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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR015660
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 30 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.358s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0202299.1
n.a. PREDICTED: transcription factor ORG2-like [Glycine max] gi|356504732|ref|XP_003521149.1| chr0 100143771 100145505 +
2 domain predictions
2 GO terms
Lj0g3v0202329.1
n.a. PREDICTED: transcription factor ORG2-like [Glycine max] gi|356504732|ref|XP_003521149.1| chr0 100153134 100154196 +
2 domain predictions
2 GO terms
Lj0g3v0202359.1
n.a. PREDICTED: transcription factor ORG3-like [Cicer arietinum] gi|502108260|ref|XP_004493429.1| chr0 100162767 100163819 +
2 domain predictions
2 GO terms
Lj0g3v0202379.2
n.a. PREDICTED: transcription factor ORG2-like [Glycine max] gi|356504732|ref|XP_003521149.1| chr0 100169037 100170677 +
2 domain predictions
2 GO terms
Lj0g3v0277549.3
n.a. PREDICTED: transcription factor bHLH36-like [Glycine max] gi|356544962|ref|XP_003540915.1| chr0 144067014 144080874 +
2 domain predictions
2 GO terms
Lj2g3v0463790.1
n.a. PREDICTED: transcription factor bHLH126-like [Glycine max] gi|356530923|ref|XP_003534028.1| chr2 6670113 6672014 -
2 domain predictions
2 GO terms
Lj2g3v0473830.1
n.a. PREDICTED: transcription factor bHLH126-like [Glycine max] gi|356559901|ref|XP_003548234.1| chr2 6691304 6693183 -
2 domain predictions
2 GO terms
Lj5g3v1351980.1
n.a. PREDICTED: transcription factor bHLH36-like [Glycine max] gi|356544962|ref|XP_003540915.1| chr5 20599702 20600558 +
2 domain predictions
2 GO terms
Lj5g3v2030790.1
n.a. PREDICTED: transcription factor bHLH36-like [Glycine max] gi|356535929|ref|XP_003536494.1| chr5 28833081 28834754 -
2 domain predictions
2 GO terms
Lj5g3v2030790.2
n.a. PREDICTED: transcription factor bHLH36-like [Glycine max] gi|356535929|ref|XP_003536494.1| chr5 28833081 28834754 -
2 domain predictions
2 GO terms
Lj5g3v2030810.1
n.a. Transcription factor bHLH120 [Medicago truncatula] gi|357444223|ref|XP_003592389.1| chr5 28838361 28840430 -
2 domain predictions
2 GO terms
Lj5g3v2030810.2
n.a. Transcription factor bHLH120 [Medicago truncatula] gi|357444223|ref|XP_003592389.1| chr5 28838361 28840430 -
2 domain predictions
2 GO terms
Lj5g3v2030840.1
n.a. PREDICTED: transcription factor bHLH126-like isoform X1 [Cicer arietinum] gi|502119497|ref|XP_004496640.1| chr5 28846231 28849102 +
2 domain predictions
2 GO terms
Lj6g3v2019730.1
n.a. Transcription factor bHLH36 [Medicago truncatula] gi|357446631|ref|XP_003593591.1| chr6 23927922 23929867 -
2 domain predictions
2 GO terms
LotjaGi1g1v0580900.1
n.a. Basic helix-loop-helix (BHLH) DNA-binding superfamily protein; TAIR: AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2; TrEMBL-Plants: tr|I3T1X1|I3T1X1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0580900 LjG1.1_chr1 112036266 112039632 +
2 domain predictions
2 GO terms
LotjaGi1g1v0667100.1
n.a. Basic helix-loop-helix transcription factor; TAIR: AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2; TrEMBL-Plants: tr|I3T1X1|I3T1X1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0667100 LjG1.1_chr1 122969248 122972392 +
2 domain predictions
2 GO terms
LotjaGi1g1v0667200.1
n.a. Basic helix-loop-helix transcription factor; TAIR: AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2; TrEMBL-Plants: tr|I3T1X1|I3T1X1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0667200 LjG1.1_chr1 122979038 122980616 +
2 domain predictions
2 GO terms
LotjaGi1g1v0667200.2
n.a. Basic helix-loop-helix transcription factor; TAIR: AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2; TrEMBL-Plants: tr|I3T1X1|I3T1X1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0667200 LjG1.1_chr1 122979172 122980552 +
2 domain predictions
2 GO terms
LotjaGi1g1v0667300.1
n.a. Basic helix-loop-helix transcription factor; TAIR: AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2; TrEMBL-Plants: tr|I3SH10|I3SH10_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0667300 LjG1.1_chr1 122987222 122990508 +
2 domain predictions
2 GO terms
LotjaGi1g1v0667400.1
n.a. Basic helix-loop-helix transcription factor; TAIR: AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2; TrEMBL-Plants: tr|I3T1X1|I3T1X1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0667400 LjG1.1_chr1 122994683 122996573 +
2 domain predictions
2 GO terms
LotjaGi2g1v0153100.1
n.a. basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120; TrEMBL-Plants: tr|A0A0S3TB41|A0A0S3TB41_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0153100 LjG1.1_chr2 55050463 55052160 -
2 domain predictions
2 GO terms
LotjaGi2g1v0153700.1
n.a. Basic helix-loop-helix transcription factor; TAIR: AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36; TrEMBL-Plants: tr|I1MQ59|I1MQ59_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0153700 LjG1.1_chr2 55107719 55110463 +
2 domain predictions
2 GO terms
LotjaGi3g1v0453200.1
n.a. basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36; TrEMBL-Plants: tr|I1LS39|I1LS39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0453200 LjG1.1_chr3 86653210 86655129 -
2 domain predictions
2 GO terms
LotjaGi3g1v0453200.2
n.a. Basic helix-loop-helix transcription factor; TAIR: AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|A9N1T2|ERA_SALPB GTPase Era; TrEMBL-Plants: tr|I1LS39|I1LS39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0453200 LjG1.1_chr3 86653217 86667124 -
2 domain predictions
2 GO terms
LotjaGi5g1v0307300.1
n.a. Basic helix-loop-helix transcription factor; TAIR: AT5G51780.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36; TrEMBL-Plants: tr|K7LL60|K7LL60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0307300 LjG1.1_chr5 62529507 62535237 -
2 domain predictions
2 GO terms
LotjaGi5g1v0307300.2
n.a. Basic helix-loop-helix transcription factor; TAIR: AT5G51780.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36; TrEMBL-Plants: tr|K7LL60|K7LL60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0307300 LjG1.1_chr5 62532248 62534414 -
2 domain predictions
2 GO terms
LotjaGi5g1v0307400.1
n.a. Basic helix-loop-helix transcription factor; TAIR: AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120; TrEMBL-Plants: tr|I1NGM8|I1NGM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0307400 LjG1.1_chr5 62536113 62539991 -
2 domain predictions
2 GO terms
LotjaGi5g1v0307400.2
n.a. Basic helix-loop-helix transcription factor; TAIR: AT5G51780.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36; TrEMBL-Plants: tr|I1NGM8|I1NGM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0307400 LjG1.1_chr5 62536113 62539991 -
2 domain predictions
2 GO terms
LotjaGi5g1v0307500.1
n.a. basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT5G51780.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36; TrEMBL-Plants: tr|G7ID49|G7ID49_MEDTR Transcription factor; Found in the gene: LotjaGi5g1v0307500 LjG1.1_chr5 62545760 62548895 +
2 domain predictions
2 GO terms
LotjaGi6g1v0330900.1
n.a. Basic helix-loop-helix transcription factor; TAIR: AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36; TrEMBL-Plants: tr|I3T3N0|I3T3N0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0330900 LjG1.1_chr6 64605178 64607889 -
2 domain predictions
2 GO terms