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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1820910 |
| Transcript ID | Lj1g3v1820910.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine max] gi|356515042|ref|XP_003526210.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 44 | 95 | 52 | 5.00E-12 | ||
| SMART | 52 | 95 | 44 | 2.20E-08 | ||
| SUPERFAMILY | 65 | 176 | 112 | 6.68E-18 | ||
| SMART | 98 | 167 | 70 | 2.80E-06 | ||
| ProSiteProfiles | 99 | 181 | 83 | 10.241 | ||
| Gene3D | 100 | 174 | 75 | 5.80E-11 | – | |
| Pfam | 125 | 158 | 34 | 1.30E-10 | ||
| PANTHER | 129 | 248 | 120 | 3.00E-293 | – | |
| PANTHER | 129 | 248 | 120 | 3.00E-293 | – | |
| CDD | 129 | 172 | 44 | 1.56E-07 | – | |
| SUPERFAMILY | 176 | 242 | 67 | 7.33E-15 | ||
| Gene3D | 188 | 246 | 59 | 1.90E-15 | – | |
| SMART | 189 | 244 | 56 | 1.90E-14 | ||
| ProSiteProfiles | 191 | 251 | 61 | 11.345 | ||
| Pfam | 192 | 241 | 50 | 2.20E-14 | ||
| CDD | 193 | 240 | 48 | 1.33E-09 | – | |
| PANTHER | 264 | 787 | 524 | 3.00E-293 | – | |
| PANTHER | 264 | 787 | 524 | 3.00E-293 | – | |
| SUPERFAMILY | 273 | 518 | 246 | 3.47E-53 | ||
| SMART | 282 | 495 | 214 | 1.10E-32 | ||
| Gene3D | 282 | 481 | 200 | 2.10E-27 | ||
| ProSiteProfiles | 298 | 484 | 187 | 23.166 | ||
| CDD | 306 | 466 | 161 | 4.12E-20 | – | |
| Pfam | 307 | 585 | 279 | 1.70E-64 | ||
| SUPERFAMILY | 521 | 781 | 261 | 3.19E-66 | ||
| Gene3D | 603 | 756 | 154 | 1.60E-27 | ||
| CDD | 606 | 730 | 125 | 5.76E-27 | – | |
| Pfam | 609 | 722 | 114 | 3.80E-17 | ||
| ProSiteProfiles | 612 | 773 | 162 | 19.014 | ||
| SMART | 638 | 722 | 85 | 1.90E-22 | ||
| PANTHER | 814 | 850 | 37 | 3.00E-293 | – | |
| PANTHER | 814 | 850 | 37 | 3.00E-293 | – | |
| Coils | 838 | 858 | 21 | – | – | |
| Pfam | 842 | 902 | 61 | 6.00E-19 | ||
| SMART | 842 | 905 | 64 | 1.80E-18 | ||
| PANTHER | 869 | 882 | 14 | 3.00E-293 | – | |
| PANTHER | 869 | 882 | 14 | 3.00E-293 | – | |
| PANTHER | 898 | 972 | 75 | 3.00E-293 | – | |
| PANTHER | 898 | 972 | 75 | 3.00E-293 | – | |
| MobiDBLite | 905 | 953 | 49 | – | – | |
| SMART | 915 | 1071 | 157 | 1.40E-71 | ||
| Pfam | 937 | 1068 | 132 | 3.20E-59 | ||
| Pfam | 1081 | 1114 | 34 | 1.60E-06 | ||
| MobiDBLite | 1146 | 1178 | 33 | – | – | |
| MobiDBLite | 1342 | 1425 | 84 | – | – | |
| PANTHER | 1362 | 1381 | 20 | 3.00E-293 | – | |
| PANTHER | 1362 | 1381 | 20 | 3.00E-293 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj1g3v1820910.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1820910.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.