Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003593
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 1047 results. Now displaying 9 of 21 with 50 rows per page. This search has taken 6.640s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. ATP-dependent zinc metalloprotease FtsH; TAIR: AT5G64580.1 AAA-type ATPase family protein; Swiss-Prot: sp|F4KF14|FTSI4_ARATH Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic; TrEMBL-Plants: tr|V7AVN6|V7AVN6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0318200 LjG1.1_chr1 76642526 76650809 -
n.a. ATP-dependent zinc metalloprotease FtsH; TAIR: AT5G64580.1 AAA-type ATPase family protein; Swiss-Prot: sp|F4KF14|FTSI4_ARATH Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic; TrEMBL-Plants: tr|V7AVN6|V7AVN6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0318200 LjG1.1_chr1 76642526 76650909 -
n.a. ATP-dependent zinc metalloprotease FtsH; TAIR: AT5G64580.1 AAA-type ATPase family protein; Swiss-Prot: sp|F4KF14|FTSI4_ARATH Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic; TrEMBL-Plants: tr|V7AVN6|V7AVN6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0318200 LjG1.1_chr1 76642526 76650912 -
n.a. ATP-binding ABC transporter; TAIR: AT4G33460.1 ABC transporter family protein; Swiss-Prot: sp|Q8H1R4|AB10I_ARATH ABC transporter I family member 10, chloroplastic; TrEMBL-Plants: tr|I1KBJ4|I1KBJ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0319200 LjG1.1_chr1 76868978 76872169 +
n.a. ATP-binding ABC transporter; TAIR: AT4G33460.1 ABC transporter family protein; Swiss-Prot: sp|Q8H1R4|AB10I_ARATH ABC transporter I family member 10, chloroplastic; TrEMBL-Plants: tr|G7JBL0|G7JBL0_MEDTR ATP-binding ABC transporter; Found in the gene: LotjaGi1g1v0319200 LjG1.1_chr1 76868978 76872169 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77592516 77602886 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77592516 77603139 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77596012 77603018 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q9FI14|TAO1_ARATH Disease resistance protein TAO1; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77596016 77602341 -
n.a. ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G51070.1 Clp ATPase; Swiss-Prot: sp|P42762|CLPD_ARATH Chaperone protein ClpD, chloroplastic; TrEMBL-Plants: tr|I1JXT1|I1JXT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0330800 LjG1.1_chr1 78660324 78667371 -
n.a. ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333900 LjG1.1_chr1 79247438 79255010 +
n.a. ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|A0A0L9UEV5|A0A0L9UEV5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333900 LjG1.1_chr1 79247590 79254989 +
n.a. ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333900 LjG1.1_chr1 79248894 79254523 +
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G26140.1 FTSH protease 4; Swiss-Prot: sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial; TrEMBL-Plants: tr|G7J7N5|G7J7N5_MEDTR ATP-dependent zinc metalloprotease FTSH protein; Found in the gene: LotjaGi1g1v0367100 LjG1.1_chr1 84492603 84503675 -
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G26140.1 FTSH protease 4; Swiss-Prot: sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial; TrEMBL-Plants: tr|G7J7N5|G7J7N5_MEDTR ATP-dependent zinc metalloprotease FTSH protein; Found in the gene: LotjaGi1g1v0367100 LjG1.1_chr1 84493024 84503460 -
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G26140.1 FTSH protease 4; Swiss-Prot: sp|Q8LQJ8|FTSH5_ORYSJ ATP-dependent zinc metalloprotease FTSH 5, mitochondrial; TrEMBL-Plants: tr|A0A0B2Q6R4|A0A0B2Q6R4_GLYSO ATP-dependent zinc metalloprotease FTSH 4, mitochondrial; Found in the gene: LotjaGi1g1v0367700_LC LjG1.1_chr1 84589466 84595887 -
n.a. ATP-dependent chaperone ClpB; TAIR: AT2G25140.1 casein lytic proteinase B4; Swiss-Prot: sp|Q8VYJ7|CLPB4_ARATH Chaperone protein ClpB4, mitochondrial; TrEMBL-Plants: tr|I1JU82|I1JU82_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0378600 LjG1.1_chr1 85840257 85852851 -
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|I1K8Y7|I1K8Y7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0387600 LjG1.1_chr1 87085497 87096881 +
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A; TrEMBL-Plants: tr|A0A072VDE6|A0A072VDE6_MEDTR 26S proteasome regulatory particle triple-A ATPase protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91683625 91689197 -
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A; TrEMBL-Plants: tr|A9PEV6|A9PEV6_POPTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91684228 91688370 -
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.2 AAA-type ATPase family protein; Swiss-Prot: sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B; TrEMBL-Plants: tr|B3H533|B3H533_ARATH AAA-type ATPase family protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91684228 91689103 -
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A; TrEMBL-Plants: tr|A9PEV6|A9PEV6_POPTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91684228 91689103 -
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A; TrEMBL-Plants: tr|A0A0L9V939|A0A0L9V939_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91684228 91689103 -
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600 LjG1.1_chr1 92003098 92008521 +
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600 LjG1.1_chr1 92003213 92007530 +
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600 LjG1.1_chr1 92003335 92007530 +
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600 LjG1.1_chr1 92003648 92007530 +
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT5G42270.1 FtsH extracellular protease family; Swiss-Prot: sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic; TrEMBL-Plants: tr|A0A067KL39|A0A067KL39_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0434400 LjG1.1_chr1 92887979 92894584 +
n.a. Katanin p60 ATPase-containing subunit, putative; TAIR: AT2G45500.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q6AZT2|SPAST_XENLA Spastin; TrEMBL-Plants: tr|V7B672|V7B672_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0464200 LjG1.1_chr1 97044037 97050095 -
n.a. Katanin p60 ATPase-containing subunit, putative; TAIR: AT2G45500.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q6AZT2|SPAST_XENLA Spastin; TrEMBL-Plants: tr|V7B672|V7B672_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0464200 LjG1.1_chr1 97044323 97049963 -
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27220.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|O81825|DRL28_ARATH Probable disease resistance protein At4g27220; TrEMBL-Plants: tr|R4HD36|R4HD36_SOYBN Rpp4 candidate R5; Found in the gene: LotjaGi1g1v0468600 LjG1.1_chr1 97911695 97931070 +
n.a. Methionine import ATP-binding protein MetN; TAIR: AT1G65410.1 non-intrinsic ABC protein 11; Swiss-Prot: sp|Q9AT00|TGD3_ARATH Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic; TrEMBL-Plants: tr|I3TAB8|I3TAB8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0483800 LjG1.1_chr1 99725522 99733043 +
n.a. ATP-dependent zinc metalloprotease FtsH; TAIR: AT5G40010.1 AAA-ATPase 1; Swiss-Prot: sp|Q9FLD5|ASD_ARATH AAA-ATPase ASD, mitochondrial; TrEMBL-Plants: tr|A0A0L9U3C7|A0A0L9U3C7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0497300 LjG1.1_chr1 101274328 101276532 +
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT5G15250.1 FTSH protease 6; Swiss-Prot: sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic; TrEMBL-Plants: tr|I1N4D7|I1N4D7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0503600 LjG1.1_chr1 102128782 102132874 -
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A151TCE6|A0A151TCE6_CAJCA Chaperone protein clpB 2; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813727 102820891 -
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A151TCE6|A0A151TCE6_CAJCA Chaperone protein clpB 2; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813964 102817888 -
n.a. Chaperone clpb, putative; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A1J7HJB5|A0A1J7HJB5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813964 102819645 -
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A072U702|A0A072U702_MEDTR Casein lytic proteinase B3; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813964 102819967 -
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A072U702|A0A072U702_MEDTR Casein lytic proteinase B3; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813964 102819968 -
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|I1N529|I1N529_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106226376 106243222 +
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|I1N529|I1N529_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106226778 106242254 +
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|I1N529|I1N529_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106226778 106242254 +
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|A0A151S7G0|A0A151S7G0_CAJCA ABC transporter B family member 20; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106226781 106234007 +
n.a. ABC transporter ATP-binding protein; TAIR: AT3G55320.1 P-glycoprotein 20; Swiss-Prot: sp|Q9M3B9|AB20B_ARATH ABC transporter B family member 20; TrEMBL-Plants: tr|I1JDS0|I1JDS0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0534000 LjG1.1_chr1 106229123 106242254 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UH68|A0A072UH68_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0573000 LjG1.1_chr1 110648357 110671895 -
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|F4I594|RLM1A_ARATH Disease resistance protein RML1A; TrEMBL-Plants: tr|V7C098|V7C098_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0607900 LjG1.1_chr1 115251140 115255321 +
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170; TrEMBL-Plants: tr|K7MWR8|K7MWR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0608100 LjG1.1_chr1 115262091 115271943 +
n.a. ATP-binding ABC transporter; TAIR: AT1G70610.2 transporter associated with antigen processing protein 1; Swiss-Prot: sp|Q8RY46|AB26B_ARATH ABC transporter B family member 26, chloroplastic; TrEMBL-Plants: tr|A0A072TY73|A0A072TY73_MEDTR ATP-binding ABC transporter; Found in the gene: LotjaGi1g1v0610900 LjG1.1_chr1 115554883 115562558 -
n.a. ABC transporter ATP-binding protein; TAIR: AT5G14100.1 non-intrinsic ABC protein 14; Swiss-Prot: sp|Q8LEF6|AB11I_ARATH ABC transporter I family member 11, chloroplastic; TrEMBL-Plants: tr|A0A0S3RW12|A0A0S3RW12_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0627000 LjG1.1_chr1 117597766 117614995 +
n.a. ABC transporter ATP-binding protein; TAIR: AT5G14100.1 non-intrinsic ABC protein 14; Swiss-Prot: sp|Q8LEF6|AB11I_ARATH ABC transporter I family member 11, chloroplastic; TrEMBL-Plants: tr|A0A0S3RW12|A0A0S3RW12_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0627000 LjG1.1_chr1 117597797 117613892 +