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PF05958

Description

tRNA (Uracil-5-)-methyltransferase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
Molecular function RNA methyltransferase activity Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
23S rRNA (uracil-5-)-methyltransferase rumA [Medicago truncatula] gi|357454725|ref|XP_003597643.1| 13
PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356541487|ref|XP_003539207.1| 24
PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356544604|ref|XP_003540739.1| 24
23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT2G28450.1 zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q8L7S3|C3H24_ARATH Zinc finger CCCH domain-containing protein 24; TrEMBL-Plants: tr|K7LTE4|K7LTE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0360600 23
23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT3G21300.1 RNA methyltransferase family protein; Swiss-Prot: sp|Q8KGF9|Y009_CHLTE Uncharacterized RNA methyltransferase CT0009; TrEMBL-Plants: tr|G7IHW5|G7IHW5_MEDTR 23S rRNA (Uracil-5)-methyltransferase RumA; Found in the gene: LotjaGi3g1v0022800 18
23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT3G21300.1 RNA methyltransferase family protein; Swiss-Prot: sp|Q8KGF9|Y009_CHLTE Uncharacterized RNA methyltransferase CT0009; TrEMBL-Plants: tr|G7IHW5|G7IHW5_MEDTR 23S rRNA (Uracil-5)-methyltransferase RumA; Found in the gene: LotjaGi3g1v0022800 18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd02440 CDD 1 16.67