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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3357590 |
| Transcript ID | Lj1g3v3357590.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] gi|357467443|ref|XP_003604006.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 83 | 83 | – | – | |
| Coils | 15 | 35 | 21 | – | – | |
| PANTHER | 43 | 618 | 576 | 0 | – | |
| PANTHER | 43 | 618 | 576 | 0 | – | |
| Gene3D | 88 | 145 | 58 | 3.20E-10 | ||
| SUPERFAMILY | 90 | 143 | 54 | 4.43E-08 | ||
| ProSiteProfiles | 91 | 157 | 67 | 8.76 | ||
| SMART | 93 | 139 | 47 | 3.20E-08 | ||
| CDD | 93 | 138 | 46 | 5.16E-22 | – | |
| ProSitePatterns | 94 | 154 | 61 | – | ||
| MobiDBLite | 254 | 290 | 37 | – | – | |
| SUPERFAMILY | 310 | 390 | 81 | 1.90E-20 | ||
| Gene3D | 313 | 397 | 85 | 1.70E-25 | ||
| Pfam | 316 | 389 | 74 | 1.60E-15 | ||
| SMART | 333 | 394 | 62 | 0.0015 | ||
| MobiDBLite | 416 | 439 | 24 | – | – | |
| SMART | 450 | 560 | 111 | 6.60E-47 | ||
| ProSiteProfiles | 450 | 583 | 134 | 28.314 | ||
| SUPERFAMILY | 451 | 579 | 129 | 2.22E-33 | ||
| Pfam | 455 | 558 | 104 | 1.70E-23 | ||
| MobiDBLite | 625 | 695 | 71 | – | – | |
| MobiDBLite | 727 | 764 | 38 | – | – | |
| SUPERFAMILY | 788 | 849 | 62 | 1.70E-18 | ||
| PANTHER | 790 | 798 | 9 | 0 | – | |
| PANTHER | 790 | 798 | 9 | 0 | – | |
| CDD | 796 | 851 | 56 | 2.87E-17 | ||
| ProSiteProfiles | 796 | 850 | 55 | 16.198 | ||
| Gene3D | 797 | 850 | 54 | 3.50E-18 | ||
| SMART | 797 | 852 | 56 | 1.20E-18 | ||
| Pfam | 798 | 842 | 45 | 1.50E-13 | ||
| MobiDBLite | 911 | 944 | 34 | – | – | |
| MobiDBLite | 986 | 1011 | 26 | – | – | |
| MobiDBLite | 1063 | 1090 | 28 | – | – | |
| MobiDBLite | 1232 | 1294 | 63 | – | – | |
| ProSiteProfiles | 1287 | 1312 | 26 | 11.864 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj1g3v3357590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3357590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.