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GO:0005732

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Small nucleolar ribonucleoprotein complex
Full defintion A ribonucleoprotein complex that contains an RNA molecule of the small nucleolar RNA (snoRNA) family and associated proteins. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type.
Subterm of

Relationships

The relationship of GO:0005732 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0005732, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah
ISBN
The RNA WorldThe RNA World

Thomas R. Cech,Raymond F. Gesteland,John Fuller Atkins · ISBN: 0879695897

, 1999 · 0 pages

As both an informational molecule and a catalyst, RNA may hold clues to the emergence of genetic self-replication and the origins of life. The first, 1993 edition of this important work was acclaimed as unique and authoritative. The new edition has been revised, updated, and extended, and offers a completely current perspective on the modern world of RNA and the light it sheds on a prebiotic era perhaps dominated by this extraordinarily versatile molecule. This book is essential reading for everyone interested in the biology of nucleic acids, and is a valuable resource for teaching as well as investigative science.

Associated Lotus transcripts 11

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0298839.1
– PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max] gi|356562363|ref|XP_003549441.1|
GO terms
2
Lj4g3v1476180.1
– PREDICTED: U3 small nucleolar ribonucleoprotein protein MPP10-like [Cicer arietinum] gi|502152331|ref|XP_004508876.1|
GO terms
4
Lj4g3v1476180.2
– PREDICTED: U3 small nucleolar ribonucleoprotein protein MPP10-like [Cicer arietinum] gi|502152331|ref|XP_004508876.1|
GO terms
4
Lj5g3v0292810.1
– PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max] gi|356562363|ref|XP_003549441.1|
GO terms
2
Lj5g3v0292810.2
– PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max] gi|356562363|ref|XP_003549441.1|
GO terms
2
LotjaGi3g1v0253500.1
– U6 snRNA-associated Sm-like protein; TAIR: AT2G43810.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|O22823|LSM6B_ARATH Sm-like protein LSM36B; TrEMBL-Plants: tr|I3SM22|I3SM22_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0253500
GO terms
2
LotjaGi3g1v0441300.1
– H/ACA ribonucleoprotein complex non-core subunit NAF1; TAIR: AT1G03530.1 nuclear assembly factor 1; Swiss-Prot: sp|Q96HR8|NAF1_HUMAN H/ACA ribonucleoprotein complex non-core subunit NAF1; TrEMBL-Plants: tr|A0A1J7HBW8|A0A1J7HBW8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0441300
GO terms
4
LotjaGi3g1v0458700.1
– H/ACA ribonucleoprotein complex non-core subunit NAF1; TAIR: AT1G03530.1 nuclear assembly factor 1; Swiss-Prot: sp|Q96HR8|NAF1_HUMAN H/ACA ribonucleoprotein complex non-core subunit NAF1; TrEMBL-Plants: tr|K7LU49|K7LU49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0458700
GO terms
4
LotjaGi4g1v0232200.1
– U3 small nucleolar ribonucleoprotein protein MPP10; TAIR: AT5G66540.1 U3 small nucleolar ribonucleoprotein; Swiss-Prot: sp|O00566|MPP10_HUMAN U3 small nucleolar ribonucleoprotein protein MPP10; TrEMBL-Plants: tr|M1BJB9|M1BJB9_SOLTU U3 small nucleolar ribonucleoprotein protein MPP10; Found in the gene: LotjaGi4g1v0232200
GO terms
4
LotjaGi4g1v0301200.1
– Small nuclear ribonucleoprotein; TAIR: AT4G30220.1 small nuclear ribonucleoprotein F; Swiss-Prot: sp|Q9SUM2|RUXF_ARATH Probable small nuclear ribonucleoprotein F; TrEMBL-Plants: tr|I3SY08|I3SY08_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0301200
GO terms
2
LotjaGi5g1v0029600.1
– Small nuclear ribonucleoprotein; TAIR: AT4G30220.1 small nuclear ribonucleoprotein F; Swiss-Prot: sp|Q9SUM2|RUXF_ARATH Probable small nuclear ribonucleoprotein F; TrEMBL-Plants: tr|I3SY08|I3SY08_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0029600
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0005732
Cellular component Small nucleolar ribonucleoprotein complex 1 9.09