaGi5g1v0012200.1
n.a. GDP-mannose 3,5-epimerase; TAIR: AT1G19690.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|P0AD13|YEEZ_ECO57 Protein YeeZ; TrEMBL-Plants: tr|G7I5C0|G7I5C0_MEDTR NAD-dependent epimerase/dehydratase family protein; Found in the gene: LotjaGi5g1v0012200 LjG1.1_chr5 2674137 2685823 +
2 domain predictions
2 GO terms
LotjaGi5g1v0013400.1
n.a. Dihydroflavonol 4-reductase; TAIR: AT5G42800.1 dihydroflavonol 4-reductase; Swiss-Prot: sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase; TrEMBL-Plants: tr|Q58ZF2|Q58ZF2_LOTCO Dihydroflavonol reductase; Found in the gene: LotjaGi5g1v0013400 LjG1.1_chr5 2911541 2914334 +
2 domain predictions
2 GO terms
LotjaGi5g1v0013400.2
n.a. Dihydroflavonol 4-reductase; TAIR: AT5G42800.1 dihydroflavonol 4-reductase; Swiss-Prot: sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase; TrEMBL-Plants: tr|Q58ZF2|Q58ZF2_LOTCO Dihydroflavonol reductase; Found in the gene: LotjaGi5g1v0013400 LjG1.1_chr5 2911791 2914217 +
2 domain predictions
2 GO terms
LotjaGi5g1v0013500.1
n.a. Dihydroflavonol 4-reductase; TAIR: AT5G42800.1 dihydroflavonol 4-reductase; Swiss-Prot: sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase; TrEMBL-Plants: tr|Q403G6|Q403G6_LOTJA Dihydroflavonol 4-reductase; Found in the gene: LotjaGi5g1v0013500 LjG1.1_chr5 2918617 2932349 +
2 domain predictions
2 GO terms
LotjaGi5g1v0013700.1
n.a. Dihydroflavonol 4-reductase; TAIR: AT5G42800.1 dihydroflavonol 4-reductase; Swiss-Prot: sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase; TrEMBL-Plants: tr|Q403H0|Q403H0_LOTJA Dihydroflavonol 4-reductase; Found in the gene: LotjaGi5g1v0013700 LjG1.1_chr5 2935563 2944868 +
2 domain predictions
2 GO terms
LotjaGi5g1v0013800.1
n.a. Dihydroflavonol 4-reductase; TAIR: AT5G42800.1 dihydroflavonol 4-reductase; Swiss-Prot: sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase; TrEMBL-Plants: tr|Q403G5|Q403G5_LOTJA Dihydroflavonol 4-reductase; Found in the gene: LotjaGi5g1v0013800 LjG1.1_chr5 2946420 2950249 +
2 domain predictions
2 GO terms
LotjaGi5g1v0013800.2
n.a. Dihydroflavonol 4-reductase; TAIR: AT5G42800.1 dihydroflavonol 4-reductase; Swiss-Prot: sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase; TrEMBL-Plants: tr|Q403G5|Q403G5_LOTJA Dihydroflavonol 4-reductase; Found in the gene: LotjaGi5g1v0013800 LjG1.1_chr5 2946696 2949420 +
2 domain predictions
2 GO terms
LotjaGi5g1v0066900.1
n.a. Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|I1M9T9|I1M9T9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0066900 LjG1.1_chr5 11127103 11130659 -
2 domain predictions
2 GO terms
LotjaGi5g1v0066900.2
n.a. Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|I1M9T9|I1M9T9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0066900 LjG1.1_chr5 11127383 11130058 -
2 domain predictions
2 GO terms
LotjaGi5g1v0167000.1
n.a. Chloroplast stem-loop binding protein; TAIR: AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa; Swiss-Prot: sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic; TrEMBL-Plants: tr|G7IED1|G7IED1_MEDTR Stem-loop-binding protein of 41 kDa protein A; Found in the gene: LotjaGi5g1v0167000 LjG1.1_chr5 42603001 42605732 +
2 domain predictions
2 GO terms
LotjaGi5g1v0213200.1
n.a. GDP-mannose 3,5-epimerase; TAIR: AT5G28840.1 GDP-D-mannose 3',5'-epimerase; Swiss-Prot: sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1; TrEMBL-Plants: tr|A0A151U593|A0A151U593_CAJCA GDP-mannose 3,5-epimerase; Found in the gene: LotjaGi5g1v0213200 LjG1.1_chr5 51854919 51858399 +
2 domain predictions
2 GO terms
LotjaGi5g1v0213200.2
n.a. GDP-mannose 3,5-epimerase; TAIR: AT5G28840.1 GDP-D-mannose 3',5'-epimerase; Swiss-Prot: sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1; TrEMBL-Plants: tr|A0A151U593|A0A151U593_CAJCA GDP-mannose 3,5-epimerase; Found in the gene: LotjaGi5g1v0213200 LjG1.1_chr5 51855660 51857954 +
2 domain predictions
2 GO terms
LotjaGi5g1v0213200.3
n.a. GDP-mannose 3,5-epimerase; TAIR: AT5G28840.1 GDP-D-mannose 3',5'-epimerase; Swiss-Prot: sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1; TrEMBL-Plants: tr|A0A151U593|A0A151U593_CAJCA GDP-mannose 3,5-epimerase; Found in the gene: LotjaGi5g1v0213200 LjG1.1_chr5 51855705 51858239 +
2 domain predictions
2 GO terms
LotjaGi5g1v0213200.4
n.a. GDP-mannose 3,5-epimerase; TAIR: AT5G28840.1 GDP-D-mannose 3',5'-epimerase; Swiss-Prot: sp|Q2R1V8|GME2_ORYSJ GDP-mannose 3,5-epimerase 2; TrEMBL-Plants: tr|A0A151U593|A0A151U593_CAJCA GDP-mannose 3,5-epimerase; Found in the gene: LotjaGi5g1v0213200 LjG1.1_chr5 51855897 51857615 +
2 domain predictions
2 GO terms
LotjaGi5g1v0285900.1
n.a. Cinnamoyl-CoA reductase 4; TAIR: AT5G58490.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I3SMX7|I3SMX7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0285900 LjG1.1_chr5 60251075 60267173 -
2 domain predictions
2 GO terms
LotjaGi5g1v0285900.2
n.a. Cinnamoyl-CoA reductase 4; TAIR: AT5G58490.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I3SMX7|I3SMX7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0285900 LjG1.1_chr5 60252179 60262706 -
2 domain predictions
2 GO terms
LotjaGi6g1v0040500.1
n.a. UDP-glucuronate 4-epimerase 4; TAIR: AT3G23820.1 UDP-D-glucuronate 4-epimerase 6; Swiss-Prot: sp|Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6; TrEMBL-Plants: tr|G7JA85|G7JA85_MEDTR UDP-D-glucuronate 4-epimerase; Found in the gene: LotjaGi6g1v0040500 LjG1.1_chr6 7837505 7838857 -
2 domain predictions
2 GO terms
LotjaGi6g1v0051000.1
n.a. GDP-4-keto-6-deoxymannose-3, 5-epimerase-4-reductase; TAIR: AT1G17890.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9LMU0|FCL2_ARATH Putative GDP-L-fucose synthase 2; TrEMBL-Plants: tr|I1L759|I1L759_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051000 LjG1.1_chr6 9142634 9145094 -
2 domain predictions
2 GO terms
LotjaGi6g1v0107500.1
n.a. Cinnamoyl-CoA reductase-like protein; TAIR: AT5G58490.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I3SMX7|I3SMX7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0107500 LjG1.1_chr6 24428865 24433939 -
2 domain predictions
2 GO terms
LotjaGi6g1v0114500.1
n.a. Progesterone 5-beta-reductase; TAIR: AT5G58750.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase; TrEMBL-Plants: tr|A0A151UA08|A0A151UA08_CAJCA Uncharacterized protein C757.02c; Found in the gene: LotjaGi6g1v0114500 LjG1.1_chr6 27372496 27374572 +
2 domain predictions
2 GO terms
LotjaGi6g1v0277000.1
n.a. Cinnamoyl-CoA reductase; TAIR: AT2G02400.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|G7IFT8|G7IFT8_MEDTR Cinnamoyl-CoA reductase; Found in the gene: LotjaGi6g1v0277000 LjG1.1_chr6 59388929 59398175 +
2 domain predictions
2 GO terms
LotjaGi6g1v0277000.2
n.a. Cinnamoyl-CoA reductase; TAIR: AT2G02400.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|G7IFT8|G7IFT8_MEDTR Cinnamoyl-CoA reductase; Found in the gene: LotjaGi6g1v0277000 LjG1.1_chr6 59389040 59398175 +
2 domain predictions
2 GO terms
LotjaGi6g1v0346900.1
n.a. UDP-glucose 4-epimerase, putative; TAIR: AT1G30620.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1; TrEMBL-Plants: tr|I3T3Q3|I3T3Q3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0346900 LjG1.1_chr6 65953673 65965788 +
2 domain predictions
2 GO terms
LotjaGi6g1v0346900.2
n.a. UDP-glucose 4-epimerase, putative; TAIR: AT1G30620.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1; TrEMBL-Plants: tr|I3T3Q3|I3T3Q3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0346900 LjG1.1_chr6 65962497 65965455 +
2 domain predictions
2 GO terms