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PTHR10501

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 25

Transcript Name Description Predicted domains Domain count
Lj0g3v0240409.2
– RNA-binding protein with multiple splicing [Medicago truncatula] gi|358345383|ref|XP_003636759.1|
Domains
12
Lj1g3v1008810.1
– RNA-binding protein with multiple splicing [Medicago truncatula] gi|357464013|ref|XP_003602288.1|
Domains
9
Lj1g3v1008810.2
– RNA-binding protein with multiple splicing [Medicago truncatula] gi|357464011|ref|XP_003602287.1|
Domains
12
Lj1g3v1787550.1
– PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer arietinum] gi|502132626|ref|XP_004501453.1|
Domains
12
Lj2g3v0592880.1
– PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer arietinum] gi|502112588|ref|XP_004494379.1|
Domains
13
Lj2g3v2365820.1
– PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cicer arietinum] gi|502096271|ref|XP_004490682.1|
Domains
12
Lj3g3v0420620.1
– PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer arietinum] gi|502132626|ref|XP_004501453.1|
Domains
12
Lj5g3v1959090.1
– RNA-binding protein with multiple splicing [Medicago truncatula] gi|357443729|ref|XP_003592142.1|
Domains
11
LotjaGi1g1v0111500.1
– Small nuclear ribonucleoprotein; TAIR: AT2G30260.1 U2 small nuclear ribonucleoprotein B; Swiss-Prot: sp|O22922|RU2B1_ARATH U2 small nuclear ribonucleoprotein B''; TrEMBL-Plants: tr|A0A1J7HLK6|A0A1J7HLK6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0111500
Domains
14
LotjaGi1g1v0111500.2
– Small nuclear ribonucleoprotein; TAIR: AT2G30260.1 U2 small nuclear ribonucleoprotein B; Swiss-Prot: sp|O22922|RU2B1_ARATH U2 small nuclear ribonucleoprotein B''; TrEMBL-Plants: tr|A0A1J7HLK6|A0A1J7HLK6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0111500
Domains
13
LotjaGi1g1v0290400.1
– RNA-binding family protein; TAIR: AT1G21320.2 nucleic acid/nucleotide binding protein; Swiss-Prot: sp|Q8H0P8|RBP1_MEDTR RNA-binding protein 1; TrEMBL-Plants: tr|I3SLA2|I3SLA2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0290400
Domains
12
LotjaGi1g1v0368600.1
– RNA-binding family protein; TAIR: AT1G21320.1 nucleic acid/nucleotide binding protein; Swiss-Prot: sp|Q8H0P8|RBP1_MEDTR RNA-binding protein 1; TrEMBL-Plants: tr|I3T8X8|I3T8X8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0368600
Domains
12
LotjaGi1g1v0764200.1
– Small nuclear ribonucleoprotein; TAIR: AT2G47580.1 spliceosomal protein U1A; Swiss-Prot: sp|Q39244|RU1A_ARATH U1 small nuclear ribonucleoprotein A; TrEMBL-Plants: tr|A0A151TXR0|A0A151TXR0_CAJCA U1 small nuclear ribonucleoprotein A; Found in the gene: LotjaGi1g1v0764200
Domains
13
LotjaGi1g1v0764200.2
– Small nuclear ribonucleoprotein; TAIR: AT2G47580.1 spliceosomal protein U1A; Swiss-Prot: sp|Q39244|RU1A_ARATH U1 small nuclear ribonucleoprotein A; TrEMBL-Plants: tr|A0A151TXR0|A0A151TXR0_CAJCA U1 small nuclear ribonucleoprotein A; Found in the gene: LotjaGi1g1v0764200
Domains
13
LotjaGi1g1v0764200.3
– RNA-binding protein, putative; TAIR: AT2G47580.1 spliceosomal protein U1A; Swiss-Prot: sp|A2Y0J7|RU1A_ORYSI U1 small nuclear ribonucleoprotein A; TrEMBL-Plants: tr|A0A151TXR0|A0A151TXR0_CAJCA U1 small nuclear ribonucleoprotein A; Found in the gene: LotjaGi1g1v0764200
Domains
15
LotjaGi1g1v0764200.4
– Small nuclear ribonucleoprotein; TAIR: AT2G47580.1 spliceosomal protein U1A; Swiss-Prot: sp|Q39244|RU1A_ARATH U1 small nuclear ribonucleoprotein A; TrEMBL-Plants: tr|A0A151TXR0|A0A151TXR0_CAJCA U1 small nuclear ribonucleoprotein A; Found in the gene: LotjaGi1g1v0764200
Domains
14
LotjaGi1g1v0764200.5
– Small nuclear ribonucleoprotein; TAIR: AT2G47580.1 spliceosomal protein U1A; Swiss-Prot: sp|Q39244|RU1A_ARATH U1 small nuclear ribonucleoprotein A; TrEMBL-Plants: tr|A0A151TXR0|A0A151TXR0_CAJCA U1 small nuclear ribonucleoprotein A; Found in the gene: LotjaGi1g1v0764200
Domains
13
LotjaGi1g1v0764200.6
– Small nuclear ribonucleoprotein; TAIR: AT2G47580.1 spliceosomal protein U1A; Swiss-Prot: sp|Q39244|RU1A_ARATH U1 small nuclear ribonucleoprotein A; TrEMBL-Plants: tr|A0A072UF39|A0A072UF39_MEDTR Small nuclear ribonucleoprotein; Found in the gene: LotjaGi1g1v0764200
Domains
12
LotjaGi2g1v0134500.1
– RNA-binding family protein; TAIR: AT1G21320.2 nucleic acid/nucleotide binding protein; Swiss-Prot: sp|Q8H0P8|RBP1_MEDTR RNA-binding protein 1; TrEMBL-Plants: tr|I3SXG7|I3SXG7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0134500
Domains
12
LotjaGi2g1v0403900.1
– RNA binding protein, putative; TAIR: AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q8VC52|RBPS2_MOUSE RNA-binding protein with multiple splicing 2; TrEMBL-Plants: tr|K7LN66|K7LN66_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0403900
Domains
13
LotjaGi3g1v0343300.1
– RNA-binding family protein; TAIR: AT3G21215.3 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q93062|RBPMS_HUMAN RNA-binding protein with multiple splicing; TrEMBL-Plants: tr|G7JVK2|G7JVK2_MEDTR RNA recognition motif; Found in the gene: LotjaGi3g1v0343300
Domains
13
LotjaGi3g1v0343300.2
– RNA-binding family protein; TAIR: AT3G21215.3 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q93062|RBPMS_HUMAN RNA-binding protein with multiple splicing; TrEMBL-Plants: tr|K7L852|K7L852_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0343300
Domains
13
LotjaGi3g1v0343300.3
– RNA-binding family protein; TAIR: AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O74452|SCW1_SCHPO Cell wall integrity protein scw1; TrEMBL-Plants: tr|I3T1I3|I3T1I3_MEDTR Uncharacterized protein; Found in the gene: LotjaGi3g1v0343300
Domains
13
LotjaGi3g1v0426200.1
– RNA-binding family protein; TAIR: AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9YGP5|RBPS2_XENLA RNA-binding protein with multiple splicing 2; TrEMBL-Plants: tr|I3S8G5|I3S8G5_MEDTR Small nuclear ribonucleoprotein; Found in the gene: LotjaGi3g1v0426200
Domains
13
LotjaGi5g1v0293300.1
– RNA-binding family protein; TAIR: AT1G21320.2 nucleic acid/nucleotide binding protein; Swiss-Prot: sp|G7ID19|RBP2_MEDTR RNA-binding protein 2; TrEMBL-Plants: tr|T2DMS5|T2DMS5_PHAVU RNA-binding protein with multiple splicing; Found in the gene: LotjaGi5g1v0293300
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd12420 CDD 1 4.00